Oncorhynchus mykiss (rainbow trout): 110537691
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Entry
110537691 CDS
T07259
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110537691
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110537691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-ANAPC11
zf-RING_6
SPX
zf-Nse
Dermcidin
Bac_RepA_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
110537691
NCBI-ProteinID:
XP_021479599
Ensembl:
ENSOMYG00000013861
LinkDB
All DBs
Position
12:complement(46017383..46023676)
Genome browser
AA seq
583 aa
AA seq
DB search
MATSMDSISCSICLDPLKDPVAIPCGHSYCMGCIKDYWDQDYQKGVYSCPQCRQTFIPRP
VLNTNTLLAELVESLKKTGLQAAPLAHCYAGPGDVECDVCTGRKLKAVKSCLECLASYCE
THLQPHYESPTFKKHKLVKASTQLQEKICSRHDKLLEMYCRTDQQIICYLCMIGDHKGHD
TVSAESERAERQRQQGEKQRIQKIEKEMQTVRRSVKSLKRSAQAAVEESEKIFTELICTF
ERRCSEVKELIKAQEKAAVSQAEGLLKQLEQEIAKLRRRDAELEQLSHTEDHIHFLQTLQ
SLCVSPGSEALLSITVNQHVSFEDVKKSVSELKNQIEVICSGEIAMISAKMTKVQIFHPV
EPCSLTSFSTPQSELLVGELASCRNDTTFQKIRPEPKTREEFLEYSCQLTLDPNTANNWL
CLSEGNRKVTWNPWSNKAQPYPDHPDRFSTYEQVLCREGLSGTCYWEVEWSAFKAYIAIS
YKGIGRIGRGDECWFGGNDQSWSLVCCSLLGCYFYHNNKRTAIHVPRSSRIVGVYLDHRA
GTLSFYSVSDTMTLLHRVQTTFNQPLYPGFWIYAGSSVKILNQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatccatggattcgatcagttgttcgatctgcctggatccactgaaggatcct
gtggctattccctgtggacacagctactgtatgggttgtattaaggattactgggatcag
gattaccagaagggtgtctacagctgcccacagtgcagacagactttcattccaaggcct
gttctcaacacaaacactttgctggctgaattggtggagagtctaaagaaaacagggctt
caagctgctcctcttgctcactgttatgctggacctggagatgtggagtgtgacgtctgc
actgggagaaaactcaaagccgtcaagtcctgtctggagtgtctggcctcttactgtgag
actcaccttcaacctcactatgaatctcctacatttaagaagcacaagctggtcaaagcc
tccacacagctacaggagaagatttgctctcgtcatgacaagctgctggaaatgtactgc
cgtaccgatcagcaaattatctgttacctctgtatgataggtgatcataaaggccacgat
acagtgtcagctgaatcagaaagggctgagagacagaggcagcagggggagaaacagaga
atccagaagatagagaaagagatgcagacagttagacgttctgtgaagtcactgaagcgg
tctgcacaggcagcagtagaggagagtgagaagatctttactgagctaatctgcaccttt
gagagaaggtgttctgaggtgaaggagctgatcaaagcccaggagaaggcagcagtgagt
caggctgaaggacttctgaagcaactggagcaggagatagccaagctgaggaggagagac
gctgagctggagcagctttcgcacacagaggatcacattcatttcctccagactttgcag
tccctctgcgtctctcctggatctgaggccttactgagcatcactgtcaaccaacatgtc
tcttttgaggatgtgaagaaatcagtgtctgagctgaaaaatcaaatagaagttatctgc
tctggggaaattgccatgatctctgcaaaaatgacaaaagtccaaatttttcaccccgtt
gagccctgtagtctcacgtcattcagcacgcctcagtctgaactgttagttggtgaacta
gcgtcatgtagaaatgataccacctttcagaagataaggcctgaacccaagaccagagaa
gagttcttggaatattcctgccagctcacattggatcccaacacagctaataactggctg
tgtctgtcagaggggaataggaaggtgacgtggaatccatggagtaataaggcccagcct
tatcctgaccatccagacagattttccacctatgaacaagtcctatgtagagagggtctg
tctggaacctgctactgggaggtagagtggagcgcattcaaggcttatatagccatctca
tataaagggattggcagaataggacgtggtgatgagtgttggtttggagggaatgatcag
tcctggagtttggtgtgttgttctctccttggctgttatttctaccacaataacaaacgg
actgccatacatgtgccccgctcttccagaatagtaggagtgtacctggaccatagggca
ggaactctgtccttctacagcgtctctgacacaatgaccctcctccacagagtccagacc
acatttaatcagcccctctatcctgggttctggatttatgctggatcatctgtaaagata
ctgaaccagtga
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