Oncorhynchus nerka (sockeye salmon): 115112644
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Entry
115112644 CDS
T07952
Name
(RefSeq) josephin-1-like isoform X1
KO
K15235
josephin [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115112644
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115112644
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115112644
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C86
115112644
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
115112644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Josephin
TcdA_TcdB_pore
Motif
Other DBs
NCBI-GeneID:
115112644
NCBI-ProteinID:
XP_029495529
EnsemblRapid:
ENSONEG00000008898
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All DBs
Position
LG28:complement(6347634..6355025)
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AA seq
238 aa
AA seq
DB search
MGSAPCSGKGRARGGLQDLGCMPWKLSKQKGVVVRGGVGWERSDLGEHALSTPPATPPPP
IYHEKQRRELCALHALNNVFQDGAAFSRDTLQDIYQRLSPGTLVTPHKKSMLGNGNYDVN
VIMAALQIRGYEAVWWDKRRDVGSIALSNVMGFILNVPSNLRWGPLRLPLKRQHWIGVRE
VGGVYYNLDSKLRSPHTIGNPDELRKFLRYQLRGKNGELLLVVSEEVEVHQTWRSDGC
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgctccatgttctgggaaggggagggcaagaggggggctgcaggacctgggc
tgtatgccatggaagctgagcaagcagaaaggggtggtggtgcggggaggggtggggtgg
gagaggtcagacctgggagagcatgctctctccacccctccggccacgcctccaccgccc
atctaccacgagaagcagcggcgtgagctgtgtgctctgcacgcgctcaataacgtcttc
caggatggggcagctttcagcagggatactctccaggacatctaccagagactctctccc
ggcactctggtaaccccccacaagaagagcatgcttggaaatgggaactatgacgtgaat
gtcattatggccgctctgcagatccgaggatacgaggctgtctggtgggataaaagaagg
gatgtgggcagtattgcgctatccaacgtaatgggcttcatcttgaacgtcccgtccaat
ctgcgctggggtccgctgcgcctgccactcaaacgccagcactggataggggtgcgggag
gtgggtggagtctattacaacctcgactccaaactacgtagcccacataccatcggaaac
cctgatgagctcaggaagttcctgcgttaccagctgagagggaaaaatggtgagctccta
ttggtggtgtctgaggaggtggaggtccaccaaacatggaggtcagatggctgttga
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integrated database retrieval system