Oncorhynchus mykiss (rainbow trout): 110536807
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Entry
110536807 CDS
T07259
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110536807
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110536807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Vps8
Motif
Other DBs
NCBI-GeneID:
110536807
NCBI-ProteinID:
XP_021478164
Ensembl:
ENSOMYG00000002215
LinkDB
All DBs
Position
2:18606074..18621580
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AA seq
419 aa
AA seq
DB search
MLSSPTMILQPYGLPVYPQGAQCYPSLVQGGPGQEACPGSGDPTLPQVYAQPPSYPPPGQ
APPTPAGRLPPLDYSSAHPNSEYQEHHQLRVYQGPQHEGADTLAAISTDDALVPVTSDSQ
ALSMSVSSGGGAGSGSDEEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESAMEADRAREKLNGTIVEGRKVEVRNRHTIDSYLEYLSVCLSEKLY
PLSVQVNNATARIVTKKPQTPLVNGEVSTPGWKINPVMGAMYAPELYTGEFQFASFPYPV
AAPTLAYRGSPLRGRGRAVYNTIRSAAAPTAMPAYPGMSPFSVLYQDGLYGAEVYGGYPA
AYRVAQSPSAATATYSDGYGRVYAAATDPYHHSVGPTATYGVGTMASLYRGGYNRFTPY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgctctcttctcctacaatgattcttcagccttacggactgcccgtctatccccagggt
gcccaatgttaccccagcctagtacagggaggccctgggcaggaggcctgccccggcagt
ggtgaccccaccctcccacaggtctatgcccagcctccctcataccctccaccaggacaa
gctcctcccacaccggcaggcagacttcctcctctagactatagttccgcccaccccaac
tcagagtaccaggagcatcaccagctcagagtctatcagggcccgcaacacgaaggggct
gacactctggcagccattagcacggacgatgccctggttccggtgacctctgactcccaa
gctctgagcatgtcagtgtcatcagggggcggagcaggaagtggtagcgatgaggagggg
tcaggcaaggcccagcccaagcgtctccacgtttccaacatccccttccgcttcagagac
ccggacctcagacagatgtttgggcaatttggcaagatcctggatgtggagattatcttt
aatgagagagggtcaaagggttttgggttcgtgacctttgagagcgcaatggaggcagac
cgagcgagggaaaaactgaacggaacgatcgttgaggggaggaaggttgaagtgaggaat
agacatactatagatagttatcttgaatatctgtctgtctgtctgtctgagaaattgtac
cctctgtctgtgcaggtgaacaatgctacagccagaatagtcaccaagaagccccaaaca
cctcttgtgaatggtgaggtttcaacccctggatggaagatcaaccctgtcatgggagcg
atgtatgcacctgaactctacaccggtgagtttcaatttgccagtttcccctaccccgta
gctgctcccaccctggcctatcggggctcaccactgcgtgggcggggccgggctgtctac
aacacaattcgctcagctgccgcacccactgccatgcccgcctaccctggaatgtctcct
ttcagtgtgctgtaccaagatggattatatggagctgaagtctatggcggttatcctgca
gcgtacagagttgcccaatcaccatccgctgccacagcaacatacagtgatggatatggc
agagtttatgctgctgcaacggatccctaccaccattcagtgggacccacggcaacatac
ggcgtcggaacaatggccagtctgtacagaggaggatacaaccgcttcaccccttattga
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