Oncorhynchus mykiss (rainbow trout): 110515014
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Entry
110515014 CDS
T07259
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110515014
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110515014
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
110515014
NCBI-ProteinID:
XP_036795511
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All DBs
Position
12:100109206..100196374
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AA seq
375 aa
AA seq
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MEEKEEGKMVEQGNQEAPPPPDSRTQPYPSAQFAPPQNGLPAEFTASHPHPAPPDYTGQP
SVSEHPLNMYPTSQNHSEQSGQDTSIQTVSATATQTEEESQTDSQQQSQSSDSCNSKTQP
KRLHVSNIPFRFRDPDLRQMFGQFGQILDVEIIFNERGSKGFGFVTFEHSADADRARDKL
HGTVVEGRKIEVNNATARVMTNKKTVNPYANGWKLNPVVGAVYSPEFYAVPGFPYSAASA
AVAAYRGAHLRGRGRTVYNTFRAAAPPPHIPTYGGVVYQDGFYGADIYGGYAAYRYTQPA
AATAAAYGDSYGPVYAADPYNHPLAPAATYSIGAMNPFAPLADAKTRSHADDVGLVLSSL
QASIYRGGYSRFAPY
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaagaggaaggcaagatggtggagcagggtaaccaggaggcccctccccct
ccagactccaggactcagccgtacccctccgcccaattcgccccccctcagaacggcctg
cccgctgagttcaccgcctcacaccctcaccctgcgccccccgactacacaggacagccc
tccgtcagcgaacaccccctcaacatgtaccccacttcacagaaccacagtgaacagagt
ggacaggacaccagcatacagaccgtctcagccacagccacacagacagaggaggagtct
cagacagacagtcagcagcagagccagtcgtctgacagttgtaacagtaagactcaaccc
aagcgtctccatgtctccaacatacccttcagattcagggacccagacctcaggcaaatg
tttggccaatttggtcaaatcttagacgttgaaatcatttttaacgagcggggctctaag
ggttttgggttcgtaactttcgagcatagtgcggacgctgacagggcgcgagacaaatta
cacggcacggtcgtagaaggccgtaaaatagaggtcaacaatgcaacggcacgggtaatg
accaataagaagacagtcaatccttatgcaaatgggtggaagttgaacccagtagtcggt
gcagtctacagtccagagttctatgcagtaccgggcttcccctactcagcagccagtgct
gcggtggcggcctacagaggggcccatctaagaggtcgagggcgtacggtctacaacaca
ttcagagcagccgcacccccacctcacatccccacatacggaggtgttgtttaccaggat
ggattttatggtgcagatatttatgggggctatgctgcctacaggtatactcagcctgct
gccgccacagctgctgcatacggtgacagttacggaccagtatatgctgcggacccctac
aaccacccacttgctccagcagccacatacagcattggtgccatgaatccgtttgccccg
ttggctgatgccaagacgaggagtcatgcagacgacgtggggctggtgttgtcctccctg
caggctagtatatacaggggaggttacagccgcttcgccccatactaa
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