Oncorhynchus mykiss (rainbow trout): 110516932
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Entry
110516932 CDS
T07259
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110516932
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110516932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
Fib_alpha
zf-RING_2
DUF5098
zf-RING_6
zf-RING_5
DASH_Dad3
Y1_Tnp
MAP65_ASE1
DUF677
Sec8_N
ETFQO_UQ-bd
Exonuc_VII_L
zf-C2H2
TMPIT
LMBR1
Motif
Other DBs
NCBI-GeneID:
110516932
NCBI-ProteinID:
XP_036828083
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MAQQGDLLDQDQFCCSVCLDLLKEPVTTICGHSYCRSCIEGCWDQDDLKGVYSCPQCRET
FTPRPNLRKNNMLAELVEKLRKTGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLV
CLASYCETHLQPHYEFSGFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICLLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKKLKELKQAVKSFKRSAQSAVED
SDQIFTELIRSIERRRSVVKELIRAQEKAQVSQVEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSPPRRIPPQKAQYVERTWSRRNSAPRTYIVKYE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagatctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactatctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgatctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgagctggtggagaaactg
aggaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcatcttactgtgagactcacctccaacctcactatgaattttctggtttcaag
aagcacaagctggtcaaagccacggcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtctgctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaagaagctg
aaggagctcaaacaggctgtgaagtctttcaagcgctctgcacagtcagcagtggaggac
agcgatcagatctttactgagctgatccgctccattgagagaaggagatctgtggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagttgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagtcctcccaggcgtataccaccacagaaggcc
caatacgtggagaggacgtggtcgaggaggaattcggcgcccaggacatacatcgtaaaa
tatgagtga
DBGET
integrated database retrieval system
