Oncorhynchus mykiss (rainbow trout): 110526085
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Entry
110526085 CDS
T07259
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110526085 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110526085 (ddx31)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110526085 (ddx31)
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110526085 (ddx31)
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-60S particles
Helicases
110526085 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
110526085
NCBI-ProteinID:
XP_021462367
Ensembl:
ENSOMYG00000018227
LinkDB
All DBs
Position
6:complement(49759629..49813236)
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AA seq
763 aa
AA seq
DB search
MLDLKTTKTFFGLVRDVYRIPPVTMAEDTLMLNFSSDSAPACHSKSYQRPTSQEKWALKK
AQKRKYSGIQKELPNKQQFNGPKTKDQQPTEDMEEEDVPTHKSPVRKPAPKDAAKALSPE
TLKPAQRFKAQTKMTPKSKHVGEHKGGEDSVFIKTSSLFRNNPDIPDVHRPAVTQLKEKV
FTSDSFAELDLHPHLVATLTKVLNVTTMTSVQKKTIPVLLSGQDAVVRSQTGSGKTLAYG
IPLVQSLQAVEPKIKRGDGPLAVIVVPTRELAQQSFQIFQKLLKPFTWIVPGVLMGGEKR
KAEKARLRKGINILITTPGRLVDHIKNTLSIAFSAVRWLILDEADRILDLGFEKDLTVIL
NSLNATGPPRQNVLLSATLTDGLSRLAAISMKEPVSIQVGENSEGINDLTPDPTTVQGKS
DRFAVPERLQQHMVVVPSKLRLVCLAAFILSKCKFEKGHKIIVFVSSCEAVEFLLILFNA
VLSGPKAKQQPPLSFFRLHGNMKQEERTEVFQEFSLCKTGILLCTDVAARGLDMPQVTWI
VQYNPPTTPAEYVHRVGRTARIGAKGSSLLFLTPAEMSYVTSLANHNISLSEMKMEMILS
TLMLDDRFKVRGKYDGKKSSGAPEQEVQERATVLQTEFENVVHNDNNSVQAAKRALQSFL
RAYTAYPSNMKHIFHIKALHLGHAAKSFGLRDAPQGLVTAPAKGSNKDKGQAKGKRPLKK
FSTEERVASLTRSEYASGIDGDSAAKKKKKKKSQANGEEDRVE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatctaaaaacaacaaaaacgttttttggacttgttagagacgtgtatcgcatc
ccaccagtcaccatggcagaggatacgttgatgttgaacttctcgtctgactcagctcca
gcatgtcactcgaagagttatcagagaccaacgtctcaggagaaatgggctttgaaaaaa
gcacagaaacgaaaatactcaggaatacagaaagagttacctaataaacaacagttcaat
gggcctaagaccaaggaccaacagcccaccgaggacatggaagaagaggatgtaccaacc
cataaaagccctgtccgaaagccagcaccaaaggatgcagccaaagccttgtcccctgag
accctaaaacctgcccagagattcaaagcccagacaaaaatgactccaaaaagtaaacat
gttggggaacacaaaggaggagaggacagtgtgttcataaagacttcatccctctttaga
aataacccagatatcccagacgtccacaggcctgctgtgacccagctgaaggagaaagtc
ttcaccagtgactcatttgcggagctggaccttcacccccacctggtggcgacgctgacc
aaagtgctgaatgtgaccactatgaccagtgtccagaaaaagaccattcctgtcctcttg
tctggtcaagacgctgtcgtgcgctctcaaacaggatcgggtaaaactcttgcctacggg
ataccgcttgttcagtctttacaagcagtggaaccaaaaattaagagaggggatgggcct
cttgctgtcatcgtggtccccaccagagagctagcccagcagagctttcagatcttccag
aagctcctcaagcctttcacatggatcgtgcctggagtcctgatggggggcgagaagagg
aaggcagagaaagccaggctgcgtaaagggattaacattctgatcaccacgccgggccga
ctggtggaccacatcaagaacacgctgagcatagccttcagcgctgtccggtggctcatc
ctggacgaggctgaccggattctggacctgggctttgagaaggacctgacagtgatcctc
aattccttgaatgccactggacctcccaggcagaacgtgctcctgtctgctactcttaca
gatggcttatcccggttagctgcgatcagcatgaaggagccggtcagcatccaggtggga
gagaactctgaggggatcaacgatctaactccggaccccaccacagtccagggcaagtcg
gaccgctttgctgttcccgagaggctgcagcagcacatggtggtggttcccagcaaacta
aggctggtctgcctggcagccttcatcctgtccaagtgcaagtttgagaagggtcacaag
ataattgtgtttgtgtcgagttgtgaggcagtggagttcctgctgatccttttcaacgcc
gtgctctctgggccaaaagccaaacagcagcctccgctcagcttcttccgtctccacggc
aacatgaagcaggaggaaaggacagaagtttttcaagagttctctctctgcaagactgga
attctgctctgtacggatgttgcagcacgtggacttgacatgcctcaggtgacatggatt
gtacagtacaaccctccaaccactccagcagagtacgtgcaccgcgtcgggcgaactgcc
cgtataggagctaagggaagcagccttctctttctcacccctgctgaaatgtcctatgtc
acttctctagcaaatcacaatatcagcctgtccgagatgaagatggagatgattctgtca
acgttaatgctggacgaccgcttcaaagtcaggggaaagtatgacggcaagaagtcttcc
ggggctccggagcaggaggtgcaggaaagggcaactgtcctacagacagagtttgagaac
gttgtccataacgataacaattctgtccaagcagccaagagagccttgcagtccttccta
cgggcgtacactgcctacccatccaacatgaagcacatcttccatatcaaagccctgcac
ctgggccacgccgccaagagcttcggcctaagggacgccccacagggcctggtcaccgcc
cctgccaagggctccaacaaagacaagggacaggccaagggcaagagacctctcaagaag
tttagcactgaagagcgagtggccagtctcacgcgctccgaatatgccagcgggattgat
ggagactccgcagccaaaaagaagaagaagaagaaaagccaagccaacggagaggaggac
cgagtggaatag
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