Oncorhynchus mykiss (rainbow trout): 110533100
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Entry
110533100 CDS
T07259
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110533100
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
DSCAM family
110533100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
Ig_6
Sp38
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
110533100
NCBI-ProteinID:
XP_036846079
LinkDB
All DBs
Position
10:complement(36398940..36592948)
Genome browser
AA seq
2059 aa
AA seq
DB search
MWLVTLLLLYSLQEVHSEDVGSTRLYFVKASLQRLTYSSSVGVSLPCPAGGTPTAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNDYFCTAENQAGKIRSPNIRVK
AVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWERDTVSIIPANRFFLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESSPTILDSFLAGEVRAG
LSVELPCIAAGYPSPTVRWLKDGRPLPSDAHWTRRLTGLTISDLRQEDSGSYACEVTNSF
GSKEVSGALYVIDPLRVTLSPKSLKTGISSTLFFTCAVEGSPEYTVAWYRNTDPIIPDQH
ISIQGPHNDTLQITAAQKSHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVA
PGEPFSLMCGAKGAPPPSITWTLDDEPVVRDSAYKTSQYTLSDGLTVSHVNVSSPAIRDG
GVYRCAARNSAGSAEYQARINVRGSPRIREMRDITAVAGRNTFITCRVIGYPYYSIKWFK
DGMLLPDNHRQVVYENGTLRLSDVQKGMDEGTYLCSVLIQPQTSIDQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVGIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDGIYGKAGVLNCSVEGYPP
PKVMWKHAKGIGNPQQYHPVPLTGRIQIMGNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMVLTVKIPAMITSHPNTTMAIKGQVKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDTWDHKYTTRNISPTNNQANIVELHPACVY
SIRMYSFNKIGRSQPSKELTISTEEAQPDGPPMDVILQPMTSQSIRVTWRAPRKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGG
GCCGGQAQGPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQ
TREDLPGPPAGIKAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPAPSEYETNP
EMLFYRITHLTRGKQYLIWAAAVTTAGRGNISEKVTVEPAGKAPAKILSFGGTVTTPWMK
EIRLPCSSVGEPTPTFKWTKDSEYTAIPVTVDGQRQILSNGTLVLRSVKAEDSGYYTCTA
TNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNT
EEWRDVFITSTERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPAFNKEQ
PLLTHINSTHAGLNLQGWTSGGCPITALLLDFRPKGTWAWQSLKANATAQLFLSELREAT
WYELKMKACNSAGCGNQSSQFATTDYDGSTIPPINSAQEDRDDVKKLFSIGSPVILVTLG
VALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSMDTPVKGPPQGPRLHIDIPRVQLL
IEDKEGIKQIGEDKAAAPVTDTEFSQSVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPG
TNPVSRKSVKSAHSSRNRYSSQWTLSRPGQSQSTASARTLTSDWRTMGSHGITATESDSY
SASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQ
MTTGTNDPADSMTSLSTPSETGLCRFTASPPKPQDYDRGRPTNVAVPIPHRANKSEFCNL
PLYMKTDPFFRKQAELHDPCPAVPPREASIRSLAQRAYHTQGRHMTLDPSKQQALTLGHS
GLGSLGVSSGTATLPQRTLTMPSSNPAATASTSSTSSNPTGSSTKMGGSRDSLLENSSSA
LGRLQKQGVGAYSKSYTLV
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttactcctgctgtactctctccaggaagtacacagtgaggatgtg
ggctctaccaggctgtactttgtgaaggcgtccctccagaggctgacctactccagctcg
gtgggggtgtctctgccctgtccggcgggcggcacccccaccgccatcctgcgctggtac
ctggccaccggcgatgacatctatgacgtgccccacatccgtcatgtccatgccaatggc
accctccaactctaccccttctctccctccgccttcaactcctacatccacgacaacgac
tacttctgcaccgcagagaaccaggctggcaagatccgcagccccaacatcagagtcaaa
gctgtgttcagggagccgtacacggtgcgtgtggcagaccagcggtccatgcggggcaac
gtggccgtgttcaagtgcctcattcccaccgccgtgcaggagtacgtcagcgtggtgtcc
tgggagagagacaccgtttccatcatcccagctaacaggttcttcctgacatcctttggt
gctctgtacatctcagatgtccagaaggaggatgccctctccacctaccgctgcatcacc
aagcacaaatacagtggagagacacgccagagcaatggagccaggctgtctgtcatggac
cccacagagtcgtctcccactatcctggacagtttcctagcgggggaggtgcgggcgggt
ctgagtgtggagcttccctgcattgcagcagggtaccccagccccacagtgcgctggctg
aaggacggccgcccactgccttccgatgcccactggacgcggcgcctcacaggtctgacc
attagtgacctcaggcaggaggacagcggcagctatgcctgtgaggtcaccaacagcttc
ggctccaaggaggtgtccggagcactctatgtcatagaccccctgcgagtgaccctttcc
cccaagagtctaaagacgggcatcagcagtaccctgttctttacctgtgctgtggagggt
tctccagagtacacagtggcctggtacaggaacacagaccctataatcccagatcagcac
atctctatccagggcccccacaacgacaccctgcagatcacagcggctcagaagagccac
tctggggcctaccagtgcttcgcctcccgcaagggccacactgcccaggacttctctatc
atactgctggaggatggtactcctcgtatcgtgtcgtccttcagtgagcgcgtggtcgcc
cccggggagcctttctccctgatgtgtggcgccaaaggagccccaccaccttccatcacc
tggacgctggacgacgagcctgtggtgcgagactccgcctacaagacaagccagtacacc
ctatcagacggcctgaccgtgtcacatgtcaacgtaagcagcccggccatccgcgacggg
ggagtgtatcgctgcgctgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggttctcctaggatcagggagatgcgtgacatcacggctgtagctggaagg
aacacctttataacctgtcgtgtgattggttacccatactactctatcaagtggtttaag
gacggcatgctgctgcctgacaaccatcgccaggttgtgtatgagaatggaaccctgagg
ctgagtgatgtgcagaagggcatggacgagggtacctacctgtgtagtgtgctcatacag
ccacagacctccattgaccagactgtccacgtcactgtgaaagtgccgcccctgatccag
ccctttgacatcccttccacgtcggtgggaaagctgatgtacatcgcctgcgtggtgtcg
tcaggtgacatgcctatccgcatcacctggcacaaagatgggcagcttatcgtgcctggc
tccgcctccggcgttggcatagagaccaaggagttcatgagctccctgcagatctccaag
gtgaccctgaagcacaacggcaactacacctgcattgctagcaacgccgcggcaaccgtc
agctgggagagacaactgatcgtcaccgttccccctcgcttcgtggtacagcctaacaac
caggatgggatctatgggaaggcaggagtactcaactgctctgtggagggataccctcct
cccaaagtcatgtggaaacacgccaaaggtatagggaacccccagcagtaccaccctgtg
cctctgactggtcggatccagatcatggggaacggctccctgctgatccgtcatgtcctg
gaggatgaccggggatactacctctgtcaggcctccaacggagtgggctctgacatcagc
aagagcatggttcttactgtcaagattccagccatgatcacgtcacaccccaacaccacc
atggccatcaagggccaggtgaaggagctgaactgcacagcgcggggagagcagcccatc
atcatccgctgggagaggggcgacaccgtcatcgacgccgagaggaacccccgctactcc
atcaccatcaacaagaaaggggacgaggtcatctccacgctcaagctgaagccagcggag
cgcggggactcagtcttcttctcctgccatgccatcaactcatacggagaggggcgagga
ctcatccaacttaccgtgcaagagcctcctgaccctcctgagttggaggtgagagaggtg
aaggaccgcagtatgaacctgcgctggatccagaggttcgacggcaacagcatcatcacc
agctacgacattgagtataagaacaagtctgatacttgggatcacaagtacaccaccagg
aacatctcccccactaacaaccaggctaacatcgtggagctgcaccctgcctgtgtctac
agcatccgcatgtactccttcaacaagatcggacgcagccagcctagcaaggagctcacc
atcagcactgaggaagcacaacctgatgggccccctatggatgtgatcctccagccaatg
acgtcgcagagcatacgggtcacatggagggcccccaggaaggagcttcagaacggggtg
atccggggctaccagattggttaccgtgagaacgggccgggcagtaacggccagtacagc
attgtggagatgaaggccacaggggacagcgaggtgtacactctggacaacctgaagaag
tttgcccagtatggagtggtggtccaggccttcaacagggctggtactggcccctctagc
actgagatcaacgctaccacactggaggatgtgcccagccagccaccccagaacgtgcgg
gccatctcggtgacgtcagacgaggcggtgatcacgtgggcggagcccccgcgtctgacg
ctgcatggcgtgctgaagggctaccgcgtggtgttctggtccctcttccctgacggaggt
gggtgctgtgggggccaggcacaggggcccatgcagaaatggggagagatgcagaacatc
actacaactcgtgagcaggtggagctgagagggctggagaagttcactaactacagtgtc
caggtgctggcctacacacaggctggggacggggtcaggagcaatgtcctgtacatccaa
acccgcgaggacctcccaggtcctccagctggtatcaaagccgtgccctcatctcccagc
agtgtggtcgtgtcctggctacccccccataaacccaatggtgtcatccgcaagtacacc
atctactgctccagcccaggctccggacagccggctcccagtgagtatgagaccaaccca
gagatgttgttctacaggatcacccatctgacccgcggtaaacagtacctcatctgggcc
gccgctgtgacaaccgctggccgcggcaacatcagcgaaaaggtcaccgtggagcctgct
gggaaagccccagctaagatcctgtcgttcgggggcacagtgaccactccctggatgaag
gagatccgtttgccttgcagctcagtgggagaacccacccccaccttcaaatggaccaaa
gacagtgagtacacggctattcctgtgactgtggacggacagcgtcagatcctgtccaat
ggtactctagtgctacgttccgtcaaagctgaggattctgggtactacacgtgcacggcc
accaacacgctgggctttgacaccatcattgtcaacctgctggtgcaagttcctccagac
cagccccgtctgaccgtctccaccacctctacctcttccatcaccctggcctggatacct
ggggacaacggaggcagctccatcagaggttttgtcctgcagtactcggtagacaacaca
gaggagtggagggatgtgttcattacttccactgagcgttccttcaggctggacaacctg
cgctgtggcacctggtacaaggtcaaactggcagccaagaacagtgtgggttcaggacgc
atctctgagatcatcgaggccaagacgcacggacgagagcctgcgttcaacaaggagcag
cccctgctcacccacatcaactccacccacgcggggctcaacctgcagggttggaccagc
ggaggctgccccatcaccgctctgctgctggacttccggcccaagggcacgtgggcctgg
cagagcctgaaggccaacgccacagcccagctcttcctcagcgagctgcgggaggccacc
tggtacgaactgaagatgaaggcctgcaacagtgccggctgtgggaaccagagctcccag
ttcgccaccacagactacgatggcagtaccatccctcctataaactcggcccaggaggac
agagacgatgtgaagaagctgttctccataggctctcctgtcatcctggtcaccctgggc
gtcgccctgctcttcatcatccgcaagaaacgcaaggagaagagactgaaacgactcaga
gatgctaagagccttgcagagatgcttatcagtaagaacaaccgcagcatggacacccca
gtgaaaggtcctccccagggtccccggctccacatcgacataccccgtgtccagctgctc
atcgaggacaaggaggggatcaaacagataggtgaggacaaggcagcggccccagtgacg
gacaccgagttcagccaatctgtgaatccacagagcttctgcacgggcgtgtctctgcac
caccccgccctcatccagaacacagggccattgattgacatgtcagacatccgccctgga
accaacccagtgtcgaggaagagtgtgaagtcggcccacagctccaggaaccgttactcc
agccagtggaccttgagcaggccgggccagagccaatcaacagcctccgcaagaactctg
acctctgactggcgcaccatgggctctcacggcatcaccgccaccgagagtgacagctac
agcgccagcctgtcgcaggacactgataagggtcgtaacagcatggtgtccacagagagt
gcgtcgtctacgtacgaggagctagcgcgggcctacgaacacgccaaactggaggagcac
ctgcagcatgccaagttcactatcacagaatgtttcatctccgacagctcctctgatcag
atgaccactggcaccaacgacccggccgacagcatgacatcactcagcacgccgtccgaa
acaggcctttgtcgcttcaccgcctcgccacccaaaccccaagactatgaccgcggcaga
cctaccaatgtggccgtgcccatcccccaccgcgccaacaagagtgaattctgcaacctc
ccactctacatgaagacagaccctttcttcaggaaacaggcagaactgcatgacccgtgc
cctgctgtaccgccccgggaggcctccatccgcagcctggcacagcgggcgtaccacacc
cagggccgtcacatgactctggacccgtccaagcagcaggccctgacgctgggacactct
gggctgggcagcttgggtgtgagctcaggtactgccaccctgccccagaggactctcact
atgcccagctccaaccctgcagccacagcctccacctccagcaccagcagtaatcccact
ggctccagcaccaagatggggggctccagagactcactgctagagaacagctcctcagcg
ttgggcagactgcagaagcaaggggtcggggcctactccaagtcttacacactggtgtag
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