Oncorhynchus mykiss (rainbow trout): 110533816
Help
Entry
110533816 CDS
T07259
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110533816
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
110533816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Bromodomain
NBCH_WD40
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
110533816
NCBI-ProteinID:
XP_021474019
Ensembl:
ENSOMYG00000003430
LinkDB
All DBs
Position
10:complement(37362189..37395821)
Genome browser
AA seq
1770 aa
AA seq
DB search
MAEEQCSEIEAELYYLIARFLQSGPCKKSAQILVEELEEYELIPKRWSWDGKQYKRNFQD
WVILNQHIPADYLLRVCQQIGPLIDKEAPPSVPGVQTLLGLGRQSLLRTAKSCSHTEWSG
TAVAALHRGRPPEPPVSFGKPPSIVSIMGARQATGTARFGHALPSYTYQHVKMHRRILGH
LSSVYCVAFDRSGRRIFTGSDDCLVKIWSTDDGRLLSTLRGHAAEISDMAVNYDNTLIAS
ASCDKVIRVWCLRTCAPITVLQGHAASITSIQFCPAVKGPMRYLASTGADGMVCFWQWHS
LSMKFVDRPVKFIERSRPGVQISTSSFSCGGMFLATGSTDHVIRVYYLGSETPMKLSELD
SHMDKVVVVQFCNNSYSLRFVSGSRDGTVRIWHYQQQEWKSITLDIATRLPGTAVVNGED
KTKLVPTMVAWDRGDRTVVTAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVLEAHPFDHRI
MLSAGHDGNIYMWDLSKGSKIRNFFNMIEGQGHGAVFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPTH
YQRLVPGRESCKDEHLVPQLGYMANGDGEVVEQVIGQQTAEEGHGESPLDVLIRELQNQP
DERRDQDGVPEGEGAVEGAEVVGSPPNVGLRRSGQVEGVRQMHHNAPRSQMATERDLLAW
SRRVVVNEVQQGVLRVMEETRRAKGEVECSLYNTERRRKPVLGAPKTEEQAPCKRSLRRT
QRKKMKQTRPAPAYQTRSSRDRRPVDRRRNSDSQMDSDSDGEAEEQAEASDASSDGEAQW
QSDSSSSVSSSDYSDWTADAGINLQPPKRTSRRQVRPPGGSSSSEEAEGQGEEARRKQVE
EKKKPKQTKQKKPSSSLSLAGCDAEEWLPPSWIMETIPRRSPFVPQMGDELMYFRQGHQA
YVRAVRRAKAYSINPQKQSWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLHPISGKM
TNESFSLKYHDMPDVIDFLVLQQFYDEAKEHNWQTGMRFRSIIDDAWWFGSVEDQQPLQP
EYPDSLFQCYTVKWDNSEREKMSPWDMEPIPDEAELPEDVGDGVVVTEEEVKARLYSPQE
GEWGAHTRDEDCQRVIFGIDELLTLDLAKAFASPVDLRDYPLYCTVVAYPTDLSTIRRRL
ENRFYRRISALMWEVRYIEHNARTFNEPQSPIVAAAKVVTDVLLRYIGDQSCTDILDLYH
KVKTELSSGEDEVKHEDTAEVDMDSDTPGTSTGQQRANPSPKKRGVVLDVRAWRGQCREL
LRRMMDGPDSEPFRQPVDLFTYQDYRDIIDTPMDLGTVTETLIIGNYENPMEFAKDVRLI
FSNSKAYTPNKKSQIYTMTLSLSAFFERQIISIISDYKSAVQNQRRKSRQSVSYRKRLHS
GGSSPPTSRPSSPKGKHKSRKKPTPKELQTLSKKRPRRPSQETSSVMVDEDSQPSSSSNS
GTGSHSGGPGADRVTRSQTTPVKNSEGNRPLTNGTRQSHRRRVLQEDEGEGSGGSNSSSS
SSSSSSSSSSSSSSDSESDSESEVGKFVDGGDHDYSKAPRLKTGYKVKGKMAVSGKRMLE
EEEAPERAKRARVQAEEQEEEDEDEQGEDEQEEEGEQPQPPHQEEGEEPEDEEEEPEDEE
EPEEMEESEEEEDSEQGEGGAEGGQKSSSRSKSGQVNTRNQGRRTVLYNDESDDESGTTE
DPLNLGMSRSGRLRRMTEKARVSHLMGWNH
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaacagtgttcagaaatcgaagctgaattgtattacctcattgctagattt
ctccagtcgggaccgtgtaaaaaatcggcacagatactggttgaggaactagaagagtat
gagttgatcccgaaacgatggagttgggacggcaaacaatacaaacgaaacttccaagac
tgggtgatcttgaaccagcacatccctgcagactacctgctgagagtatgccagcagata
ggtcctctcatagacaaggaggccccacctagtgtccctggggtccaaaccctcctgggt
ttgggaaggcagtctttgcttcgcacagctaaaagttgtagccacacagaatggagcgga
actgctgttgctgcgctccaccggggtcgacccccagaacccccagtcagctttgggaag
ccccccagcatcgtgtccatcatgggtgctcgccaggctactggcactgcccgcttcggc
catgctctgccatcctacacctatcagcatgtgaagatgcacaggcgcatcctgggccac
ctgtcctctgtgtactgtgtggctttcgaccgcagtggcagacggatatttacaggttct
gatgactgtctggtaaagatatggtccacagatgatggccggctgctgtccaccctgcgt
ggccatgcggccgagatctccgacatggcggtgaactatgacaacacgctaatcgcctca
gccagctgtgacaaggtcatcagagtgtggtgcctgcgcacctgcgcccccatcactgtg
ctgcagggccatgcagcctccatcacctccatacagttttgtccggcggttaaaggacca
atgcggtacctggcctccaccggagcagacggcatggtgtgtttctggcaatggcactcg
ctcagcatgaagttcgttgaccggccagtcaagttcattgagcggtcaaggcctggggtc
cagatctccacctcctccttcagctgtggtgggatgttcctggccacaggcagcacggat
catgtaatcagggtgtattaccttggctctgaaacacccatgaagctctctgagttggac
tctcacatggacaaagttgtggtggtccagttttgtaacaacagttacagcctgaggttt
gtgagtggtagtcgtgacggcacagtcaggatatggcattaccagcagcaggagtggaag
agcattactctggacatagccactagactgccagggactgctgttgtgaatggcgaggac
aagaccaagctggtgccaacaatggtggcctgggaccgtggtgaccgcacggttgtcaca
gcggtctctaactacctgctcaaagtgtggagctccaccacgggccagcttctgcatgtg
ctatctggtcatgatgatgaggtgtttgtcctggaggcccacccctttgaccaccgcatc
atgctctctgccggccacgacggcaacatctacatgtgggacctctccaagggatccaag
atccgcaacttcttcaacatgattgagggccaaggtcacggagctgtatttgactgtaag
ttctcagctgatggacaacattttgcctgcactgactcccatggccacctgctcatcttt
ggctttggctgcagcagaccctatgagaagattcctgaccaaatgttcttccacactgac
ttcaggccgctaatccgagacgccaataactttgtcctggacgagcagacccagcaggcg
ccccaccttatgccccctcccttccttgtggatgtggacggtaacccccaccccacccac
taccagcgcctggtgcccggcagggagagctgcaaggatgagcatctggtaccccagctt
ggctacatggcgaatggtgatggtgaggtggttgagcaagtgattggccagcaaacagca
gaggagggtcacggagaaagccctttggatgtcctgatcagagagttgcagaaccaaccg
gatgagaggcgggaccaagatggagtgcctgaaggagagggtgctgttgagggagcagag
gtagtgggatcgccccctaacgtgggcctgaggaggagtggtcaggtggagggggtgcgt
caaatgcaccacaacgcccctcgcagtcagatggccacagagagggacctgctggcctgg
agcaggagggtggttgtcaacgaagtccagcaaggggtcctccgggtgatggaggagacc
aggcgggccaaaggtgaggtggagtgttccctctacaacacagagaggaggaggaaacct
gtactcggtgctcctaagaccgaggagcaggctccatgcaagcgctccctgcggcgaacc
cagaggaagaagatgaagcagaccagacctgcaccagcgtaccagacccgctcatcacga
gatcgccgccctgtggataggcggaggaactctgacagccagatggactcagacagcgat
ggagaggcagaggagcaggcagaggccagcgatgcttcctctgatggggaagcacagtgg
cagagtgacagcagttccagtgtctcctccagtgactactctgattggacagctgatgcg
gggatcaacctccagccccccaagcgtaccagcagaaggcaggtgcggccgcccggtggc
tccagcagctcggaggaggcggagggccagggagaggaggccaggaggaagcaggtggag
gagaagaagaagcccaagcagaccaaacagaagaaacccagttcgtctctgtctctggct
ggctgtgacgcggaggaatggcttcccccgtcctggatcatggagaccatcccccgacgc
tcgccttttgtgccacagatgggtgatgagctgatgtacttcaggcagggccaccaggcc
tatgtcagggcggtgcgcagggccaaggcctacagcatcaaccctcagaaacagtcctgg
aacaagctcaacctcagggaccaggagtctgtgaaggtagttggtatcaagtatgaagtg
ggcccccccaccctctgttgtctaaaactggctttcctgcaccccatctcaggcaaaatg
accaatgagtcgttctccctaaagtaccatgacatgccggatgtcatcgatttcctggtg
cttcagcagttctatgacgaagctaaagagcacaactggcagacaggtatgcgcttccgg
agcatcatcgatgacgcctggtggtttggctcagtggaggaccaacagccactccagcca
gagtacccagacagcctgttccagtgctacactgtcaagtgggataatagcgagagggag
aagatgagcccttgggacatggagcccattcctgatgaagcggagttgccagaggatgtt
ggtgatggggtggtggtgacggaggaggaggtgaaggctcgcctctacagcccccaggag
ggggagtggggggctcacacacgggacgaggactgccagagggtcatctttggcatcgac
gagctgctcacactggacctggccaaggcatttgcgtcaccagtggacctgcgggactac
cccctctactgcactgtggtggcctaccccactgacctcagcaccatccgcagacggctg
gagaaccgcttctacaggaggatctcggctctgatgtgggaggtgcgctacatcgagcac
aacgcccgcactttcaacgagccccagagccccatcgtggcagcagccaaggtggtgact
gatgtgctcctccgctacatcggggaccagagctgcacagacatcttagatctgtaccac
aaggtgaagacggagctgagcagtggagaggatgaggtgaaacatgaagatactgctgag
gtggacatggactctgacactccagggacctccacaggacaacagcgggccaatcccagt
cctaagaagcgtggggtggtgttagatgtgcgtgcttggcggggccagtgtcgggaactg
ctgcggcgtatgatggacggccctgactctgagcccttcagacagcctgtggacctcttc
acctaccaagactatcgagacatcatagacactcccatggacctggggactgtaacagag
actctgatcatcgggaactacgagaaccccatggagtttgccaaagatgtccgcctaatt
ttcagcaactccaaggcctacacgcccaacaagaagtcacagatctacaccatgaccctg
agcctatcagccttctttgaaagacaaatcatctccatcatctcggattacaagtctgca
gtacagaaccagcggaggaagagtcgccagagtgtcagctacaggaagagactgcacagc
ggaggcagctcccctcccaccagccgaccctccagtcctaaagggaagcacaagtcaagg
aagaaaccaacaccaaaagaattacagaccttatccaagaagcggcctcgcaggccatct
caagagacgagcagtgtgatggtggatgaggacagccaaccctcatcatcgtctaactca
gggacaggaagccacagtgggggtccaggggctgaccgtgtcacccgcagccaaaccact
cccgtcaagaactcagagggtaacagacctctcactaacggcaccagacagagccacagg
agacgagtgctgcaggaggatgagggagagggatctggaggatccaatagctcatcttcg
tcatcgtcttcctcgtcttcctcatcatcctcctcctcatcagacagtgagtcggacagt
gagtcagaggttggaaagtttgtggacgggggagatcacgactacagcaaagctccccgc
ttaaaaacgggctacaaagtcaagggcaagatggccgtctctgggaagaggatgctggaa
gaagaggaagctccagaaagagccaagagagcacgagtccaggcagaggagcaggaagag
gaggatgaagacgaacaaggtgaagatgagcaggaggaagagggggagcagccacagcca
ccgcatcaagaggaaggggaggagcctgaggacgaagaggaggagcctgaggacgaagag
gagcctgaggaaatggaggaatcagaagaggaggaggactcagagcagggtgagggtggg
gcagagggcggtcagaaaagcagcagccgtagtaagtctggtcaggtgaacactcggaac
cagggccgcaggacagtgttgtacaatgacgagtcagatgacgagtcagggaccacagag
gacccactcaacctaggcatgtcccgctcaggacgcctacgccgcatgaccgaaaaggcc
cgggtcagccaccttatgggctggaaccactga
DBGET
integrated database retrieval system
