Oncorhynchus mykiss (rainbow trout): 110505258
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Entry
110505258 CDS
T07259
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein isoform X1
KO
K10896
fanconi anemia group M protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110505258 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110505258 (fancm)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
110505258 (fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
Motif
Other DBs
NCBI-GeneID:
110505258
NCBI-ProteinID:
XP_021440055
Ensembl:
ENSOMYG00000029807
LinkDB
All DBs
Position
25:complement(5765698..5833986)
Genome browser
AA seq
2145 aa
AA seq
DB search
MSGLNQMTLFQTWGASVPQKVSQTNNVKNSSGRRKTTQNSRGSTAASVKTQKRATGITLP
PRNTLWGEFDQGSTADSEVRDVEEVVVADDDDDDDEDDDDLMVVAVYEAEKSLQIDGNLG
QHSEHTTNVESTCLTQISSSGSTYYKDFPGLDSSSAKVWIYPTNYPIRDYQLKISEAALF
QNTLVCLPTGLGKTFIAAVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACYNVMGIPQTH
MAELTGSTQAQHRQELWRSRRIFFLTPQVLVNDLSRATCPALHVKCVVIDEAHKALGNHA
YCQVVRQLGSQTQQFRILALSATPGGDTNSVQQVISNLLISHIELRSEESPDIQAHSHQR
SLEKVVVPLGESLAGHQALYLQVLERFTGRLIQNRAMSHHDLRSLTKYQLILAREQFRKN
PPPHVMGAQQGVLEGDFALCISLYHGYELLLQMGLRSLFLYVQGIMDGTKEKSRARNELQ
RNATFMDLYQEMAAMFVKPTGPEEPFIYSHPKLQKLEEVVLGHFKTWAESSSTGSGPQEV
STRVMIFSSFRESVQEIAAMLNRHLPLVKVMTFMGQASAGKGVKGFTQKEQLEVMRMFRE
GGFNTLVSTCVGEEGLDIGEVDLIVCFDAQKSPIRLVQRMGRTGRKRQGRIVVILAEGRE
ERTYNQSQSNKRKVYKSIVGNSHSFHMFPHNPRMLPDGVHPALHKMHITCGQFDHRESSG
RLAGGWRGRRSHSLEGQLGHQESVKKDGFLSPSELTHWESTMKLGEGEAPPILRRSRFLS
KQEGSPPRVELLSSGPTRELSLWEWRHWQNQPFPTHIVDHSNRCHHFTKVMELIDGLRQE
EGESIYELELLPHLHKADVIGLTEEAQQEKSTKGKKQKEGEMTKSRTKMANLSHKQKTSC
LSSADLDRVELKKEVQRESISKAETTLVSPWTLIKNRVPSECHKEVTHDLRDHPGLWPLS
STGDQRIMDMDFDCIILDNESENSEVNSPRDLESESVNCIAAVEQIDLNQLTSIADREPK
SDEDSELEALFYLPKWDAAVPKLQPLRQKLESLRVILVNVTELLSRSPPALHFDLDSPQF
DPGPTPFTTKDCSHTLPVEPLDELLDVGQTFHVNFSLEVDEDFDDPASQSPNVDLDVGSL
DCESHCEPPHQQHSPSSPITVPAESMGRESALGSPSWDEVFEDDSNDIKEDDMDDKADFK
PPCHPTQLKARHSKTNLDESMDLFGDDGTFLQMTIPDIPTPENVSIRIPSPLKAPEREWL
IGSSKSVTETKMVYQVKPSCSHASPVAQQEPAQDFENFVCSQDLFSVNFDLGWEEDEGDT
EAAPSQFPSKTSPHGSKKQEAPLSSTVNEPKISGSSTPPFSFHRKSVSTPLTACLGRKRA
DTSALASPQTSPLTFKSGALFSPIPTLGPRRVLLPGPSTTPSTSFSFLKRKYQGTLQNAQ
TPKVQAGDPGNGSIEMGHSLSHKSILDPPHPGLCTSDSEEEVITRKRVHHHVKANPLSSP
VSMLLSDVDSPLQVTRKSKHAVARISDESEGEGEAMSDDDFQNTSVRQPRAPPRVAVKPS
ASHGKAKQAVQHHHRGARHFLDEEAALSEGGEVSSDEEDGEEQNRSLEGFVVSNTQCSQG
INDSEMQGVYLKSVRSPAVAGKFKMIYKLHPNMDIFSQVPELDETYAEDSFVVRASDEEE
LGEEDEEVPLELIYEDSFVEGRRQYPTRRKALIRNIRAQAGSGPATLDKRAADPQPNPAG
KNKRSRIVHLEDSSSEEEVEKSRHGVKAEGVAAICRLSELQQQNDGVFKAPRQQVPPGGS
TRASTASCVVGPRVLSGASMNSVMEPSAPSGTSRTSSVSSVRGPREEQQEERCRQRLHQQ
ALLSEELDFEQSESLLLSSKQPQATSSTSSAPHAQSSFGQAATLSKPPASSSNPSGLVAV
LVDSRCITACVDVVSSLRQRCAVAAHVCSLDGCDFVVSNRMAVERQCQSELAGMPNRKRL
VERVTSLQSLFERVCLIVEKDRTKPSEASRPFQPTRYYDSTLASLVRAGVRLLVSRGPEE
SATLLAELARMEQRKGQAISVPLEVKGHRQQALLFYRTLPCVSYVNALNMSHSFRSVGHL
VNSSIEALQKGACVSRPRAEEIYRCLRYSCDTTRMTKNTPGKNNL
NT seq
6438 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtctgaaccaaatgactttgttccagacgtggggagcatctgttccacaaaag
gttagtcaaacgaataatgtaaagaattcttccggacgacgaaaaacaacgcaaaacagc
aggggcagcacagcagcctcagtcaagactcagaaaagggcgactggtataactttgccg
ccccgtaacacgctatggggtgaatttgatcaggggtccacagctgacagcgaggtgaga
gatgtcgaggaggttgttgttgctgatgatgatgatgatgatgatgaagatgatgatgat
ttaatggtagttgctgtttatgaggcggaaaagtctttgcaaattgatggaaaccttgga
caacatagtgaacacacaacaaatgttgagagcacttgtctcacacagataagctcaagt
ggatcaacatattacaaagacttccctggccttgacagctcctctgcaaaggtatggatc
taccccaccaactatcccataagggactaccaactaaagatatcggaggcggctttattt
cagaatacgctggtatgcctccccactggcctgggcaagactttcattgctgctgtggta
atgtacaacttttatcgatggtatccatctggaaagatagttttcatggcaccaacaaaa
cccctggtggcacaacaaatagaagcgtgctacaatgtgatgggtattccacagacacac
atggcagagttgacagggagcacgcaggctcagcataggcaggaactgtggaggtccagg
cgcatcttcttcctcactccccaggtgttggtgaacgacctgtctcgagccacctgcccc
gcgctgcacgtcaagtgtgtggtgattgacgaggctcacaaggcactggggaatcatgcc
tattgccaggtggtgagacagttggggagccagactcaacagtttcgcatcctggcactc
agcgccacgccaggtggagacacaaattcagtgcagcaagtcatatccaacctgctgatc
tcccacattgagctgcggtctgaagagagccctgacatccaggcccactcccaccagcgc
agcctggagaaggtggtggttcccttgggggagtcgctggccgggcaccaggccctctac
ctacaggtactggaacggttcacgggccgtctgatccagaacagggcgatgtctcaccat
gacttgcgctccctcaccaagtaccagctcatcctggcccgggaacagttccgcaagaac
cctccgccccacgtcatgggggctcagcaaggggttctggagggggactttgccctgtgt
atcagcctgtaccatggctacgagctgctgctccaaatgggcctgcgctccctcttcctc
tatgtccagggcatcatggatggcaccaaagagaagtctcgagccaggaacgagctacag
cgcaacgccaccttcatggacctgtaccaggagatggcggccatgtttgtaaagcccacc
ggccccgaggagcccttcatctacagccaccccaaactgcagaagcttgaggaggtagtg
ctagggcactttaaaacatgggctgagagctccagcactggctctgggccccaggaagtg
agcacacgtgtgatgatcttttcgtcgttccgggagagtgtgcaggagattgccgccatg
ttaaatcgccacctgcccctggtcaaagtcatgacgtttatgggccaggcctcggcaggg
aagggggtcaaagggttcacccagaaggagcagctggaggtgatgcggatgtttcgggag
gggggcttcaacaccctggtgtccacctgcgtgggtgaggaggggctggacatcggcgag
gtggacctcatcgtgtgcttcgacgcccagaagagtcccatccgcctggttcagcgcatg
ggccgcaccggacgcaaacgccagggtcgcatagtggtcatcttggccgagggacgagag
gagagaacctataaccagagccagagcaacaagcgcaaggtgtacaagtctatcgtgggg
aacagccacagtttccacatgttcccccacaacccccgcatgctgcccgacggggtgcat
cccgccctgcacaagatgcacatcacctgtggccaatttgaccaccgggagagcagcggg
cggctcgccgggggttggagggggcgcaggtcccactccttggagggccaactcgggcac
caggagagtgtgaagaaggatggcttccttagcccctctgagctcactcactgggagtct
acgatgaaactgggggagggggaggctccacccattctaagacggtcccgcttcctctca
aaacaggaaggctcgccacctcgggtggagctgctctccagcgggccaaccagggagctg
tctctgtgggaatggagacactggcagaaccagcccttccccactcacattgtggaccac
tccaaccgctgccaccacttcaccaaggtcatggagctcattgacggcctgcgccaggaa
gagggtgaaagcatatatgagttggagctgctgccccacctccacaaagcagatgtcata
ggcctcacggaggaagcacagcaggaaaagtccaccaaaggaaagaagcagaaagaggga
gaaatgactaaatccagaaccaaaatggccaacctgagccacaagcagaagacttcctgc
ctttcctcagctgacctagaccgtgtagaactcaaaaaggaagtgcagagggaaagcatt
tctaaagcagagacaaccttagtctctccatggaccctgataaagaaccgagtcccttca
gaatgtcacaaggaggtgactcatgacctccgagatcacccaggcctctggccactctcc
tccacgggtgaccagcgtatcatggacatggattttgactgtatcatactcgacaacgag
agtgaaaattcagaggtcaattctccaagggatttggagagcgaatcagtgaactgcatt
gctgctgtagaacagattgacctcaatcagttgacctcaattgcagaccgtgaacccaag
tcagatgaagattctgaactggaggctttgttttacttgcccaaatgggatgctgctgtc
cccaagttgcagcccctgagacagaagttagagagcttgagggtcattctagtcaacgtg
acagagcttctgtctaggtctcctccagctttgcactttgacctggacagccctcagttt
gaccctgggcccacccctttcaccaccaaggactgttcacatacacttccggttgaacct
ctggatgaactcctggatgtgggtcagacattccacgtgaatttctccctggaagtggat
gaggactttgatgatcctgcttctcaatctcccaatgttgatttagacgttggttctcta
gactgtgaaagccattgcgaaccacctcatcagcagcactccccttcatcacccattact
gtgccagcagaaagcatgggtagggaaagtgcccttggcagccctagctgggatgaggtc
tttgaggatgacagcaatgacataaaggaagatgatatggatgataaagcggacttcaag
ccaccatgtcatcccacccagcttaaagccaggcactctaaaaccaacctggacgagagc
atggacctgtttggagatgacggcaccttcctccagatgaccattccggacatccctacg
ccagagaacgtcagtatccgaatacctagccccctgaaggctccggagagggaatggtta
atagggtcaagtaaaagtgtgacagaaacaaagatggtgtatcaggtcaaacctagttgt
agccatgcttctcctgtagcgcagcaggaacctgctcaggactttgagaactttgtctgc
tctcaggatttgttctctgtcaactttgacttgggctgggaggaggatgaaggggacaca
gaggctgctcctagtcagttcccctcaaaaacttcaccccatgggtccaaaaaacaggaa
gcacccctttcctccacagtgaatgagccaaaaatctctggctcatccactccccccttt
agtttccacaggaagagcgtgtccacacccctgacagcctgtctgggaaggaagagggca
gacacctctgctctggcttcgcctcagacctctcctctgacctttaagagcggagctctg
ttctcaccaatccccacattaggaccgaggcgagttctcctgcctggtccttccaccacc
ccatccacttcgttctcattcttaaagaggaaataccaggggaccttacagaatgcccag
actcccaaagttcaggcgggggacccaggaaatggttcaatagagatgggacacagtttg
tctcacaaatccatcttggacccccctcatccaggcctgtgcaccagtgacagtgaggag
gaggttatcacccgtaagcgggttcatcatcatgtcaaggcgaaccccttgtcttctccc
gtgtcaatgcttctcagtgatgtggattctcctttacaagtgaccaggaagtcaaagcat
gcggtggcacgcatttcagatgagagcgagggggagggggaggcgatgtctgacgatgac
ttccagaatacctctgttcgacagccaagagcgcccccccgtgtggctgtgaaaccatcc
gcgtcgcatgggaaagctaagcaggccgtgcagcaccaccaccgaggagcccgtcacttt
ctggacgaggaggcggcgctgtccgaggggggggaggtgtcatctgacgaagaggacggt
gaagagcagaaccgctcactggagggcttcgttgtgagcaacacccagtgctcccaggga
atcaacgattctgagatgcagggggtttacctaaagtcagtgagaagccctgctgtggct
ggcaagttcaaaatgatctacaagctacaccccaacatggacatcttctctcaggtgcct
gagctggacgagacatacgcggaggacagctttgtggtgagggccagtgatgaggaagag
ctcggcgaggaggatgaggaggtcccattggagcttatctacgaggactcgttcgtggag
gggaggaggcagtaccccaccagacgcaaggcgctgatccgaaacatcagggctcaggct
gggagcgggcctgccactctggacaagagggctgctgaccctcaacctaatcctgctggg
aaaaacaagcgctcccgcatagtgcatttggaggactccagctcagaagaagaagtggag
aaaagtagacatggtgtgaaagctgaaggtgttgctgccatctgcaggctatctgagtta
cagcaacagaatgacggggtgtttaaagctccacggcagcaggtgccccctggtggatcc
accagagcctccacagcaagctgtgtggtggggcctagagtcctcagtggagcctctatg
aactctgtgatggagcctagtgccccaagtggaaccagcaggacctcctcagtgagctcc
gtgaggggacctagagaggagcagcaagaagagaggtgtcgccagaggctccatcagcag
gccctcctgtctgaggagctggactttgagcagtcggagtctctgttgctctcaagtaaa
cagccacaggctacctcctccacctcctcagcaccccacgcccagagctccttcggtcag
gctgccactctaagcaagccccctgcctcgtcatcgaacccatcgggccttgtcgctgta
ctggtggacagccgctgtatcacagcctgcgtggatgtagtctccagcctgcgccagcgt
tgcgctgtcgcggcccacgtgtgctcgctggacggctgcgacttcgtggtcagtaaccgc
atggcagtcgagaggcagtgccagtcggagttggccgggatgccgaaccgcaaacggctt
gtggagagggtgaccagtttgcagagcctatttgagcgggtctgtctcatcgtagagaag
gaccgcaccaaaccaagtgaagcttcccgtcctttccaacctacacgctactacgacagc
acactggccagtttggtgagggcaggcgtccgactcctggtgagtagggggcctgaggag
agcgccaccctactggctgaactggcccgaatggagcagaggaagggccaggctattagc
gtgccattagaggtcaaaggtcaccggcagcaggcgctactcttctaccgaacgctgccc
tgtgtcagctatgtcaatgccctcaacatgagccacagcttcagatcggtgggccacctg
gtcaacagctctatcgaggctctacagaagggggcgtgtgtgagccgccccagagccgag
gagatctaccgctgcctacgctactcctgtgacaccacccggatgactaaaaacacaccc
gggaagaacaacctttag
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integrated database retrieval system
