Oncorhynchus mykiss (rainbow trout): 110504515
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Entry
110504515 CDS
T07259
Name
(RefSeq) THO complex subunit 3 isoform X1
KO
K12880
THO complex subunit 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110504515
09122 Translation
03013 Nucleocytoplasmic transport
110504515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110504515
03041 Spliceosome [BR:
omy03041
]
110504515
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110504515
Spliceosome [BR:
omy03041
]
Complex C
Other components
EJC/TREX
110504515
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110504515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
RMC1_N
NBCH_WD40
eIF2A
PD40
Peptidase_S9_N
Coatomer_WDAD
Nup160
DPPIV_N
IKI3
Cytochrom_D1
YNCE
Motif
Other DBs
NCBI-GeneID:
110504515
NCBI-ProteinID:
XP_021438945
Ensembl:
ENSOMYG00000036307
LinkDB
All DBs
Position
31:8153908..8157546
Genome browser
AA seq
322 aa
AA seq
DB search
MASKYYQEMQESFRNNNKSREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHGDSVDQLCWHPTNPDVFVTASGDKTIRIWDVRTTKCTATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDVKSHRSRAEEQFKFEVNEISWINDNNMFFLTNGNGCINIL
SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWTVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAYACDDK
EGKYDNNRESGTVKLFGLPNDS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaaatattatcaagagatgcaagagagttttagaaataacaacaaaagcagg
gaattccctgcgcatagtgctaaagtccattcagtagcatggagttgcgacggcaggagg
ttggcatctgggtcttttgataaaacagcaagcgtatttgttttggaaaaagaccgtttg
gtgaaggagaacaactacagaggccacggagacagtgttgatcagttgtgttggcatcct
accaacccagacgtgtttgtcactgcatcgggggacaagaccatacgcatctgggacgtc
agaacaacgaagtgcacggctactgtcaacactaaaggggaaaacatcaacatctgctgg
agtcccgacggccaaacgatagccgttgggaacaaggatgatgtggttaccttcatcgac
gtcaaatcacaccggtcacgagctgaggagcagtttaagtttgaagtcaacgagatctcg
tggattaatgacaacaacatgttctttctcaccaatggaaacgggtgcatcaacatcttg
agttaccccgagctgaagcccatccagtcgatcaacgcccacccctccaactgcatctgc
atcaagtttgaccccacggggaagtactttgccacaggaagtgcagatgccctggtcagt
ctgtggaccgttgaagaactggtctgtgttcgctgtttctccaggttggactggccagtg
agaacattgagtttcagccatgatgggaagatgctggcttcagcctccgaggaccacttc
atagacatagcagaggttgaaacaggagagaagctgtgggaggtccagtgtgagtctcct
acgttcacagtagcctggcatcctaagagaccgctgctggcctacgcatgtgatgacaag
gaagggaagtacgacaacaatagagagtctggcacagtcaaactgtttggattacctaat
gattcctga
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integrated database retrieval system