Oncorhynchus mykiss (rainbow trout): 110518677
Help
Entry
110518677 CDS
T07259
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110518677
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110518677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Fib_alpha
Y1_Tnp
Spc24
MAP65_ASE1
YscO-like
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
110518677
NCBI-ProteinID:
XP_036828116
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAENQELFCCSICLDLLKDPVTTACGHSYCMGCIKESWDQDDLKGVYSCPQCRQTFIPRP
VLKRNIVLAEVVEKRKKTGLQAAPPPALCYAGPGDVACDVCTGTRKQKALMSCLVCLASY
CETHLQSHYESLALKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYLCTIDEHKG
HDTVSAAAERTEKQRQLGMSQKKVQQRFQEREKELKELQQAVESFKRSAQAAVEDSDQIF
TELIRSIERRSSEVKELIRAQVKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSHTEDHI
HFLQSYQSLSSISASSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKISTTVNI
VDVVLPPEPKTREQLLQYSCQLTLDPNTAHTHLSLSEGNRKVTYKEQVQPYPCHPDRFTN
QYHVLCREGLSGRCYWEVEWSGNVVTAVSYKDISRTGTDSGFGHNNKSWNLEYYRGGYWF
RHNNVVTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPGFGIGYF
PFFYGTVELVKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatcaggaactgttctgttgctccatctgtctggatctactgaaggatccg
gtgactactgcctgtggacacagttactgtatgggctgtattaaagaaagctgggatcag
gatgatctgaaaggtgtctacagctgtccacagtgcagacagacctttatcccaaggcct
gttctgaagagaaacattgtgctggctgaagtggtggagaaacggaagaagacaggactc
caggctgctccccctcctgccctgtgctatgctggacctggagatgtggcgtgtgatgtc
tgcaccgggaccagaaagcagaaagccctcatgtcctgtctggtgtgtctggcctcttac
tgtgagactcacctccaatctcactatgaatctcttgctttgaagaagcacaagctggtc
aaagccaccgcacaactacaggagaagatctgctctcatcatgacaaactgctggaggtt
tactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatagatgaacataaaggc
catgatacagtgtcagctgcagcagagaggactgagaaacagaggcagctggggatgagt
cagaagaaggtccagcagagattccaggagagagagaaggagctgaaggagcttcaacag
gctgtggagtctttcaagcgctctgcacaggcagcagtggaggacagtgatcagatcttt
actgagctgatccgctccattgagagaaggagctctgaggtgaaggagctgatcagagcc
caagtgaaggctcaagtgagtcaagctgaaggactcctggagcaactgaagcaggagata
gctgaactgaggaagagaagcactgagctggagcagctctcacacacagaggatcacatc
catttcctccagagttatcagtctctctccagtatcagtgcatcttcagacttacccagc
atcgttgtccgtcctcttcagtactttggagatgtgagtaagactgtgtctgaactgaga
gagaaactagaagacttccttaaaggagaatggaccaagatctccactacagtgaatata
gtggatgttgtactgcctccagagcccaagaccagagaacagttgttacaatattcctgt
cagctcacactggacccaaacacagcacacacacacctctctctgtctgaagggaacaga
aaggtgacctataaagaacaagtccaaccatatccttgtcatccagacagattcaccaac
cagtaccatgttctgtgtagagagggtctgtctggacgctgttactgggaggtggagtgg
agtggtaatgttgttacagcagtctcatataaagacatcagcagaacagggacagatagt
ggatttggacacaataacaagtcatggaatttagagtactatagaggtggttattggttc
agacacaataatgttgtgactaaagtatcaggccctcagtcctccagagtaggagtgtac
ctggatcacaaggcaggtactctgtccttctacagtgtctctgacacaatgaccctcctc
cacagagtccagaccacattcactcagcccctctatcctgggtttgggattggatatttt
ccatttttctatggtactgtggagctggttaaactgtaa
DBGET
integrated database retrieval system
