Oncorhynchus mykiss (rainbow trout): 110513114
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Entry
110513114 CDS
T07259
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110513114
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110513114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_6
Fib_alpha
zf-RING_2
zf-RING_10
Prok-RING_4
YscO-like
zf-RING_5
Wtap
U3snoRNP10
DUF445
Y1_Tnp
LMBR1
MAP65_ASE1
FapA
NBP1
Exonuc_VII_L
T3SS_basalb_I
Motif
Other DBs
NCBI-GeneID:
110513114
NCBI-ProteinID:
XP_036828113
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAQQGVLLDQDQLCCSVCLDLLKEPVTIPCGHSYCRSCIEGCWDQDDLKGVYSCPQCRET
FTPRPNLRKNNMLAELVEKLRKTGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLV
CLASYCETHLQPQYEFSALKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICLLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESFKRSAQSAVED
SDQIFTELIRSIERRSSEVKELIRAQENAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQRYLSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLHYSCQLTLDPNTAGTHLSLSEGNRKVTCTHQVQPYPVHP
DRFTNWCQVLCREGLSGRCYWEVEWSGDVVYTAVSYKDISRTGTNSGFGYNNKSWSLDYD
SDGYCFRHNNVETLVSGPQSSRLGLYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPG
FSLYYYNNTAELVKL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagttctgctggaccaggaccagttatgttgttctgtctgtctggat
ctactgaaggagccagtcactattccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgatctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgagctggtggagaaactg
aggaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcaatatgaattttctgctttgaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtctgctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacagtcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaatgctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgaactggagcagctctcacac
acagaggatcacatccatttcctccagaggtatctgtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacattattcctgtcagctcacactggacccaaacacagcaggcacacacctctctctg
tctgaagggaacagaaaggtgacctgtacacaccaagtccaaccatatcctgtccatcca
gacagattcaccaactggtgtcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggtgatgttgtttatacagcagtctcatataaagacatcagc
agaacagggacaaatagtggatttggatacaataacaagtcctggagtttagattacgat
agtgatggttattgtttcagacacaataatgttgagactttagtatcaggccctcagtcc
tccagattaggattgtacctggatcacaaggcaggtactctgtccttctacagtgtctct
gacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcctggg
tttagtctctattattataataatactgctgagctggttaaactgtaa
DBGET
integrated database retrieval system
