Oncorhynchus nerka (sockeye salmon): 115105240
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Entry
115105240 CDS
T07952
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04114
Oocyte meiosis
one04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
115105240
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
115105240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115105240
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115105240
Factors involved in mRNA localization
Trans-acting binding proteins
115105240
mRNA cycle factors
P-body specific factors
115105240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
115105240
NCBI-ProteinID:
XP_029482872
EnsemblRapid:
ENSONEG00000031428
LinkDB
All DBs
Position
LG22:29975000..29999552
Genome browser
AA seq
709 aa
AA seq
DB search
MGDYGFGVLVQNNTGNKSAFPVRIHPHLQPPHHHQNASQSPGAFINSTTAGNGSNNGSPW
LFSATAAHSSMQDEILGSEKPKAQQQEMQETQEKQLLSPGHPESGIVSELEKARSEENKV
EGGLSEGSNGKEKLRLESPVLTGFDYQETSGLGTPCQSSTSSSLTGFNNWSAAISQTPST
IINEDVSFFNPAASANNGPLLFQNFSHHVSPGFGGNFSPQIGPISQHHPPHPHFQHPHNQ
HQQHRRSPASPHPPPFPHRNAAFSQLPHLSNNLNKPPSPWGSYQSPSPSPSSTSWSPGGG
YGGWGGSQGREYRRGLNGGMTPLNSISPLKKTFPNNHVPSQKYSRTSPGFNPKSWMDESV
SRSENIFPFQERTRSFDGFNMHSLENSLIDIMRAEQDTLKARNYGRRRVHSSLFPMEDGF
PDDERGDQSLPGLGSPHCFPHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFV
DWPHKAESKSYFPPKGYAFLLFQDESSVQALIEACIEEDGKLYLCVSSPTIKDKPVQIRP
WNLNDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY
PKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFA
PFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacgggtttggagtcttagtgcaaaataacactggcaacaagtctgctttc
ccagttagaattcatccacatctgcaacctccacaccatcatcagaatgcatctcaaagc
cctggtgcttttataaacagtaccacagctggcaatggcagtaacaatgggtcaccttgg
ctgttttcagccacagctgcccacagcagcatgcaagatgaaattcttgggtcagaaaag
cccaaagcccagcaacaggaaatgcaagaaacgcaagaaaaacagctattatcccctggc
cacccggagtctggaatcgtatctgagttagagaaggcgaggtcagaggagaacaaggtg
gagggcggcctctctgagggtagcaatggaaaagagaagctgcgcctcgagtccccagta
ctgacaggcttcgactaccaagagacatcaggtcttgggactccgtgccagtccagtacc
tcctcgtccctgactggcttcaacaactggtcagctgctatttcccagaccccctccacc
atcatcaacgaggatgtcagcttctttaacccagctgcctctgctaacaacgggcccctc
ctgttccagaatttctcccaccacgtcagcccaggcttcgggggaaacttctctccccag
attggacccatctcccagcaccatcccccacaccctcactttcagcatccccacaaccag
caccaacagcaccgaaggtccccggccagcccccaccctcctcccttcccccataggaat
gctgcctttagccagttgccacatttgtccaataacctgaataagcccccgtcaccttgg
ggtagctaccaaagcccttctccctccccctcctccacctcctggagccccggtgggggc
tatggtggctggggaggctcccaggggcgtgagtaccgtcgaggcctcaacggaggcatg
actcccctgaactcaatctccccgctgaagaagaccttccccaacaaccacgtgccgtcg
cagaagtactctcgcaccagccctggcttcaaccccaagtcctggatggacgagagtgtg
agcaggagtgagaacatcttccccttccaggagcgcaccagatcctttgatggcttcaac
atgcactccctggagaactctctcattgacatcatgagggctgagcaagataccctgaaa
gcaaggaattatgggaggagacgagtccattcttccctgttccccatggaggatggtttc
cctgacgacgagcgtggcgaccagagcctgcctggcctaggctcaccccactgcttcccc
caccagaacggggagcgagtggagcgctactcacgcaaggtcttcgttggcggtctcccc
cctgatattgatgaagatgagataacggctagtttccgtcgctttggacacctctttgtg
gactggcctcacaaggcagagagcaaatcttactttcccccgaaaggttatgccttcctg
ctgttccaggatgagagctctgtgcaggccctgattgaggcctgtattgaagaggacggc
aagctctacctgtgtgtgtccagccccaccatcaaagacaagccggtccagatccgcccc
tggaacctgaacgacagtgactttgtgatggacggctcccagcctctggaccccaggaag
accatatttgtgggtggggtgccacgccctctccgtgcagtggagctagcaatgatcatg
gacaggctgtatggaggggtgtgctacgccggtatcgacacagaccccgagctcaagtac
cccaagggagcagggcgggtcgccttctctaatcagcagagctacattgctgctatcagc
gctcgttttgtccaactgcagcatggagaaatcgataaacgggtggaagtgaagccatac
gtcctggacgaccagctgtgtgatgagtgtcagggaacccggtgtgggggcaagtttgcc
cccttcttctgcgccaatgtcacctgtcttcagtattactgtgaatactgctgggcggcc
attcactcacgcgccggccgggagttccacaagccactggtaaaggaaggaggggaccgg
cctaggcacatctccttccgctggaactga
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integrated database retrieval system
