Oncorhynchus mykiss (rainbow trout): 110503833
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Entry
110503833 CDS
T07259
Name
(RefSeq) tripartite motif-containing protein 3 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110503833
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110503833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
Filamin
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_4
Invasin_D3
zf-ANAPC11
Prok-RING_4
Med9
Baculo_PEP_C
NPV_P10
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
110503833
NCBI-ProteinID:
XP_036817202
Ensembl:
ENSOMYG00000021050
LinkDB
All DBs
Position
24:complement(15107379..15148479)
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AA seq
772 aa
AA seq
DB search
MSVAMAKRETGSTSPVVRQIDKQFLVCSICLDHYHNPKVLPCLHTFCEKCLQNYIPPQSL
TLSCPVCRQTSILPEKGVAALQNNFFITNLMEVLQRDPECSPPEACSVLESVSAAAACQP
LSCPNHEGKVMEFYCESCETAMCLECTEGEHREHVTVPLRDVLEQQKAALKTQLDAIRNR
LPQLRAAIELVGEISKQLTDRKNEAVTEISSTFEELERALHLRKTTLITDLENICCTKQK
VLQAQLSSLLQGKDNIQSCSSFTEQALSHGSATEVLLVQKQMGERVSALARHTYPEQPHE
NGHLDCQVETEGLRRSIQNLGVLITTGAIGHTSVATGEGLRHTLVGQHTSVTVTTKDKDS
ELVKTGNAALRAEIMSVDGAVTTETEVVDNKNGTYEVGYTMRSEGEFSFSLLLYDQPVRG
SPFRLRAVKPSDVLQSPDDVKRRVKSPSGTGGHIRQKAVRRPSSMYSTTKKKENPIEDEL
IYRVGTRGRDKAEFTNLQGISTSSNGRIVVADSNNQCIQVFSNDGAFKLRFGVRGRSPGQ
LQRPTGVTVDMNGDIIVADYDNRWVSIFSSDGKFKSKIGAGRLMGPKGVAVDRNGHIITV
DNKACCVFIFQANGKLVTKFGARGTSDRQFTEKSGTNISLEPKLSKSGPAFSPHFVAINN
KNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSR
IQVFDSSGSFLSYINTTADPLYGPQGLSLTSDGHVAVADSGNHCFKVYRYLQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgccatggcgaagcgtgagacgggcagcaccagcccagtggtccggcagata
gacaaacagttcctggtctgcagcatctgtctggaccactaccacaaccctaaagtcctg
ccctgcctacacaccttctgtgagaaatgcctacagaactacatcccccctcagtccctg
acactatcgtgtcccgtgtgtcgtcagacgtccatcctgccagagaagggcgtggccgcg
ctacagaacaacttcttcataaccaacctgatggaggtgctgcagagggacccagagtgt
tctcctccagaggcctgtagtgtgctggagtcagtcagtgcagctgccgcctgccagccg
ctctcctgccccaaccacgagggcaaggtgatggagttctactgcgagtcgtgtgagact
gccatgtgtttggagtgtactgagggagagcacagggaacatgtgactgtccctctgaga
gatgtcttggagcaacagaaagcagccctgaagacccagctggatgccatacgcaacagg
ctgccccagctgagggctgctatagagctggtaggggagatctccaagcagctgactgac
aggaagaacgaggcggtgacagagatcagcagtacctttgaggagctagagagggcgcta
cacctcaggaagaccaccctcatcactgacctggagaacatctgctgcaccaagcagaag
gtgctccaggcccaactctcctctctcctgcagggtaaggacaacatccagagctgcagt
agttttacggagcaggctctgagccatggcagtgctacagaggttctgctggtccagaaa
cagatgggggagagggtcagcgccctggcccgacacacctacccagaacagccccatgag
aatggccatcttgactgccaggtggagacagagggtcttcgtcgttctatccagaacctg
ggcgtgctcatcaccacgggagccattggccacacctccgtcgccacgggagagggacta
cgccacacactggttggccagcacaccagcgtcacagtgacgaccaaggataaggacagc
gagctggtaaagacaggcaacgcggcgctgcgggccgagattatgtcggtggacggggcg
gtaaccacggagacggaggtggtggataataagaatgggacgtatgaggtgggctatacc
atgcgctctgagggggagttctccttctctctcctcctatacgaccagccggtcaggggc
agtccgttccgtctgcgtgcggtcaagccctcagacgttctgcaatctccagacgatgtg
aagaggagggtgaagagtcctagtgggacggggggccacatcagacagaaggctgtgagg
agaccctcaagtatgtacagcaccaccaagaagaaggagaaccccatcgaggatgaactc
atctacagagtcggaactagagggagagataaagcagagtttacaaacctccagggaatc
tccacctccagcaacggacgtatcgtagtggctgacagcaacaaccagtgtatacaggtg
ttctccaacgatggggcattcaagctgaggtttggggtcaggggtcggtcgccggggcaa
ctgcagcgccccacgggggtcaccgtggatatgaacggtgacatcattgtggccgactac
gacaaccgctgggtcagcatcttctcctccgacgggaagttcaagagtaagatcggggcg
ggtcgtctgatgggccctaaaggagtggcggtggacaggaacggacacatcatcaccgtg
gataacaaggcctgctgtgtgttcatcttccaggccaatgggaagctggtcactaagttt
ggagccagggggacatcagacagacagttcacagaaaaaagtggtacaaacatttcactg
gaacccaagctgagtaaatctggccctgcgttcagtccccactttgtggcgatcaacaac
aaaaatgagattgtggtaacagacttccacaaccattcagtgaaggtgtacagtgcagac
ggggagttcctgtttaagtttggttcccatggcgaggggaacggacagttcaatgccccg
acaggcgttgccgtggacgccaacgggaacatcattgttgccgactgggggaacagcaga
atacaggtgtttgatagttccgggtcgttcctgtcctacatcaacaccacagcagaccct
ctctatggtccacagggcctgtctctcacatctgatggacacgtggctgtggctgactct
ggcaaccactgcttcaaggtttaccgctacctgcagtag
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