Oncorhynchus nerka (sockeye salmon): 115102282 Help Entry 115102282         CDS       T07952                                  Name (RefSeq) plexin-A1-like isoform X1   KO K06820   plexin A Organism one  Oncorhynchus nerka (sockeye salmon) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Plexin_cytopl Plexin_RBD TIG Sema TIG_2 TIG_plexin PSI PSI_integrin Motif Other DBs NCBI-GeneID:  115102282 NCBI-ProteinID:  XP_029477932 EnsemblRapid:  ENSONEG00000015193 LinkDB All DBs Position LG20:complement(15380268..15668193) Genome browser AA seq 1888 aa AA seqDB search MICHPTPSLGGPLLPFLLLLSGLATIPSNLRTFSPPEGGLTHLVVHNKTGEVYLGAVNWI FKLSSNLTKLRNHVTGPVVDNEKCYPPPGVQSCPHELAQTSNVNKLLLLDYGQNRLIACG STSQGICQFLRLDDLFKLGEPHHRKEHYLSSVAEAGTMSGVVIGGDAAGGGGGAGKLFVG TPIDGKSEYFPTLSSRKLMANEENADMFSFVYQDEFVSSQLKIPSDTLSKFPAFDIYYIY GFSSEQFVYYLTLQLDTQLTSPDASGEQFFTSKIVRLCVDDPKFYSYVEFPIGCTKDGVE YRLVQDAYLSRPGTKLARSLGISEQDEVLFTVFAQGQKNRAKPPKESALCLFTLRRIKEK IKERIQSCYRGEGKLSLPWLLNKELACINSPLQIDDNFCGQDFNQPLGGTSTIEGLPLFV DKDDGMTSVAAYEYHGHTVAFTGTRSGRIKKILVNSINHPAMLYENGVVSEGSPIHRDLL FSPDYQHIYALTDKQVSRVPVESCEQYSSCSGCLGSGDPHCGWCVLHNVCSRKDRCERAD EPQRFASRVEQCVKLSVQPGNISVTMSKVQLVLQAQNVPNLSAGVNCSFEDYTETEGRIF GGRIYCLSPSTREVAPITRNQGDKRTVKLYLKSKETGKKFASVDFVFYNCSVHQSCLSCV NGSFPCHWCKYRHMCTQNANDCSFQEGRVNVSEECPQILPSTQIYIPVGVMKPITLLAKN LPQPQSGQRNYECIFHIQGATYSVTALRFNSTSIQCQRTSYDYEGNDLSDLPVDLSVVWN ENQVIDNPFNIQAHLYKCYALRDSCGMCLKADPRFECGWCVQEKKCSLRQECAPLDSSWM HPTAGNSRCTHPKITKLFPETGPRQGGTRLTITGENLGLQFRDILTGVRLGKVPCIPIEE EYISAERIVCLLNDATGYRVQEANVEVCVRDCLTDYRALSPRAFTFVTPFFTRVLPAQGP LSGGTRVTIEGNHLNAGSSVFVNIGRHPCHFKKRNAREIVCVTPAGLTPGSTPVMVDIDS AELRNPEVKYNYTDDPTVLRIEPDWSIASGGTLLTVSGTNLATIREPKIRAKYGSAESFH NCTVFNNSVMVCLAPSVTDSERGFSDTGSGPDEIGFYMDNVHALVVVNETFSYYPDPVFE PLSPTGVLELKPTSPLILKGRNLIPAAPGNSRLNYTVFIGETPCVLTLSETQLLCEWPNL TGQHKVTIRVGGFEYSPGTLQIYSDSLLTLPAIIGIGGGGGLLLLVIIAVLIAYKRKSRD ADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTQELDGAGIPFLDYRTYAMRVLF PGIEDHPVLKEMEVRVKEVQANQEKALTLFGQLLTKKHFLLTFIRTLEAQRSFSMRDRGN VASLIMTALQGEMEYATGVLKQLLSDLIDKNLESKNHPKLLLRRTESVAEKMLTNWFTFL LYKFLKECAGEPLFMLYCAMKQQMEKGPIDSITGEARYSLSEDKLIRQQIDYKTLTLHCM NPENENASEVTVKGLNCDTITQVKEKLLDAVYKGSPYSQRPKAGDMDLEWRQGRMARIIL QDEDVTTKIDNDWKRLNTLAHYQVTDGSVIALVPKQNSAYNISNSSTFTKSLSRYESMLR TASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHSDQREGDRGSKMVSEIYLTRLLATKG TLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHSISDSDVRHTWKSNCLPLR FWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKDIPN YKNWVERYYSDISRMPAISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYIVKYKDEILS ALQKDEQSRRQRLRSKLEQVIDTMALAS NT seq 5667 nt NT seq  +upstreamnt  +downstreamnt atgatctgccaccccaccccatccctgggaggccctctcctacccttcctcctcctgttg tcagggttagccaccattcccagcaacctcaggacattctcccctccagagggggggctc acacacctggtggtccacaacaagacaggtgaggtgtatctgggagccgtcaactggatc ttcaagctgtccagcaacctgaccaagctccgcaaccacgttacaggccctgtggtggac aatgagaagtgttatccccctccgggtgtccaatcctgcccccatgaactggcccagacc agtaacgtcaacaagctgctgctgctggactacggtcagaaccgcctgatcgcctgtggc agcacctcccaaggcatctgccagttccttcggttggacgacctgttcaagttgggtgag ccgcaccaccgtaaggagcactacctgtccagcgtggccgaggctggcaccatgtctggg gtagtcatcggtggagacgcggccgggggcgggggaggggctggcaagctgtttgtgggc acgcccatcgacggcaagtcagagtacttccccacgctctccagccgcaagctgatggcc aacgaggagaacgccgacatgttcagcttcgtctaccaggacgagtttgtctcctcgcag ctcaagatcccctcggacacgctctccaagttccccgccttcgacatatactacatctat ggcttcagcagcgagcagtttgtctactatctgaccctgcagctggatacccagctcacc tcgcccgacgccagcggggagcagttcttcacctctaagatcgtccgtctctgcgtggac gaccccaagttctactcctacgtggagttccccatcggctgcaccaaggacggggtggag tatcgtctggtgcaggacgcctacctcagccgacccgggaccaagctggcgcgatcgctg ggcatctcagagcaggacgaggtgctgttcacggtgttcgcccagggccagaagaaccgg gccaagccccccaaggagtcagccctgtgcctgttcacgctgcgccgcatcaaggagaag atcaaggagcgtatccagtcctgctacaggggagaggggaaactgtcactgccctggctc ctcaacaaggaactagcctgcatcaactcaccgcttcagatagatgataacttctgtggg caggacttcaaccagcccctgggaggaaccagcaccatcgagggtctgcctctgttcgtg gacaaggacgatggcatgacctcagtggcggcctacgaataccacggccacaccgtggcc tttaccggcacacgcagcggacgcattaagaagatcctggtgaattctatcaaccatcct gccatgctgtatgagaatggggtggtgagtgaggggagtcccatccacagagatctgctc ttcagcccagactaccagcacatctatgccctcacagacaaacaggtgagccgtgttcca gtggagagctgtgagcagtactcctcctgcagcggctgcctggggtcaggagatccccac tgtggctggtgtgtcctccacaatgtgtgctccaggaaggatcgttgtgagagggctgac gagcctcagcgttttgcctcccgagtggagcagtgcgtcaaactcagtgtccagcccgga aacatctctgtcaccatgtccaaagtgcagctggtgctgcaggcccagaatgtgcctaac ctttcggcaggggtcaactgctcctttgaggattacactgagacagagggacgcatcttt gggggacgcatctactgcctgtccccttccacacgagaggtcgcccccatcacacgcaac cagggggacaagcgtactgtgaagctgtatctgaagtctaaggagacagggaagaagttt gccagtgtggactttgtcttctacaactgcagtgtgcaccaatcgtgtctgtcatgtgtc aatggctcgttcccctgccactggtgtaaataccgccacatgtgcactcagaacgccaac gactgctccttccaggagggccgggtgaacgtgtcagaggagtgtccccagatcctgcca tccacccagatctacatccccgtgggggtgatgaagcccatcactctgctggctaagaac ctgcctcagccccagtctggacagaggaactatgagtgtatcttccacatccagggagcc acctacagcgtcaccgccctgcgcttcaacagcaccagcatccagtgtcagaggacctcg tatgactatgagggtaatgacctaagtgacctgcctgtggatctctcagtggtgtggaat gaaaaccaagtcatcgacaaccccttcaacatacaagcccacctgtataagtgctatgcg ctgagagacagctgtgggatgtgtctgaaggctgaccccaggtttgagtgtggctggtgt gtccaggagaagaagtgttctctgaggcaggagtgtgccccgctggacagcagctggatg caccccaccgctggcaacagccgttgtacacaccccaagatcactaagctgtttccggag acggggccgagacaggggggcaccaggctgaccatcacgggggagaacctgggcctacag ttcagggacatcctgacaggagtgcgtctgggcaaggtgccctgtatccccattgaggag gagtacataagcgctgagagaatcgtgtgtttgctaaatgatgccacgggctaccgggtg caggaggccaacgtggaggtgtgtgtgagggactgcctgacggactacagggccctctca ccccgggcattcacctttgtgacacctttcttcactcgagtgctgcctgctcagggtcct ctctctgggggcaccagggtcaccattgagggcaaccacctcaacgccggcagttctgtg tttgtcaacatcggacgccacccctgccacttcaaaaagaggaatgcccgggagatagtg tgtgtgaccccagcggggctgacccctggcagcacaccagtcatggtggacatcgactct gcagagctgaggaacccggaggtcaaatataactacaccgatgaccccaccgtcctgagg attgaacccgactggagcatcgctagtggtggaaccctgttgaccgtcagtggaactaac ctggccaccatcagagagcctaagatcagagccaagtacggctccgccgaatccttccat aactgcacagtgtttaataactccgtgatggtgtgcctggccccgtcagtaaccgactcc gagaggggcttctcagacacgggcagtgggccggatgagatcggcttctacatggacaac gtccacgctctggtggtggtcaacgagacgttcagctactaccctgaccccgtgttcgaa cccctcagccccaccggggtcctggagctcaaacccacctcccctctcatcctcaagggt cgtaacctaatccctgcagcgcctggtaactccaggctgaactacacggtgttcatcggg gagaccccctgtgttctgaccctgtctgagactcagctgctgtgtgaatggcccaacctc actggacagcacaaagtcacaatccgggtgggtgggttcgagtactcccctggtactctc cagatctactcagacagcctgctgaccctgcctgccatcatcggtatcggaggaggtggt ggtctgctgctattggtcatcatcgctgtgctcatcgcctacaagaggaagtcccgtgat gctgaccgcaccctgaaacgcctgcagctgcagatggacaacctggagtccagagtggcc ctggagtgtaaagaagcctttgcagagctgcagacagacatacacgagctgacccaggag ctggacggagcgggcatccccttcctggactacaggacctacgccatgcgggtcctgttc cccggcatcgaggaccaccccgtgctcaaggagatggaggtacgggtcaaggaggtccag gccaaccaggagaaggccttgaccctgtttggccagctcctcaccaagaagcacttcctg ttgacattcatccgcaccctggaggcgcagcgctccttctccatgcgtgaccgtggcaac gtggcgtcgctcatcatgacagcgctgcagggggagatggagtacgccacaggggttctc aaacagctcctatctgacctcatcgacaagaacctggagagcaagaaccaccccaagctg ctgctgcgccgaacggagtctgttgctgagaagatgctgaccaactggttcacttttctc ttgtacaagttccttaaggagtgtgctggggagccgctgttcatgctgtactgtgctatg aagcagcagatggagaaggggcctatagactccatcacaggagaggcgcgctactcactc agtgaggacaagctcatcagacagcagattgactacaagaccctgactctccactgtatg aacccggagaacgagaacgcctcggaggtgacggtgaaggggctgaactgtgacaccatc acccaggtgaaggagaagctgctggatgcagtgtacaagggcagcccctactcccagaga cccaaggctggggacatggacctggagtggcgtcagggcaggatggccagaatcatcctt caggatgaggatgtcaccaccaagattgataacgactggaaacgcctcaacacactagcc cactatcaggtgacggacggctcagtgatcgctctggtaccaaagcagaactcagcctac aacatatccaactcctctaccttcaccaagtctctcagcagatatgagagcatgttgcga acagccagcagtccagacagtctgcgctcccgcactcccatgatcacccctgacctggag agtggtaccaagctgtggcacctggtcaagaaccacgaccactctgaccagcgtgagggc gaccgcggcagcaagatggtctctgagatctatctgacccgtctgctcgccaccaagggt acgttgcagaagtttgtggacgacctgtttgagaccatcttcagcacggcccaccgcggc agcgccctgcctctcgccatcaagtacatgtttgacttcctggacgagcaggccgacaaa cactccatatcagactcagacgtacggcacacctggaagagtaactgtcttcctctgcgg ttctgggtgaacgtgatcaagaaccctcagtttgtgtttgacatccataagaacagcatc acagacgcctgcctgtctgtggtggcccagaccttcatggactcctgctccacgtcagaa cacaagctgggcaaagactcgccctccaacaagctgctctacgccaaggacatccccaac tacaagaactgggtggagaggtactactccgacatatcccgtatgccggccatcagtgac caggacatgagtgcctacctggctgaacagtcccggctgcacctcagccagttcaacagc atgagtgccctgcacgagatctactcctatatcgtcaagtacaaagatgagatcctgtct gcgctgcagaaggacgaacagtctcgtaggcaaagactgcgcagtaagctggagcaggtc atcgataccatggccttggccagctga

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