Oncorhynchus nerka (sockeye salmon): 115111547
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Entry
115111547 CDS
T07952
Name
(RefSeq) synapsin-1-like isoform X1
KO
K19941
synapsin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115111547
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115111547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synapsin_C
Synapsin
Synapsin_N
Motif
Other DBs
NCBI-GeneID:
115111547
NCBI-ProteinID:
XP_029493563
EnsemblRapid:
ENSONEG00000040651
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Position
LG27:complement(16017963..16048930)
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AA seq
682 aa
AA seq
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MNYLRRRLSDSNFMSNLPNGYMTDLQRPDLPQQDPAVVSPGPPERRLSTNQQSEGTGSGA
GAGFLSSFTKAVKQTTAAVAEKVTEVADKAGVASGAKILLVIDDQQTDWVKVFKGKKVHG
EFDIKVEQADFSDINLIAHATGGYSVDIEAIRNGTKVTKCFRPDFVLVRQHAFSMAKNGD
HRHIVIGLQYAGLAGVNSLHSVYNFCDKPWVFANMVRLYKQLGPEEFPLIEQVYYPNHRE
MITTPGFPVVVKMGHAHSGIGKVKVDNQYDFQDIASVVALTKTYATSEPFIDAKYDVRIQ
KIGDNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYRMWVDSCSEVFGGLDMCAVEALHG
KDGKDYIIEVVGCSMPLIGDQQGEDRAQIADLVISKMNQTVPRTASPSPVRPTAAQPVQK
VTSSQPISQPKVPQAQQRPSPQGGPQQTPTGTATLRQGSPSQQRPSPQGQPPSPGPNTQN
PPAQTSQKGTNPGAGAQQRPPGQGQKPPSGQGSPQRSMSQGGSPQNQRPQQSGPQLQQSP
PLGGMGQKSTGAQPQQRPQQKPGQPARQQSQGGGPQGPQQQRAPAQQGRPGAPTTQQPRL
SAQGQGGPGGKPPLQQKPQPPQKPNQDPPAMGAIPPLNKSQSLTNAFNIPETPTPRASLS
QDEVKAETIRNLRKSFASLFSD
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaattacctgcgtcgtcggctgtcggacagcaattttatgtccaatttgcccaatggg
tacatgactgatctacaacgccctgacctgccgcagcaagaccctgcagtagtgtcgcct
ggaccaccggagaggcgtctgtctaccaaccagcagtcggagggcactggtagcggagcc
ggagctggatttttatcttcctttactaaagctgtcaaacaaaccactgctgctgttgct
gagaaagtcaccgaggtagcagacaaagcaggcgttgcctctggtgccaagatactcctg
gtaattgatgaccaacaaacagactgggtaaaggtattcaaaggtaaaaaggttcatggt
gaattcgacattaaggtggaacaggctgacttctctgacatcaacctaatagcgcatgct
acagggggctatagtgttgatatcgaagcaatccggaatggaaccaaggtcaccaagtgt
ttcaggccagactttgtgctggttaggcagcatgccttcagtatggccaagaatggagac
caccgacacatagtgattgggttacagtatgctggtctcgcgggtgtaaactctctacac
tctgtctacaacttctgtgacaaaccatgggtgtttgctaatatggtgagattgtacaag
caacttggaccagaggaattcccactgatcgagcaggtttactatcccaaccacagagaa
atgattaccactcctggtttccctgtggtggtgaaaatgggccacgcccactcagggata
gggaaggtgaaagtggacaatcaatatgacttccaagatattgccagtgttgttgccctg
accaagacctatgccacatctgaacctttcatcgatgcaaagtatgatgttcgcatccag
aagattggggacaattacaaggcctacatgcgcacatcaatttcagggaactggaagacc
aacactggttcagctatgctggaacagatagccatgtcagacaggtatcggatgtgggtg
gactcctgctctgaggtgtttggcggtttggatatgtgcgctgtggaggctctgcatgga
aaagatggcaaggattacattatagaggtggtgggttgctccatgcctctgattggagac
cagcagggtgaagatcgtgctcaaattgcagacctggtcatctccaaaatgaaccagaca
gtccctcgcactgcaagtccctctcctgtccgtcccacagctgcacagcctgtacagaaa
gttacatcctctcagcctatctcacaacccaaagtgccacaggctcagcaacgcccttct
ccacaaggtggcccacaacagacaccaaccggcactgccacccttcgccaaggatccccc
tcccagcagcgcccctctccccaaggccagcccccttccccaggccccaacacccagaac
ccccctgcccagacatcacagaaaggaaccaacccaggagctggggcccagcagcgtccc
ccaggtcaggggcagaaacccccctctggtcagggatccccccagcgatccatgagccag
gggggctcccctcaaaaccagaggccacagcagtcaggtccccagctgcagcagagcccc
cctcttggaggcatgggccagaagtccacaggggcccagccccagcagaggccccagcag
aagccaggtcagcctgccaggcagcagtcccagggaggaggcccccagggcccccagcag
cagagagctccagcccagcaaggtcgccctggggcccccaccactcagcagccccgcctt
agtgcccagggccagggaggcccgggagggaaacctcctctgcagcagaagccccaaccc
ccacagaagcccaaccaggaccctcctgctatgggagccatccctccactgaacaaatcc
cagtctcttaccaatgccttcaacattccagaaactccaacgccacgggccagccttagc
caggatgaggtgaaggctgagaccatacgcaacctacgcaagtcttttgctagtctcttc
tcagactga
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