Oncorhynchus mykiss (rainbow trout): 118947092
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Entry
118947092 CDS
T07259
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
118947092
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118947092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
Fib_alpha
zf-RING_2
Prok-RING_4
Wtap
ZapD
ALIX_LYPXL_bnd
zf-RING_6
Y1_Tnp
DUF445
FapA
MAP65_ASE1
Exonuc_VII_L
LMBR1
CRA
Spc24
Motif
Other DBs
NCBI-GeneID:
118947092
NCBI-ProteinID:
XP_036828130
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MAHQGVLLDQDQFCCSVCLDLLKEPVTIPCGHSYCRSCIEGCWDQDDLKGVYSCPQCRHT
FTTRPMLMKNNMLAELVEKLRKTGLQAAPSPALCYAGSGDVACDFCTGTRKQKALMSCLA
CLASYCETHLQPHYEFPALKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYLCTM
DEHKGHDTVSAAAERTETQKQLGMSQQKVQHRFQEREKELKELQQAVESFKRSAQSAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQVEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGESTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAYTHLSLSEGNRKVTDTRKFQPYPVHP
DRFTNWYQVLCREGLSGRCYWEVERTGYVVTAVSYKDISRTERGNDGGFGNNNKSWSLKC
YRGGYWFRHNNVETKVSGPQSSRVGVYLDPKAGTLSFYSVSDTMTLLHRVQTTFTQPLYP
GFCLNGTAELVKL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactattccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgatctgaaaggggtctatagctgtcctcagtgcagacatacc
ttcactacaaggcctatgctgatgaaaaataacatgttggctgagctggtggagaaactg
agaaagacaggactccaggctgctccctctcctgctctgtgctatgctggatctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggcg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatttcctgctttgaag
aagcacaagctggtcaaagccacggcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagacacagaag
cagctggggatgagtcagcagaaggtccagcacagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacagtcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagttgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatcgaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcatacacacacctctctctg
tctgaagggaacagaaaggtgaccgatacacgcaaattccaaccatatcctgtccatcca
gacagattcaccaactggtaccaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagaggactggttatgttgttacagcagtctcatataaagacatcagcaga
acagagagaggtaatgatggtggatttggaaacaataacaagtcctggagtttaaagtgc
tatagaggtggttattggttcagacacaataatgttgagactaaagtatcaggccctcag
tcctccagagtaggagtgtacctggatcccaaggcaggtactctgtccttctacagtgtc
tctgacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcct
gggttttgtctcaatggtactgctgagctggttaaactgtag
DBGET
integrated database retrieval system
