Oncorhynchus mykiss (rainbow trout): 110513354
Help
Entry
110513354 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47
KO
K12006
tripartite motif-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110513354
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110513354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
zf-RING_2
zf-RING_5
U-box
DUF6236
DUF6591
Motif
Other DBs
NCBI-GeneID:
110513354
NCBI-ProteinID:
XP_036843656
LinkDB
All DBs
Position
1:complement(86222196..86223952)
Genome browser
AA seq
431 aa
AA seq
DB search
MAEAFFEDRDSFSCSICLDILKDPVTTSCGHNYCMGCIEGCWDQDDLKGVYSCPECRQTF
VQRPVLNRNTLLAKVVEKLKHTALHAAPPAAPHADPPAAPHAAPPAAPPAHCYAGPGDVE
CDFCTGRKHKALMSCLACLVSYCETHLQPHYNFPALKKHMLVKASTQLQEKICSQHDKLL
EVYCRTDQQCICYLCTMDEHKGHDTVSAAAERTEKQKQVGEKQQKSQQRIQEREKEMQEL
RQAVDSLKLSAQAAVDDSERIFAELIRTMETRCSEVKELIRDQEKAEVSQSEGLLERLEQ
EVAELRRRDSELEKFSHTEDNIHFLQRFKDHSAPPVSEEMPAVILNQSRDFKTVMTSDLQ
EKLMLCCKEGVVEISAAVKAVHILQSAEPSTQAAASVAQYHRKYYQKYSFKDICVHCRKI
KMCHGPMGKCL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcattttttgaagatcgggattcatttagctgttcaatctgcttggatata
ctgaaggatccggtgactacttcctgtggacacaactactgtatgggctgtattgagggc
tgctgggatcaggacgatctgaaaggtgtttacagctgcccagagtgccgacagaccttc
gtccaaaggcctgttctgaacagaaacacgttgctggctaaagtggtggagaaactgaaa
catactgctcttcatgctgctcctcctgctgctcctcatgctgatcctcctgctgctcct
catgctgctcctcctgctgctcctcctgctcactgttatgctggacctggagatgtggag
tgtgatttctgcactgggagaaaacacaaagccctcatgtcctgtctggcgtgtctggtc
tcttactgtgagactcacctccagcctcactataatttccctgccttaaagaagcacatg
ctggtcaaagcctccacacaactacaggagaagatctgttctcaacatgacaaactgctg
gaggtttactgtcgtaccgatcagcagtgtatctgttatctatgtaccatggatgaacat
aaaggccatgatacagtctcagctgcagcagagaggactgagaaacagaagcaggtgggg
gagaaacaacagaaatcccagcagagaatccaggagagagagaaggagatgcaggagctg
agacaggctgtggactctctgaagctctctgcacaggcagccgtggacgacagcgagagg
atctttgctgagcttatccgcaccatggagacaaggtgctctgaggtgaaggagctgatc
agagaccaggagaaggctgaagtgagtcagtctgaaggcctcctggagcgactggagcag
gaggtggctgagctgaggaggagagattctgagctggagaagttctctcacacagaggac
aacatccacttcctccagaggtttaaagaccacagtgccccccctgtttctgaagagatg
cctgccgtcatccttaaccaaagtcgtgattttaagacggtgatgacctctgacctccag
gaaaagctgatgctctgctgtaaggagggagtagtggagatatcagcagcagtgaaagct
gtccacatactgcagtcagcagagccaagcacccaagcagcagcatctgtcgcacaatat
cacaggaagtattatcaaaaatactctttcaaggatatatgtgttcattgtcgcaagata
aaaatgtgtcatggccccatgggtaaatgtttatag
DBGET
integrated database retrieval system
