Oncorhynchus nerka (sockeye salmon): 115112625
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Entry
115112625 CDS
T07952
Name
(RefSeq) homeobox protein SIX3-like
KO
K19473
homeobox protein SIX3/6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115112625
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
115112625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
SMN_YG-box
Motif
Other DBs
NCBI-GeneID:
115112625
NCBI-ProteinID:
XP_029495520
EnsemblRapid:
ENSONEG00000034546
LinkDB
All DBs
Position
LG28:complement(1003197..1006734)
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AA seq
293 aa
AA seq
DB search
MVFRSPLELYPSHFFLPNFTERPVLLASSTPTRSPEDLSMFALPTLNFSPEQVASVCETL
EETGDIERLGRFLWSLPVAPGACEQINKHESILRARAVVAFHTGNFRDLYHILENHKFTK
DSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRG
LLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQGIRQNG
MRSLSESGCTPRSSAESPSTAASPTTSISSMTERVDTGTSILSVTSSDSECDV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggttttcagatcccctttagagctttatccctcccatttcttcctgccaaacttcact
gagcgccctgtgctcttggcgagcagcactcccaccaggtctccagaagacttgtcaatg
tttgcgctaccgaccctcaacttctctccggagcaagtggctagcgtctgtgagacacta
gaggaaaccggagacattgaacggctgggacgattcctatggtccctgccggtagcaccg
ggagcatgcgagcagatcaacaagcatgagtccatcctgcgagctcgcgcagtggttgct
ttccacacggggaattttcgagacctttatcacatcttggagaaccacaagtttaccaaa
gactcccatggcaaactgcaggccatgtggctggaggcacactatcaggaggccgagaag
ctgcgcggtcgccccttaggaccggttgacaagtacagggtacgtaagaagttccccctg
cccaggaccatctgggacggcgagcagaagacgcactgtttcaaagagaggacgcgcggt
ctgttaagggagtggtacctccaggacccatatccaaaccccagcaagaaaagggaactg
gcacaagccactggactcactcctacacaggtcggaaattggtttaaaaaccggaggcaa
cgagacagagccgcggcagcaaaaaacaggcttcagcaccagggaattagacagaacggt
atgcggtccctttcagaatccgggtgtactccacgcagctcggccgaatcgccgtcgacc
gcggccagtcctactaccagcatctccagtatgacagagcgagttgacactggaacgtcc
attctttcagtaacatccagtgactccgagtgcgacgtatga
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