Oncorhynchus nerka (sockeye salmon): 115109404
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Entry
115109404 CDS
T07952
Name
(RefSeq) myocyte-specific enhancer factor 2A-like isoform X1
KO
K09260
MADS-box transcription enhancer factor 2A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115109404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115109404
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
115109404
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
115109404
NCBI-ProteinID:
XP_029490108
EnsemblRapid:
ENSONEG00000039692
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All DBs
Position
LG25:19525226..19641260
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AA seq
473 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVEKLRNKGHNDLCASPDPDDCFGHSPLMDDRFGKLS
EESDLMYKRCGPTALSQQNFPMHVAVPVSNQNTMSYNPGGSMSSQALAQAAASLSDSGML
SPPQASLHRSGGQQRPPTQGNAGSGFVNSRGSPGLLGTPSGNGLGKVMPTKSPPPPGVNM
GMGNRKPDLRVVIPPSSKGMMPPLSEEEEMDLNTQRLSSSQSQPLATPVVSVTTPSLPPQ
GLVYSGMPTAYNTEYSLSSAEISSLQGFGSPGLSLGSMSAWQQHQLGQTALSSLVGGGHL
PQGSNLSINTSQNINIKSEPISPPRERVTPSGFHQQQQQQRHQQQQASSRQDLGRSPVDS
LSSSCSSYDGSDREDHRPDFHTSSMGLGRPPAGTEDNRASPSVKRMRMDTWVT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggccggaagaagatacagatcacgaggatcatggatgagaggaacaggcaggttacc
ttcacgaagaggaagtttgggctaatgaagaaggcctatgagctcagcgttctatgtgac
tgtgagatagccctgatcatattcaacagctcaaacaaactctttcagtatgcgagcaca
gatatggacaaggtcctgctcaaatacactgagtacaacgagccccacgagagcagaacc
aactccgacattgtcgagaaattaagaaacaaaggccataatgacctgtgtgccagtcct
gatccagatgactgttttgggcacagccccctcatggacgaccgtttcggcaaactaagc
gaagagagtgatttaatgtacaagcgctgtggtcccacagcgctgtcccagcagaacttc
cccatgcatgtggcagtgccagtctccaaccagaataccatgtcctacaacccaggagga
tccatgagcagccaggccctggcccaggccgcagcctctctgagtgacagcgggatgctc
tccccccctcaggcctccttacacaggagcgggggtcagcagaggccccccactcaaggc
aatgcggggagtggctttgtcaactccaggggctctccgggactcctgggcacacccagc
gggaatggcctggggaaagttatgcccaccaagtctccaccgccccctggagtgaacatg
gggatgggaaaccgcaagccagacctgagagtggtgatccccccatccagcaaaggcatg
atgcccccactgtcagaggaagaggaaatggatttgaacacccaaaggctaagcagctcc
cagtcccagccactggccaccccagtagtgtctgtcaccacccccagcctgccccctcaa
ggcctggtctactcaggcatgcccaccgcttacaacaccgagtactccctgagcagtgca
gagatctcctccctacagggcttcggctctccagggctctctctgggctccatgtcggca
tggcaacaacatcaactgggccagacagctctcagttctttggtgggtggtggtcaccta
cctcagggctccaacctctctatcaacacaagccaaaatatcaatatcaagtcagaaccc
atctcccctcctcgggagcgcgtcaccccctctggcttccaccagcagcagcaacagcag
cggcatcagcagcagcaggcgtccagccggcaggacctgggccgctcgccagtggacagc
ctcagctcctcctgcagctcatacgatggcagcgaccgcgaggaccaccggccagacttc
cacacctcctccatggggctgggcagacccccggccggcaccgaggacaacagggcgagc
ccttctgtcaagcgcatgcgcatggacacctgggtgacatag
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