Oncorhynchus nerka (sockeye salmon): 115106927
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Entry
115106927 CDS
T07952
Symbol
tfec
Name
(RefSeq) transcription factor EC isoform X1
KO
K15591
transcription factor EC
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115106927 (tfec)
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
115106927 (tfec)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3371
MITF_TFEB_C_3_N
HLH
Motif
Other DBs
NCBI-GeneID:
115106927
NCBI-ProteinID:
XP_029486001
EnsemblRapid:
ENSONEG00000029510
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All DBs
Position
LG23:complement(34021177..34037724)
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AA seq
428 aa
AA seq
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MSRSCVVKVITLTEIQILPVCMEQVQSHLEGSKFHLHQAQSQQVKQYLTLGSKVAGGQGG
HPHPTGQGGQLLGTVPVMRNSHLAPLSDGSTPSSPVTLLTLASNHDSEFPMDDVIDDLIS
LESGFNDRGLDCMDPSIIMQNNVLSSSMLDIYGGEPGMTTAPHGRMTPTSRPTMLTTVKR
EVTEHETRVMAKERQKKDNHNLIERRRRYNINYRIKELGTMIPKSNDPDMRWNKGTILKA
SVEYIKWLQKEQQHARELENRQKKMEQANRRLLLRIQELEIQARAHGLPSMATALGTVEL
SSHLLKQQKQQQQPLAPQSLQGLQPPRYQEELNREYLQRTSIPAMVTGVTDQGQGVVDDP
TTFSDPLSHFTDFFSSTLKEEQRLDEILMDNPLSPFGTDPLLSAGSPDASKDSSHRSSFS
SDDGDDDL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgatcctgtgtggtcaaagtgatcactctgactgagatccagatactgccggtc
tgtatggaacaggtccagagccacctggagggctctaagttccacctacaccaggcccag
agtcagcaggtcaagcagtacctgacactgggttccaaggtggctgggggacaggggggc
caccctcaccccactgggcagggagggcagctcctgggcaccgttccagtgatgaggaac
agccacctggcccccctcagcgatggcagcacccccagcagccctgttacactgctgacc
ctggcatcgaaccatgacagtgagtttccaatggatgacgtcattgatgacttgattagc
ctggagtccgggttcaatgacaggggcttggattgtatggatcccagcatcataatgcaa
aacaacgtgctcagcagcagcatgctggacatctatgggggtgaaccaggtatgactaca
gcccctcatggccgaatgacacccacctcacgccccactatgctcactactgtaaaaagg
gaagtgacagaacatgaaacgagagtgatggccaaagaacgacagaagaaagacaaccac
aacttgattgaaagaagaagaaggtacaacatcaactacagaatcaaagaacttggaaca
atgataccaaagtcgaatgaccctgatatgcgctggaacaaaggcaccattctcaaggcg
tcggtggagtacatcaagtggctgcagaaggagcagcagcacgccagagagctggagaac
aggcagaagaagatggagcaggccaacaggaggctactgctcaggatccaggagttggag
atccaggcccgtgctcatggcctccccagcatggccactgccctgggtactgtagagctc
tcctcccacctcctcaaacaacaaaaacaacagcagcagcccttggctccccagtcactg
cagggtctccagccaccccggtaccaggaagaactgaacagggagtacctccagaggacc
tccataccagccatggtcaccggggttacagaccagggtcagggggtggttgatgacccc
accactttctccgacccgctgtctcacttcacagacttctttagctccacgctcaaagag
gagcaacggctagacgagatcctcatggacaacccgctctcgcctttcggcaccgaccca
cttctctccgccggctcgcccgacgcctccaaggactccagtcacaggagcagcttcagc
tcggacgatggcgacgatgacctatga
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