Oncorhynchus mykiss (rainbow trout): 110526380
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Entry
110526380 CDS
T07259
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110526380 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110526380 (usp47)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110526380 (usp47)
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110526380 (usp47)
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110526380 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
110526380
NCBI-ProteinID:
XP_036836628
Ensembl:
ENSOMYG00000045510
LinkDB
All DBs
Position
6:complement(66332673..66354876)
Genome browser
AA seq
1391 aa
AA seq
DB search
MEMVPSEENQLVPKEGMFWSCRQSIFNEMKKRFSQIENASEEPRVLCIVQDTTNAKTVNE
RLTLNLPASTTLSKLFEDVAHKASYVNGTFDLAWGKTGDMGSLDPSSEMSLTESGFEPGK
RNFLQLTDKDGEQPQIASDESGTAGSSGLDDSSQERFIGPLPRDGTVGCSSDYSSPSYSY
SSILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQL
QRLFLLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQQQF
SPLTADLINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQA
FVQPETLDGANQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM
SFPEELDMGPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSADDGVDEGICLDSA
SSTERVLKPKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQEDI
RKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLDCDDFPEHIKHLVQREKES
EEQEKRQREIERNTCKIKLFCMHPVKMMAMMENKLEVHKDKTLREATEMAYKLMELDGVV
PLDCCRLVKYDEFHEYLERSYEGEDDTPMGLLLGGVKSSYMFDLLLETRRAEQVFQPYKP
GEVMVKVHVVDLKTDTIAPPVSIRAYLNQSITEFKQLIAQATELSAETMRVVLERCYNDL
RLLYVPNKTLKAEGFFRSNKVFVESSESPDHQVTFTDSLLWKLLDRHGNTIRLFVSLPVQ
SPGTNRTICQKVGGDTEECSEGSKGNRNSVEAILEESTEKLKNLSLQQQQGSSTSDSQKS
SDTSDFEHIESPSPSQEPDSSSVSAVVAVDNRELENRIRAASGGAYSDPETQFPGEERSD
SEVNNDRSTSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKANEGKKET
WDTAEEDSGTDSEYDENGKSKAESYYLYFRAEPYAQEDGSGEGGQKCVLVHVDKRITLSA
FKQNLEPFVGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYR
VKVYQLLVNDAEPCKFLVDTVFAKGMTVKQSKEELMPQLKDQCKLDLNIDKFRLRKKTWK
NPGTVFLDYHVYEEDINISSNWEVFLEVLDGPEKMKSMSQLAVLTRRWTPAQMKLEPFQE
VVLESSSVEELKEKLSEISGIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVW
PLYICDDGAVVFYRDSTEEPMEQSEDERNELMKKESSRLLKTGQRVSYSPRKEKALKIYL
DGGPVKDPGQD
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagagaaccagctcgtaccgaaagagggtatgttttggagt
tgcaggcagagtattttcaatgagatgaagaagaggttctctcagatagagaatgcgtca
gaggagcccagagtgctgtgcatagtccaggacactaccaatgctaagacggtcaacgag
aggctcaccctcaacctgccagcctccactactctctccaaactctttgaggatgtggcc
cacaaggcgagctatgtgaacggcacctttgacctggcatggggcaagaccggggacatg
gggtcgctggatcccagcagtgagatgtccctcactgagtctgggttcgagcccgggaag
aggaacttcctccagctcacagacaaggacggagaacagcctcagattgcgtcggatgag
tcggggacagcgggcagcagtggtctggatgacagctcccaggagcgcttcatcggcccg
ctgcccagagatggcacggtgggctgcagcagcgactacagcagccccagctattcctac
tcctccatcctcaacaagtctgacacaggatatgtgggtttggtgaaccaggccatgacc
tgctatttgaacagccttctacaaactctgtttatgaccccggagttcagaaatgcactg
tacaactgggaatttgaggagtcggaggaagacccggtcaccagcatcccttaccagcta
cagaggctgtttttgctgctgcagaccagtaagaagagggccatcgagaccaccgacgtg
acccgcagcttcggctgggacagcagcgaagcctggcagcagcatgatgtccaggagctg
tgtagggtcatgtttgatgccctggagcagaaatggaagcagacagagcagcagcagttt
tctccacttacggctgacctgattaaccagctataccaggggaagctgaaggactatgtg
cgctgtctggagtgtggctatgagagctggaggatcgacacctacctggacatccctctg
gtcatcagaccctttggggccagccaggcttatggcagcgtggaggaggctctgcaggcc
ttcgtccagccagagactctggacggggccaaccagtatttctgtgagcgctgcaagaaa
aaatgtgatgcccgtaaggggctgaggtttctgcactttccctacctgttgactttgcag
ctgaagcgttttgactttgactacaccactatgcaccgcatcaaactcaacgaccgcatg
tccttccctgaggagctggacatgggtcctttcatcgacgtggaggacgagaaatctcct
caaacggagagctgcactgacagcggggcagagaatgaaggcagttgccacagtgaccag
atgagcaacgacttctcggcagacgacggtgttgatgagggcatctgcctggacagcgcc
agcagtactgagagggtcctgaagccaaagagttcattgacctttgagctgttctcggtc
atggtccattcgggcagcgctgcaggtggccactactatgcctgcattaagtccttcagc
gatggccagtggtacagtttcaacgaccagcacgtcagcaagatcacccaggaagacatc
aggaaaacatatggagggtcctcggggagcagaggctattactccagtgcctttgccagc
tctacgaatgcgtatatgctgatttataggttgaaagacccctcaaggaatgcaaagtat
ctggattgtgatgacttccctgagcacataaagcatctggtccagagggagaaggagtct
gaggagcaggagaaaagacagagggagatcgagcgcaatacctgcaagatcaagctgttc
tgcatgcatccggtgaagatgatggctatgatggagaacaagctggaagtgcacaaggac
aagacgctcagagaggcaacagagatggcctacaagctcatggaactggatggggtggtc
ccgctggactgctgtcgcctggtcaagtacgatgagttccatgagtacctggagcgttcg
tacgagggcgaggacgacacccccatggggctgctgctgggcggggtcaagtcgtcctac
atgtttgacctgctgctggagacccgcagagctgaacaagtcttccagccatacaaacct
ggagaggtgatggtgaaggttcacgtggtggatctgaagacggacactatcgcccctccc
gtcagcatcagggcctatctaaaccagtcaatcactgagttcaagcagctcattgcacag
gccacagagctctcagctgaaaccatgcgtgtcgtcctggagcgctgctataatgacctt
cggcttctctacgtgcccaacaagacactgaaagcagagggtttcttcaggagcaacaag
gtttttgtggaaagctctgaatccccagatcaccaggtcaccttcactgattccctcttg
tggaaactactggatcgccatgggaacacaatccgcctgtttgtctcgctgcctgtgcaa
tcccccggcaccaaccgaactatttgccaaaaagttggtggcgacactgaggagtgctct
gaggggtcaaagggcaacaggaattccgtagaggccatcctggaggagagcacagagaag
ctgaagaacctgtccctccagcagcagcagggctccagcaccagtgacagccagaagagc
tcagacaccagcgacttcgagcacatcgagtccccctcaccctctcaggaaccagactcc
tcctccgtatctgctgttgttgcagtcgacaaccgagagctggagaaccggatccgggcg
gccagcgggggggcctactctgacccggaaacccagttccctggggaggagcgctcagac
tctgaggtgaacaacgaccgcagcacaagctcagtggacagtgacatcctgagctccagc
cacagcagtgacacgctgtgcaacgctgacagcggccccatccagctggccaacggcctg
gactcacacagcataaccagcagccgccgctccaaggccaacgagggcaagaaagagacg
tgggacacagccgaggaggacagtggcacggacagcgagtatgacgagaacgggaagagc
aaggcagaatcctattacctctacttcagagcagagccatatgcacaggaggacggctct
ggggaaggaggccagaaatgtgtactggtccacgtggataagaggataactctgtcagca
ttcaaacagaacctggagcctttcgtgggggtcacctctacccagttcaaagtgttccgc
gtctacgccaacaaccaggagtttgagagtgtacggctcaacgagaccctctcctccttc
tctgacgacaacaagataaccattcgattaggcagagcactgaagaagggcgagtatcgg
gtgaaagtgtaccagctactagtgaatgatgcagagccctgtaagttccttgtggacaca
gtgtttgctaagggcatgactgtgaaacagtccaaagaggagctaatgcctcagctgaaa
gaccaatgcaagctggacctcaacatcgacaagttccgtctcaggaagaagacgtggaag
aacccagggacagtgtttctggactaccacgtctatgaggaggacatcaacatctccagt
aactgggaggtctttctggaggttctagatggaccggagaagatgaagtccatgtcccag
ctggctgtgctcacccgccgctggacccccgcccagatgaagctggagcccttccaggaa
gtggttctggagagcagcagtgtggaggaactcaaggaaaagctcagtgaaataagtggt
attcctcttgaaaacctggagtttgccaaggggcgtggaacatttccttgtgatatctcg
gttttggagatccatcaggatctggactggaaccctaaagtgtccactctgaatgtgtgg
cctctgtacatctgtgatgatggtgctgtggtcttctacagggacagcacagaggagcct
atggaacagtcggaagatgaacgcaatgagctgatgaagaaggagagcagccggctgctg
aagactggccaacgggtcagttactcacctcgtaaggagaaggcccttaagatctacctg
gatgggggcccggtcaaggacccggggcaggactga
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integrated database retrieval system
