Oncorhynchus mykiss (rainbow trout): 110521274
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Entry
110521274 CDS
T07259
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110521274
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110521274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
U-box
zf-RING_2
DUF6175
Y1_Tnp
MAP65_ASE1
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
110521274
NCBI-ProteinID:
XP_021454403
Ensembl:
ENSOMYG00000030397
LinkDB
All DBs
Position
30:8918276..8929478
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AA seq
551 aa
AA seq
DB search
MAQRGVLLDKDQFCCSVCLDVLKEPVTISCGHNYCRSCIEGCWDREVLKGVYSCPQCRQT
FNPRPNLKKNNMLAEMVDKLKRTGLQAAPCPALCYAGPGDVACDFCTGSRKQKALMSCLV
CLASYCETHLQPHYESPAFKKHKLVKATTQLQEKICFHHDKLLEVYCRTDQQCICMLCTM
DEHKGHDTVSASAERTEKQRQLRMSQQKVQQRFQEREKELKNLQKAVKSLKISAQAAVKD
SDQIFTELIRSIERRRSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFFQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVLLPPEPKTKEPLLQYSCQLTLDPNTAGTRLSLYEGNKKVTSARQIQPYPGHP
DRFTNQWQVLCREGLSGCCYWEVKWSGNVITAVSYKDISRTKTNNIFGDNSKSWGLQCYR
GGYCFRHNNVETKISGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPGF
CLCGTAELVKL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcgaggagttctgctggacaaggaccagttctgttgttctgtctgtctggat
gtactgaaggaaccagtcaccatctcctgtggacacaattactgtagaagctgtattgag
ggctgctgggatcgggaagttctgaaaggggtttatagctgtcctcagtgcagacagacc
ttcaatccaaggcctaatctgaagaaaaataacatgttggcagagatggtggacaaactg
aagaggacaggactccaggctgctccctgtcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggtccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatcccctgctttcaag
aagcacaagctggttaaagccaccacacaactacaggagaagatctgctttcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtatgctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagcttcagcagagaggactgagaaacagagg
cagctgaggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aagaatctccaaaaagctgtgaagtctctcaagatctctgcacaggcagcagtgaaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggcgctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagattgcagagctgaggaagagaagcactgagctggagcagctctcacac
accgaggatcacatccatttcttccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttttactgcctccagagcccaagaccaaagaaccgttg
ttacaatattcctgtcagctcacactggacccaaacacagcaggaacacgcctctctctg
tatgaagggaacaaaaaggtgacctctgcacgccaaatccaaccatatcctggtcatcca
gacagattcaccaaccagtggcaggttctgtgtagagagggtctgtctggatgctgttac
tgggaggtgaagtggagtggtaatgttattacagcagtctcatataaagacatcagcaga
acaaagacaaataatatatttggagacaatagcaagtcctggggtttacagtgctataga
ggtggttattgtttcagacacaataatgttgagactaaaatatcaggccctcagtcctcc
agagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctctgac
acaatgaccctcctccacagagtccagaccacattcactcagcctctctatcctgggttt
tgtctctgtggtactgctgagctggttaaactgtag
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