Oncorhynchus mykiss (rainbow trout): 110502777
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Entry
110502777 CDS
T07259
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110502777
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110502777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
110502777
NCBI-ProteinID:
XP_036816359
Ensembl:
ENSOMYG00000047051
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All DBs
Position
23:complement(41305863..42045443)
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AA seq
391 aa
AA seq
DB search
MDNPSWAETKPGTGLCKQQGTIALFGNVVYSGLLNEHIWHFGIPIVTRLGNQEAPAPPEA
MAQPYPPAQYPPPPQNGIPAEYTAPHPPHPHPPADYTGQSAVAEHALTLYAATQTHSEQT
GNENNTPTLTATTVSQAEEVAQTEGSHQLHLQQCDSSEKQQPKRLHVSNIPFRFRDPDLR
QMFGQFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATAR
VMTNKKVSNPYTNGWKLNPMVGAVYGPELYAVAGFPYPSTGATVAYRGAHFRGRGRAVYN
TFRAAPPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPAATAATAYSDSYGRVYATAD
PYHHTIGPAATYSVGTMASLYRGGCSRFTPY
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggataacccaagctgggcagaaaccaaaccaggaactggcttgtgtaagcagcaggga
accattgctctttttggcaacgtggtgtacagcggcctgctcaacgaacatatctggcat
ttcgggatacccatcgtcaccagactgggtaaccaagaggcaccagcccctcctgaagcg
atggcccagccctacccaccagcccagtacccccctcccccccagaacggtatcccagcg
gagtacaccgccccccaccctcctcacccccacccgccggcagactacacggggcagagt
gcagtggctgagcacgccctaacgctgtacgcagccacacagacacacagcgaacagacc
ggcaacgagaacaacacacccaccctcaccgccactacagtatcgcaggcagaagaggtt
gcgcaaacagagggctcccatcagctccacctgcagcagtgtgattcatcagagaagcag
cagcccaaacggttacatgtctccaacatccctttccgcttcagagacccagacctcagg
caaatgtttgggcaatttgggaagattttagacgtggaaataatttttaacgagcgaggt
tccaagggttttgggtttgtaacatttgaaacgagtgcagatgcggaccgtgcacgggag
aaactaaatggtacaatcgtagagggacgcaaaatagaggtcaacaacgcaacagcacga
gtaatgacaaacaaaaaggtgtcaaacccttacacaaacggctggaagctgaaccccatg
gtgggagctgtctatggtcctgaattgtatgcagtggcaggttttccctaccctagtaca
ggagcgacagtagcctatcgcggagctcatttcagaggaagggggcgggccgtctacaac
acattccgcgccgcgcccccacccccacccattcctgcctatggagctgttgtttaccag
gacggcttctatggtgcagaaatatacggaggttatgcagcatacagatacgcccagcca
gcagccacagctgcaaccgcatacagcgacagttacgggagagtctatgcaacagcagac
ccatatcaccacacgattggtcctgcggccacgtacagtgtgggtactatggctagccta
tacagaggaggttgcagtcgcttcactccctactag
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