Oncorhynchus mykiss (rainbow trout): 110528439
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Entry
110528439 CDS
T07259
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110528439
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110528439
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110528439
03036 Chromosome and associated proteins [BR:
omy03036
]
110528439
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110528439
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
110528439
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
110528439
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
110528439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
110528439
NCBI-ProteinID:
XP_021466181
Ensembl:
ENSOMYG00000008181
LinkDB
All DBs
Position
7:complement(72411359..72430465)
Genome browser
AA seq
744 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCPSPVYGFIFLFKWIEERRSRR
KVSTLVDETSVIDDDIVNDMFFAHQLIPNSCATHALLSVLLNCSGVELGTTLSRMKTFTK
GFGPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRL
FELDGLKAYPIDHGPWGEEEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVK
YESKLEILKRNRQMVLEGLQQLIRVTQPELVQDRKKPDSSPSDDTPPTIKKEEADPQPVT
SQGAEQTPPTNTAAQSQLVASSSGKGKAMGKPAAPLGGAGTSQPVTSPIVPRLPAFLDNH
NYAKSPMQEDEDLATGVGRPRVPGAPQPPYSDDDDYEDEEEEELGTPTRFRRKGVLRSRT
GRVGGGSGVETKLALGVLAEKLKKEVQRKDSLATPLSVRTEGRTGGIVITAASQPSPTPS
NESTDTASEIGSAFNSPLRSPARSQAATRPSSPVASHLSRVLFGEDEGLLRLDARQNRAV
RELGPSVSTALLHLQEDGVIYTVPPPADTALEEKKAGAPEKVIEQGSNPAVEGDGVKEEG
KEGPSVEVKEEEIRDATEVKPSMEKVISTETVGSNKPSGEKYSPKELLALLKCVEADIAN
YEVFLKEEVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQNISVRRRQGVS
IGRLHKQRKPDRRKRSRPYKAKRQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagggtggctggagctcgagagtgacccggggctgttcacgctcttggtggag
gattttggtgtgaagggggtccaggtagaggagatatacgacctacaaagcaagtgtcca
agccctgtgtatggcttcatcttcctgttcaagtggatcgaggagcgaaggtctaggagg
aaagtctccactttggtggatgagacctctgtcattgatgatgacattgttaatgacatg
ttctttgcccaccagctgatcccaaactcctgcgccacccatgcacttctgagtgtgctc
ctgaactgtagtggggttgagttgggcactaccctcagtcgcatgaagactttcactaaa
ggcttcggcccagagagtaaaggctacgccattggaaatgccccagagctggctaaagca
cacaacagccatgccagaccggagcccaggcacctgccggagaagcagaacgggattagc
gccgtgcggaccatggaagcattccactttgtcagctacgtgcccatcaaagaccgactg
tttgagctagacggcctcaaggcgtaccccattgaccatgggccatggggagaggaggag
gagtggacggataaggcacggcgggtcattatggagaggattggcttggccacggctgga
gagccctaccatgatatccgcttcaacctgatggcagtggttccggaccgcagggtgaag
tatgagtcaaaactggagatcctgaagaggaacagacagatggtactggagggtctacag
cagctgatccgggtcacccagccagagcttgtacaggacaggaagaagccagactcctcc
ccctcagacgacacaccccctactatcaaaaaagaagaggcggaccctcaacctgttaca
tcacagggggctgagcagactcctcccacaaacacagcagcccagtcccaattggtcgcg
agctcctcaggcaaggggaaagccatggggaagccagctgccccattggggggagcgggg
acctcccagcctgtcaccagccccatcgtccctcgcctaccagccttcttggacaaccac
aactacgccaagtcccccatgcaggaggatgaggaccttgcgacaggggtgggtcgtccc
cgggtgcccggtgcgccccagcccccctactctgatgacgatgactatgaggatgaagag
gaggaagagcttggcacaccaaccaggttcaggcgtaaaggggtgctgcgttcccgtaca
ggccgtgtcgggggaggcagcggcgtagagaccaagctggcactcggcgtcctggccgag
aaactcaagaaggaagtccagaggaaggactctctggccacgcccctctccgtccgtacc
gagggccgcactgggggcatcgtgatcacagccgcctcccaaccctcgcccacacccagc
aacgagagcaccgacaccgcctcggagatcggcagcgccttcaactcaccactgcgctcc
ccggcccgctcccaggcggccacgcggccctccagccctgtggcatcccacctgtcccgg
gtgttgtttggggaggatgagggtctgctgaggctggatgccagacagaaccgggccgtc
agagagctggggccctccgtcagcaccgccctgctgcacctacaggaggacggggttata
tacactgtaccaccacctgctgatacagctcttgaagagaagaaggcaggcgctccagag
aaggtaatagagcaaggtagcaatccagcagtagagggggacggagtgaaggaggagggg
aaggagggaccatcggtggaggtgaaagaggaagagatcagagatgcaacagaggtcaaa
cccagcatggaaaaggtcatctccacagaaactgttggaagcaacaagccatctggggaa
aaatactctcctaaagagctgcttgctctgctcaagtgtgtggaggctgacatcgccaac
tatgaagtgtttctaaaggaggaggtggagaagaggaaaaaatacaagattgatgaccag
aggaggacccataattatgacgagttcatctgcaccttcatatccatgctggcacaagaa
ggcatgttggccagtctggttgagcagaatatctctgtgcgtcgtcgccagggagtgagc
atcggacgtttacacaaacagaggaaaccagaccgcaggaaacgctcgcgaccctacaag
gccaagcgccagtga
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integrated database retrieval system
