Oncorhynchus mykiss (rainbow trout): 110515005
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Entry
110515005 CDS
T07259
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110515005
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110515005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
Fib_alpha
zf-RING_2
zf-RING_6
zf-RING_5
Spc24
YscO-like
DUF6175
MAP65_ASE1
LMBR1
Exonuc_VII_L
DASH_Dad3
Motif
Other DBs
NCBI-GeneID:
110515005
NCBI-ProteinID:
XP_036828077
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MAQQGDLLDQDQFCCSVCLDLLKEPVTTACGHNYCRICIEGCWDQDVLKGVYSCPQCRET
FTPRPNLRKNNMLAELVEKQKKTGLQAAPPPALCYAGPGDVACDVCTGTRKQKALMSCLV
CLASYCETHLQSHYESPALKKHKLVKATAHLQEKICSHHDKLLEVYCRTDQQCICLLCVM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKNLQKAVKSLKRSAQSAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDQIHFLQRYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQCEGVSNGRASLTTERKTSLVHLCIRSAMLISTVPGMLG
AEMNSPDLVPPMELSF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagatctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcctgtggacacaattactgtagaatctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgagctggtggagaaacag
aagaagacaggactacaggctgctcctcctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaatctcactatgaatctcctgctttgaag
aagcacaagctggtcaaagccacggcacatctacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtctgctgtgtgtgatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aagaatctccaaaaagctgtgaagtctctcaagcgctctgcacagtcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcaaatccatttcctccagaggtatcagtctctctccagtatcagtgtatct
tcagacttacccagcattgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatgtgaaggtgtgtcaaatggaagggcaagtctcaccactgagaggaaaacatca
ctggtccacctctgcatcaggtcagctatgttgatcagtactgtcccagggatgctggga
gcagagatgaactcccctgacctggtaccacctatggagttgtcattttaa
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