Oncorhynchus mykiss (rainbow trout): 110508267
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Entry
110508267 CDS
T07259
Name
(RefSeq) macrophage mannose receptor 1
KO
K06560
mannose receptor, C type
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110508267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110508267
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
110508267
04090 CD molecules [BR:
omy04090
]
110508267
04091 Lectins [BR:
omy04091
]
110508267
Membrane trafficking [BR:
omy04131
]
Endocytosis
Phagocytosis
C-lectin receptors
110508267
Pattern recognition receptors [BR:
omy04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
110508267
CD molecules [BR:
omy04090
]
Proteins
110508267
Lectins [BR:
omy04091
]
C-Type lectins
Group 6: Mannose receptor family
110508267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
Xlink
Chordopox_A33R
UL45
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
110508267
NCBI-ProteinID:
XP_036822046
LinkDB
All DBs
Position
28:complement(41906782..42137364)
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AA seq
1432 aa
AA seq
DB search
MTTIMITVLMLFIQTTLGAPETDGPFNLFNAESGIRQDLARWVSGGRLYYTNNRKCAGVS
GKTEGSTLVYSDCDEKSLLQQWECSNNTLLTLKGQTLYLHINDNNDLVLSRDTGPRSRWT
ISGTTDGPCSRTHRELFTIEGNAFGRPCQFPFLYKDQWYGDCTLVDSSVRRLWCAIETNY
QDNELWGNCPSKSTEHWHKNPVTDAFYQVNLHSALTWHQARTSCQQQGADLASITEPLEQ
TYLAGLCGRLHVPLWTGLNALEQDSGWQWISGKPLRYFRWDSGHPLSDPGHICGLVDPGQ
QSYWQSSLCSKKHGYVCQKDPPTSPVPPEVTGYCSSPWIPYAARCYLLQRTKKTWTEAQT
ECRKDGGDLASIHNIEQHSFVMSQLGYAAADELWIGMNDVKTPLLFEWSDQSPVTFTRWE
EAMPMEGNCVLVRGEQGRWATQVCDNQRGFICMKKSTSQPSGDQVDTNPGCKSHWTRHGS
FCYFVGPEIKTFDEAKETCKSSQSYLADVSSRLDNAFLISLVGSRPEQHFWIGLSNQNHI
DFFSWTNSNRVRYTHWNAQMPGSRQGCVAMTTGTLAGLWDVLSCTNQEKYICKHLAEGAG
PTPEPISPVPPRCHEGWFPVGSRNYCFKFFTGPRKDEKTWFEARDFCRVIGGDLLSIHSS
TDLQSMHHVHGGTSWIGLSAQDPNTGFAWTDGSPLSFQHWMEGEPNNYNGVESCAEMRNS
YWDEEGSWNDVNCEDYNDWLCEIPKGVTPLPHLSNTIPEYNVTEDGWLEYGGSQYYFNTE
VLAMENARHYCQQRHGDLVVINGLTENTFLWKKINKEQLGSHYIGLTVDLDRSFGWMDGT
PVVFQRWDDNQPNFKNNDENCVVMYSSMGFWHDYNCGTEMRSICERSGSPPVNSTVPPTA
PPTGGCPPEWVRYQSKCYKLIGYRVPCSWLEARSYCQSMGANLASIASRREQVFLTTQMT
SGATDLWIGLSNLNRDAFVWTDGQAVKYLNLDFIKTLSQMFPSLWFFHSQMYMDMLSSQA
SRCIVMASSSSILGKWEIRSCNDTHGFICQRKVDSGIPVPTPTMLPRGWVKLANDSYKVL
PQNRTWPEARMQCEAEEGQLASTLDELSAAYLELQALKLQTPLWIGLNRNETQGYFRWMD
GWPLSMDRWAQGEPSRDRPCVYLDVEGTWKTALCNHTYPSVCKQSPAVPPMVPPQYTGEC
IQEEQEENSGSNSPWFWLPFRGHCYSFVINHIEWADASTSCIRKGASLVSIEDPEELRFI
KSNVEILKDSYSSFWIGLYKTHLGRWKWLDQTVLDYMNWAEGQPQDSSYIYGYMLSSDGT
WSTAPRWDDKPYICKKSKVLPETPPTHVSLKAGQRRVYSGLAVVVVLATMCLMGLTALML
YKKTGRPLPSFTNPLVFSAGRSTFNNPLYTEPVTEVDPSMVDTSQLVNHMEA
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatcatgataacagtactgatgctcttcattcaaaccaccctgggggctcct
gaaacagacggtcccttcaacctcttcaatgcagaaagtggcattagacaggacctggca
cgctgggtgtcaggtggacgtctctactacaccaacaacaggaagtgtgctggggtttct
gggaagacagagggtagtacgctggtgtattctgactgtgatgagaagagcctcctccag
cagtgggagtgcagtaataacacactgctcacactgaaaggacagactctgtacctgcac
atcaacgacaacaatgatctggtgctgtccagagacacggggcctcggagtcgctggacc
atctctggaacaacggacggcccctgctcgaggacccacagagaactctttaccatcgaa
ggaaacgcatttgggcgtccctgtcagtttcctttcctgtacaaagaccaatggtatgga
gactgcaccttggtagactcctctgttagacggctttggtgtgccattgaaacaaactac
caagacaatgaactgtggggcaactgtccatccaaatctacggagcattggcataagaac
ccggtcacagatgcattctaccaggtgaacctccactctgctctgacctggcaccaggct
cggaccagttgccaacagcagggagcagacttggcctcaatcaccgaacccctcgagcag
acctacttagcaggcctgtgtggtaggctgcatgtgccgctgtggacggggctgaatgct
ctggaacaggacagtgggtggcagtggatcagtggaaagcctctccgctacttccgctgg
gactctggtcatcctctctctgatcctggtcatatctgtggactagtcgacccaggtcag
cagtcctactggcagagctccctgtgctccaagaaacatggctacgtctgtcagaaagac
ccacctacatcccccgttcccccagaagtgacaggttactgctccagtccgtggattccc
tacgctgccaggtgctacctcctccagcgtaccaagaagacctggacagaggctcagacg
gaatgtcggaaggacggaggcgacctggccagcatccacaacattgagcagcacagcttt
gtgatgtcacagctgggatatgcggccgctgacgagctgtggatcgggatgaacgatgtc
aagacgccactactgtttgagtggagcgaccaatcccctgtcaccttcaccaggtgggag
gaagccatgccgatggagggcaactgtgtactggtcagaggagagcagggcaggtgggct
actcaggtgtgtgacaaccagcgtggcttcatctgtatgaagaaatctacctcccaaccc
tcaggggaccaggtggacacgaacccaggctgcaaatcgcattggaccaggcatggctcc
ttctgctactttgtgggaccagagatcaagacctttgatgaggccaaagagacatgcaag
agctcacagtcatatctggcagatgtttctagcaggttggataatgctttcctgatcagc
ctggttgggtccaggccagagcaacacttctggatcggactctccaaccagaaccacatc
gacttcttcagctggacgaacagcaacagggtcaggtacacccactggaacgcacagatg
ccaggcagtcgacagggttgtgtggccatgacaacagggactctagctggattatgggat
gtgctgagctgcaccaatcaggagaagtatatctgtaaacacctggcagaaggagcgggg
ccaacaccagaaccaatttcacctgtccctcccaggtgccatgagggctggtttcctgtg
gggtctcggaactactgcttcaagttctttacagggcctcgcaaagatgagaagacctgg
tttgaggctcgggacttctgcagggtgattggaggagacctactcagcatccacagttct
acggacctccagtctatgcatcatgtccatggtgggacttcctggatcggtctgagtgct
caggatcccaacactggcttcgcctggactgatgggtcgccactgtccttccaacactgg
atggagggggaacccaacaactacaacggcgtggagtcctgtgctgagatgaggaattct
tactgggatgaagagggatcctggaacgatgtaaactgtgaggactacaacgactggctg
tgtgagatccctaaaggagtgaccccactacctcatctcagcaacaccatccctgagtat
aatgtgacagaggatggctggctggagtatggaggctctcaatattactttaatactgaa
gtgctggccatggagaatgccagacactactgtcagcagaggcatggggaccttgttgtt
atcaacggactaacagaaaatacatttctgtggaaaaagatcaataaagagcaattagga
agccattacatcgggctcacagttgatcttgatcgctcttttgggtggatggacggtacc
ccagtagtattccagagatgggacgacaaccagccgaacttcaagaacaacgatgagaac
tgtgttgtcatgtacagctccatgggtttctggcatgactataactgtggcactgaaatg
aggtccatctgtgagaggagtggttcccccccagtgaacagcaccgtgccccctactgcc
ccccccacaggaggctgccccccggaatgggtccgctaccagtctaagtgctacaaattg
attggataccgggtgccttgttcctggctcgaggccagatcgtactgccaatccatggga
gctaacctggcgtccatcgccagtaggcgggagcaagtgtttctgacgacccagatgact
tctggtgctactgacctgtggattggactgagtaacttaaaccgggacgcgtttgtctgg
accgatggccaggcagtcaaatacttaaacttggatttcatcaagacactgtcgcagatg
ttcccatcgctatggtttttccatagtcagatgtacatggatatgctttcctctcaggct
agtcggtgtattgtgatggccagttcctcctccatcttgggaaaatgggaaatcaggtcc
tgcaacgacacacacggcttcatctgtcagcgtaaagttgactcaggcatcccagtcccg
acaccgacaatgttacctagaggctgggtgaagctggccaacgactcctacaaggtgctg
ccccagaacaggacatggcccgaagcccggatgcagtgtgaggctgaggagggccagctg
gctagcaccctggatgaactgtcagcagcctacctggagctgcaggctttgaagctgcag
acaccactgtggattggactcaataggaatgagacgcaaggctacttcaggtggatggac
ggatggcccttgagcatggaccggtgggcccaaggcgagcccagcagagaccggccctgt
gtctacctggatgtggaaggcacctggaagacagccctttgtaaccacacctaccccagt
gtgtgtaagcagtccccagccgtcccgcccatggtcccaccccagtacaccggggaatgt
atccaggaggagcaggaggagaacagtggtagcaacagcccatggttctggttgcctttc
agagggcactgctacagcttcgtcattaaccacatagagtgggccgacgcctccaccagc
tgtatacgtaaaggggcgtctctggtgagcatcgaggatcctgaagaactccgcttcata
aagagcaacgtggagattctgaaagacagctactcctccttctggattggcctgtacaaa
acacacctaggtcggtggaagtggctggaccaaacagtgctggactacatgaactgggca
gagggacagcctcaggactcttcctatatctatggatatatgctatcctccgatgggacc
tggagcactgcccccaggtgggatgataaaccatacatctgcaagaagtccaaagttcta
ccagaaacaccaccaacacatgtgtctctgaaggcaggtcagaggcgtgtgtattcaggc
ctggcagtggtggtggtattggctaccatgtgtctgatgggcctcacagccttaatgctc
tacaagaagaccggccgtcccctgccctccttcaccaaccccctggtcttcagcgcaggc
cggagtaccttcaacaaccccctctacacggagcccgtcaccgaggttgaccccagcatg
gtggacactagccagctggttaaccatatggaggcttag
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