KEGG   Oncorhynchus mykiss (rainbow trout): 110497679
Entry
110497679         CDS       T07259                                 
Symbol
sec23a
Name
(RefSeq) protein transport protein Sec23A
  KO
K14006  protein transport protein SEC23
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110497679 (sec23a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110497679 (sec23a)
Membrane trafficking [BR:omy04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    110497679 (sec23a)
SSDB
Motif
Pfam: Sec23_trunk Sec23_helical Sec23_BS zf-Sec23_Sec24 Gelsolin
Other DBs
NCBI-GeneID: 110497679
NCBI-ProteinID: XP_021429629
Ensembl: ENSOMYG00000037008
LinkDB
Position
19:complement(32591472..32618035)
AA seq 765 aa
MATFPEFIAQNEERDGVRFSWNVWPSSRLEATRMVVPVASLFTPLKERPDLPPIQYEPVL
CSRVTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISDVNQPAELLPQFSTIEYV
VQRGPLMPLVFLYVVDTCMEDEDLQALKESLQMSLSLLPPTALVGLITFGRMIQVHELGC
EGISKSYVFRGTKDLNAKQLQEMLGLTKPTAAQAGRGPQAPQAPLSNRFLQPVQKIDMNL
TDLLGELQRDPWPVTQGKRPLRSLGSAMSIAVGLLECTFPNTGARIMTFIGGPATQGPGM
VVGDELKAPIRSWHDIEKDNAKFMKKGTKHYEALASRASTNGHIIDIYACALDQTGLLEM
KCCSNHTGGYMVMADSFTTSLFKQTFQRVFTKDVSGAFKMAFAGTLEIKTSREIKISGAI
GPCVSLNAKGPCVSENEIGTGGTSQWKICGLDHNTTLAVYFEVVNQHNAPIPQGGRGAVQ
YVTQYQHSSGQKRIRVTTTARNWADAGTQIQTIAASFDQEASAILMARLAVYRAETEEGP
DVLRWLDRQLIRLCQKFGDYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDES
SYYRHQFMRQDLTQSLIMIQPILYAYSFNGPPEPVLLDSSSILPDRILLMDTFFQILIYH
GETVSQWRKAGYQELPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLS
KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq 2298 nt   +upstreamnt  +downstreamnt
atggcgaccttcccggagtttattgcacagaatgaggagcgtgatggggtgcgcttcagc
tggaatgtctggccctctagtcgtctggaggccacccgcatggtcgtccccgttgcctct
ctgttcacccccctgaaagagcggccagatctgccccccatccagtatgagcctgtgctg
tgtagcagggtgacctgccgcgctgtcctcaaccccctctgccaagtggattacagagcc
aaactgtgggcttgtaacttctgctatcagcgaaatcagtttcctcctacctatgctggg
atatcagatgtcaaccagccagctgagctgctgccacagttctccaccattgaatatgtg
gtccagagaggtcccctgatgccgcttgtcttcctgtatgtggtggacacctgcatggag
gacgaggacctgcaggctctgaaagagtccttacagatgtccctatccctgcttcctcct
acggccctggtgggcctcatcacctttggacgcatgatccaagtccacgagctgggctgc
gagggcatctccaagagctatgtcttcaggggaaccaaagacctcaatgccaaacaattg
caggagatgctggggttgaccaagcccactgctgcacaggcaggacggggaccacaagct
ccacaggcccccctctccaacagattcctccagccagtccagaagattgacatgaacctg
acagacctgcttggagagctgcagagagatccctggcctgtcactcagggaaaacggccc
ctccgctcgttaggatcagccatgtccatcgctgttggcttgctggagtgcaccttccct
aacactggggcacgcatcatgaccttcatcggtgggccagccactcagggcccaggcatg
gtggtaggagatgagctgaaggcccctattcgctcctggcatgacattgagaaggacaat
gccaagttcatgaagaaggggaccaaacattatgaggcgttggcgagccgtgcttccacc
aatggccatatcatagacatctatgcatgcgctctggaccagactggactgctggaaatg
aagtgttgttccaatcacactggaggctacatggtgatggcggactctttcacaacctca
ctattcaaacaaaccttccagagggtttttaccaaagatgtgtctggagccttcaagatg
gccttcgcaggcactctggagataaagacatctcgagagatcaagatttcaggagccatc
gggccatgtgtgtcattaaatgccaaaggaccgtgtgtatctgaaaatgaaattggaaca
gggggcacctctcaatggaagatctgtggtcttgatcataacaccactctggcagtgtac
tttgaggtggtcaatcagcataatgcacctattccccaggggggccgaggggcggtccag
tatgtcacacagtaccaacactccagtggacagaaacgcattcgagtcaccaccaccgcc
agaaactgggcagatgcagggacccagatccagactattgcagcatcatttgaccaggag
gcttcagccatcctgatggctagactggctgtgtaccgcgctgagaccgaggagggccct
gatgtgcttcgctggctggacaggcagctcatccggctgtgtcagaagtttggagattat
cataaggatgatcccaactctttccgcttctcagaaaccttttctctctatccccagttt
atgttccacctaagaagatctcctttcctgcaagtgttcaacaacagcccagatgagagc
tcatactacagacaccagttcatgcgtcaggacctgacccagtctctcatcatgatacaa
cccattctctacgcctactccttcaacgggcccccagagcctgtgttgctggacagcagc
agtatccttcctgatcgcatccttctcatggacaccttcttccagatcctcatctaccat
ggagagactgtgtctcagtggcgtaaggcaggctaccaggagttgccagagtacgagaac
ttccgccacctgctgcaggctcctgtggacgacgcccaggagatcctccacagccgcttt
cctatgccccgctacatagacacagagcacggcggatcacaggctcgtttcctgctatct
aaagtaaacccatcacaaacccacaacaatatgtatgcatggggccaggagtcaggtgct
ccgatcctgacggatgacgtcagtctccaggtgttcatggaccacctgaagaagctggct
gtgtccagcgcagcctga

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