Oncorhynchus mykiss (rainbow trout): 110532229 Help Entry 110532229         CDS       T07259                                  Name (RefSeq) synaptonemal complex protein 2   KO K19529   synaptonemal complex protein 2 Organism omy  Oncorhynchus mykiss (rainbow trout) Brite KEGG Orthology (KO) [BR:omy00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:omy03036]     110532229 Chromosome and associated proteins [BR:omy03036]  Eukaryotic type   Meiosis-specific proteins    Synaptonemal complex     110532229 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SYCP2_SLD SYCP2_ARLD Cor1 DUF4812 DLP_helical Motif Other DBs NCBI-GeneID:  110532229 NCBI-ProteinID:  XP_021471616 LinkDB All DBs Position 9:complement(46719562..46781807) Genome browser AA seq 1589 aa AA seqDB search MVQWFEKARLLWIEACTQRNETLLNLAEDLFDSVMVVHETSLEGTYEVTECFLHLIGQLA ADPRIHIMIQKEAIRKLNIILDKIPAELKKEKKILSSQEASDLMNNLASRIVEGGDYDLQ IALMEALCRMTTRAQRKELADDWFSMEFVASTFSKIQDSEFETDCRRFLNLLNGMQGDGR RVFSYPCLEVFLDKHELLMPADEKLEEFWIDFNLGSQSVSFYFSLADEDAQEGQWDTACI PENEVHSYTVTEEGRRRVLKLKLTEPLCVSGVEGSHLTIHFSSSLDIMQAARSVYGNKNK SFVGKRRTSVVKTTVKIVMDDNCSQALVPESQMSPDADVERERDSVPCLLPPRPSGPLQM VTPAKRRVSESSTFITSSGGGRGTGASPFSVVMAASTPRGSRPKVKPAIELVRSCERQGQ SGLGELRTAKPYYNAAPGITLSHSRREQMDAVVALSQSKATKQDTKAGPVAEKYRRHIPV DKVVEMVQTDQAEEEELLDSSIVPDSQPTMKTESTIFSHWRKVSVSEMLLPVQRGFQKAL PKPELENVEQQERPSSAQRGSGSVPGSAVSHKQLHAQLTQRLEEVLRKRDRGTGPEERAG VQIRVPEERGRPQDRGSRERAGAQGGSGPEEQSGAQGGRGPEEQDGAQGGRGPEERGEPT GRGAKVSRQDAGRPGQTKGKPKSQKSQETEATPGKAPVKPTPAKDIQERATPNSKVKATG SNSSKDKREEVVTGTMMRLISSHYENSTSSTTIKSPVESVPRWPLPPTNRYCSNRSVLEK SWLPPSMVGRAKAPGYMKSYTNSKKPSAEQQGDDVFAFKVDTSMTTGGEGKMSSDTSAID SSATHNSWAFPSTAKKGQAVKSQVAAPRRHVKKHLFSDTDTDAMMEISWLKESSRKPKPK VIDYSRQPRLHPPAPNTTYESPDLPPSSPKPVKEKAKPKKKRQRVKERSVEQKENRGAAL VAAGTSQAARRPQRAAATNAKSYREPDSASQSETEEPPAPKKRSIGPAEKIEKVCQEAVE VKKKKATTPAKEQTNVPKESSWAARLASFNPSPPAIERMRAASERSLIVLPRSPLTPQGS LSASPASGPSSPLALELPPEHPRSSAGFQPSSFYSAPGRKSDRKAKDPSLPSLPSLPSLT PTGKTPGLRAQRPSALELSPIQPALSPAQSPLLCPPSQLLLTSTALQKSVLPSPLLQSQP SPGETDQFALHFGSPGQLGLPESFDKESLVSRVKLSQSSSRSEMSSTRVEVVNPAALTTA LEKTPYSERRHKLDQRSFHLSGPCTGRKRHNSRPSSSNSEEEGKSGTRRGRQAVKMRPRK LFKPTAKPNLHAQAQAWEEQSSSDEEEKKGNGTKDRASLATTKIYHHIQSSKSARDTVMD VSPEGDLSRVVSSHMVTSSSWEADVEAEVEGELGRSPHDMGNMCRQFSSELQRKFQNRSR RMELYTKQSLKTVQQHVSSISMRVQNYRSQKLEQVRGVLLKEINNLEEDESTLKNMEKEL TTYWRKQSVAFHSYQEKETRRLQSLKSTFQTDVCHSLEYEERIFTSQMCLMRKDMKSVQD RLFKEMQDEEIMSVRRGLQALFLPEGPRF NT seq 4770 nt NT seq  +upstreamnt  +downstreamnt atggtgcagtggtttgagaaagcaaggctgttgtggatcgaggcatgcacacagaggaat gagaccttgctgaacctagctgaagacttatttgactctgtaatggttgttcatgaaaca agtctagagggaacatatgaggtcactgaatgctttctacatctcattggccagctggct gcagacccaagaatccacataatgatccagaaagaggctattcggaaactgaacatcatt ctggataagatcccagcggagctcaaaaaggagaagaagatcttatcatctcaagaggcc tcggatctaatgaacaacctggccagtcgaattgtagagggtggagattatgacctgcag atagccttgatggaagccctgtgcaggatgaccacccgtgcccagaggaaggagctggct gacgattggttctccatggagtttgttgctagcaccttcagcaaaattcaggactctgag tttgagacggactgccgcaggtttctaaaccttttgaatgggatgcagggagatgggaga agagtgttctcctacccttgtctggaggtgtttctggataaacatgagttgctgatgccc gctgatgagaaactggaggagttctggatcgacttcaacctgggaagtcagagcgtctcc ttctacttctctctcgccgatgaggatgcacaggagggtcagtgggacacagcctgtatc cctgagaatgaagtccacagttacacggtcacagaggagggtaggaggagggtgctgaag ttaaagctgacagagccgttgtgtgtgagtggggtggagggctcccacctcaccatccac ttcagctcctccctggacatcatgcaggcagccaggagcgtctacggaaacaagaacaaa tcgtttgtgggcaagagaagaacctctgtcgtgaagaccacagtcaagattgttatggat gacaactgctcccaggctcttgttcccgagagtcagatgtcccccgacgctgacgtggag agagagagggacagtgtcccctgtctgctaccccctcgcccctctggacccttacagatg gtgactccagccaagaggagggtgtctgagtccagcacgttcatcaccagcagcggagga gggagggggacaggagccagcccctttagcgttgttatggcagcatccactcccagaggc agcaggcccaaagtgaagccggctatagagctggtcaggtcgtgtgagaggcaaggccag tcgggcctgggggagctgaggacggccaaaccctactacaatgccgcccctggcattaca ctgagccacagcaggagggagcagatggatgcggtggttgctctatcacagagcaaagct accaagcaggacaccaaagctggacctgtggcagagaaataccgcaggcacatcccagtg gacaaagtggtggagatggtccaaactgaccaggcagaggaagaggagcttcttgacagc agcattgtccctgactcccagcctaccatgaaaacagagagtactatattctcccactgg aggaaagtgtctgtatctgagatgctgctgccggtacagagaggcttccagaaggcactg cccaaaccagaacttgagaacgtagagcaacaggagcgtccgtcatcggcccagagaggt tctgggtcggtccctgggtcagcagtcagccacaagcagctccacgcccagctcacccag cgcctggaggaggtcctccgcaagagggaccggggtactgggcccgaggagcgagctgga gtccagatcagagtgcctgaggagcgaggtaggccacaggaccgagggtcccgagagcga gctggagcccagggaggaagcgggcctgaggagcaaagtggagcccagggaggacgaggg cctgaggagcaagatggagcccagggaggaagagggcctgaggagcgaggtgagcccact gggagaggtgccaaagtgtcacggcaggatgcaggaaggcctggtcagaccaaggggaaa cctaagagccagaagtctcaggaaactgaagccaccccagggaaagcccctgtcaaaccc accccagctaaagatatacaggagagggcaacacctaactccaaggttaaggccactggg tcaaactccagtaaagacaagagagaggaggtggtgacgggcaccatgatgaggttaatc tccagccactacgagaatagcacatcatccaccaccattaaatcccctgtagagtctgtc cctcgctggccccttccacccaccaacaggtactgcagcaacagatctgttttggagaag agttggttgccgccatcgatggtgggaagggcaaaagcaccgggatatatgaagtcctac actaactccaagaagccctctgcagaacaacaaggagatgacgtctttgcgttcaaagtg gatacatctatgaccactgggggggaggggaaaatgtcctcggacacctctgccattgat agcagtgctactcacaactcctgggcattccccagcactgccaagaagggccaagcagtc aagtcccaggtagcagctccgcggcgccacgtgaagaagcacctgttcagcgacacagac acagacgccatgatggagatcagctggctcaaagagtccagcaggaagcccaagcccaaa gtgatcgactacagccgtcagccccggctccaccctcctgcccccaacaccacatatgag tccccagacttaccacctagctcacccaagcctgtgaaggagaaagccaagccaaagaag aagagacagagggtgaaggagagaagtgtagagcagaaagagaaccgtggagcggcactg gtggcggcagggaccagtcaagcagccaggaggccccagagagccgccgccaccaatgcc aagagctacagggagcccgacagcgccagccaatcagagactgaagagccgccagctcct aagaagcgctccatcggaccagcggaaaagattgagaaggtttgccaagaggctgtcgag gtgaagaagaaaaaggcaaccaccccggccaaggaacagacgaatgtaccgaaagagtct tcttgggctgcccggctggcctctttcaatccttccccgcctgccatcgagaggatgaga gctgcatccgagaggtcgctgatagtcttaccccggtcgcccctcaccccgcagggctcc ctgtccgcctcccctgccagcggcccctcttcaccccttgccctggagctgccccccgaa caccctcgcagcagcgcgggcttccagccctcctccttctacagcgcccctgggaggaag agtgaccgcaaagctaaggatccctctctcccatccctcccctctctcccatcccttact cccactggcaagactcctggcctccgcgcccagagacccagtgccttagagctgagccca atccagcctgctctctccccagcccagtctcccctcctctgccctccctcccagctcctc ttgacctccacggccctccagaagtcagtgctgccctcccctcttctccaatcacagccc tctccaggagagactgatcaattcgccctccattttggctccccaggccagctgggcctg cccgagtccttcgacaaggagtcacttgtctccagagtgaagttgagccagtcctcgtcc aggtcagagatgtcatcgacccgagtggaggtggtcaacccggcagccctgacaaccgca ctggagaaaaccccatactctgagcgaaggcacaagctggatcaacgcagctttcacctg tcaggtccctgcaccgggcgcaagcgccacaactcccgcccctcgtccagtaactcggag gaggagggaaagagcggcacacgaagagggaggcaggcggtcaagatgaggcctaggaaa ctgtttaaacccacagccaagcccaacctccacgctcaggcccaggcatgggaggaacag agcagctctgacgaagaggagaagaaaggaaatggaacaaaggacagggcctcgctggca accacgaaaatatatcaccacatccagagcagcaagagcgctcgtgacacagtcatggac gtttctccggagggggacctgagccgggtggtgtcgtcccacatggtgacgtcatccagc tgggaggccgacgtggaggccgaggtggagggtgagctgggtcgctcccctcacgacatg ggcaacatgtgtcgccagttcagctccgagctccagaggaaattccagaatcgctccaga cgtatggagctgtacaccaagcagtctctgaagaccgtccagcagcacgtctcttccatc agcatgagggttcaaaactacaggtctcagaagctggaacaggtcaggggtgttctgctg aaggagatcaacaacttggaggaggacgaatccactctaaagaacatggagaaggaactg actacatactggaggaagcagtctgtggctttccattcctaccaggagaaagagactaga agactgcagagcctcaagagtaccttccagaccgatgtgtgtcacagcctggagtacgag gagaggatcttcacctctcagatgtgcctgatgaggaaagacatgaaatcagttcaggac agactcttcaaggaaatgcaagacgaggagataatgagtgtgaggagaggactacaggct cttttcctgccagagggaccaagattttaa

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