Oncorhynchus mykiss (rainbow trout): 110510636
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Entry
110510636 CDS
T07259
Name
(RefSeq) G patch domain-containing protein 1 isoform X1
KO
K13123
G patch domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110510636
Spliceosome [BR:
omy03041
]
Complex C
Other components
Complex C specific factors
110510636
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1604
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
110510636
NCBI-ProteinID:
XP_036837569
LinkDB
All DBs
Position
6:complement(96550200..96610542)
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AA seq
978 aa
AA seq
DB search
MASDSDSDGGFVTFGTPLEPLEEDEPLRKPVPLHEQTVKDEKGRYQRFHGAFTGGFSAGY
FNTVGTKEGWTPATFVSSRQQKAGRQNARPEDFMDEEDLGDHGIAPRQITTTADFASGRK
DVIRDKARAITSLSAPIPGDTVLEDLVAPARSSMGVELLRKMGWKDGQGVGPRVKRRLCK
QRADSATRAFGSASPPNGSSESQDEEDGEFLPENVTFAPKDVTPIDFTPKVDLHGLGYRG
LNPLAALRGGPGAGHINLFTMDSDRTNSLFGEDRKGHRRRGGVAGQGFGVGAMEDDDEDI
YHRDIMSNYDTVLGGEEPGDGLYGWTAPQQYNRTKKDHSKDAAYLGKILEGFTLASDKLE
TKTIFPPPNLPRDFRPVHYFRPVVDLSSVSPMVAQALQTSRGHMAQEEPSKGGRHQLDSA
QRRELLGEATLQGPSSVFDLLKVEDRERLSGLRRPSSDTSSGPRQPTPGEARAAVVAAGV
AAAAARASAQKALSSRFAPQAEQQQQEALSVWSGPTAQAQTGQTFKPFERTPHKQARYDL
YIDQLKQGDRDALELSLDPTMTEWERGRERDEFVRAALLYKPSSSSLSCRFTRGKQDDGV
EADTVEVTRDQENDVDDKQAAVKMKMFGKLTRDTFEWHPDNLLCKRFNIPDPYPGSGFVG
MPKVKRDKFSVFNFLTVSESPTASASPAPQGVKPSEPGKRSRWDVSGQAGDKERKEKDPV
SEFLSVARIEASGSGPEASTTDGPTTDPTVEPDTEQKDEEEEEEEEEESRPSMDLFKAIF
VSSSDEKSSSSSEGESEEEEEEKEEGVRSKAGTGPQISNQLNVNTTQPAPPVSAIPSQHP
DVVFKTPSGPAAVPPPRDQEMEEEEFGPRLPPPSSTLTVERRPSLTPSAKDDKHKKKCKE
KHKAKKHGKNKKDKKQKKKHKRHKHKGKQKKSSRKEESSDSSSEGSDGNSQDDGEEGGGV
STEELLRRLKSIRGKNLQ
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgacagcgacagcgacggaggttttgttacttttggaaccccattagaaccg
ctagaagaagatgagcctctgaggaagcctgtcccgctgcacgagcagaccgtgaaggat
gagaagggccgctaccagaggttccatggagccttcactgggggattctctgctgggtac
ttcaacaccgtgggcaccaaagaagggtggactcctgcaacctttgtttcatccagacag
cagaaagcaggcagacagaatgccaggccagaggacttcatggatgaggaggatctgggg
gaccacggcatcgcccccagacaaatcaccactacagctgactttgcctccggcaggaag
gatgtgatcagggacaaggccagagccatcacctctctttcagctcctatcccaggggac
actgtcctggaagacttggtggctccagctaggtcctccatgggggtggagttactgagg
aagatgggctggaaggacggccagggggttgggcccagggtgaagaggaggctgtgtaag
cagagagcagattctgcaacaagggcgttcggctcggcctcgcctcccaacggttcatcg
gaatcacaggatgaggaggacggagagttcctcccagagaacgtgaccttcgctcccaaa
gacgtgactcctatagacttcacccctaaagtggacctgcacggcctgggctaccggggt
ctgaaccccctggcggccctgaggggaggtccgggcgcgggacacatcaacctgttcacc
atggactcagacaggaccaacagcctgtttggagaggacaggaagggacacagacgcaga
ggaggagtggcaggacaggggtttggtgtgggtgcgatggaggacgatgacgaggacatc
taccacagagacatcatgtctaactacgacacggtgctgggaggggaggagcctggcgac
ggactgtacggatggaccgccccccagcagtacaacaggacgaagaaagaccacagtaaa
gacgctgcttatctgggtaaaatcctagaaggattcaccctggcctccgataagctggag
accaaaacaatcttccctcctcccaacctgcccagagactttaggccggtccactacttc
cgtccagtggtggacctgtccagcgtcagccccatggtagcccaggccctgcagacgtct
cgaggacacatggcccaggaagagccctctaaggggggtcgtcaccagctggactctgcc
cagaggagggagctgctgggggaggctacactgcaaggccccagctctgtgtttgacctg
ctgaaggttgaggacagagagagactctccggcctacggaggccctcctcagataccagc
tcaggccccagacagcccacccctggggaggccagagcagccgttgtggctgcaggggta
gcggctgcagcagccagagcctccgcccagaaggccctgtctagcaggtttgcaccccaa
gcagagcagcagcagcaggaagctctgagtgtgtggagcggcccaacggcgcaggcccag
acgggacagacattcaaaccctttgagaggacccctcataaacaggcccgatacgacctc
tacatagaccagctcaaacagggagaccgagatgccctggagttgagcttggaccccacc
atgacagagtgggagagagggagagagagggatgagtttgtccgtgccgctctcctctac
aagcccagcagctcctctctgtcttgtcgcttcaccagagggaaacaggatgacggtgtg
gaggcagacactgtggaggtgacacgagatcaggagaatgatgtggatgacaagcaggca
gccgtgaagatgaagatgtttggaaaactgaccagagacacgtttgaatggcaccctgac
aatctgctctgcaagaggttcaacatacctgacccctatcctgggtcagggtttgtggga
atgcccaaagtgaagagagacaagttctctgtgtttaacttcctgactgtatcagagagt
ccaacagctagtgcttcccccgctccacaaggtgtaaagccctctgagccagggaagagg
tccaggtgggatgtgtctggccaggctggggacaaggagcggaaggagaaggatccggtc
agtgagttcctcagtgtggctcgtattgaagcctctgggtcaggaccagaagcctctact
actgatggccctacaacggatcctactgtagagccagacacggagcagaaagacgaggag
gaggaagaggaggaggaggaggagagcaggccgtctatggatctgttcaaggccatcttc
gtcagttcatcagacgagaagtcttcctcttcttctgaaggagagagtgaggaggaggag
gaggagaaggaggaaggtgttcggagcaaggctgggactgggcctcagatatctaaccag
ttgaatgtcaacacaacccagcctgctcctcctgtgtcagctatacccagccagcaccca
gacgttgtgttcaaaacgcccagtggtcctgccgctgtccctccccctcgggaccaggaa
atggaagaggaggagtttggacctcggctgcctcctccttcctctacattgacagtggag
cgccgtccgtccctgactccctctgctaaggacgacaaacacaagaagaagtgtaaggag
aagcacaaagccaagaaacacggcaagaacaagaaggacaagaagcagaagaagaagcac
aagaggcacaagcacaaaggcaagcagaagaagagcagtaggaaggaggagtcatcagac
agcagctcagaggggagtgacgggaacagccaggatgacggagaggagggaggaggggta
tcaacagaagagctgctcagaaggttgaagagcatccgtgggaagaatctgcagtga
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