Oncorhynchus nerka (sockeye salmon): 115129545
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Entry
115129545 CDS
T07952
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115129545 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115129545 (pitx2)
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115129545 (pitx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
AATF-Che1
XRCC4
DUF4524
Motif
Other DBs
NCBI-GeneID:
115129545
NCBI-ProteinID:
XP_029515855
EnsemblRapid:
ENSONEG00000021329
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All DBs
Position
LG5:17875736..17886505
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AA seq
318 aa
AA seq
DB search
MNSMKDPLNLDHHHHHQTGTKLSSTQHKALAMASSLQPLQRSVDSKHRLEVHTVSDTSSP
ESVEKDSKGQSKNDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA
VWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNNW
AAKGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMTSSMVPSAVTGVPGSSL
NSLNNLNNLSNPSLNSGVPTPTCPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYTSV
QNPASNLSACQYAVDRPV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatgaaggatccattgaatttagaccatcaccaccaccaccaaaccgggact
aaactctcttccacgcaacacaaggcactagcaatggcctctagtctgcagccgttgcag
cggtctgtggactccaaacaccggttagaggtacacacggtatcggacacctccagtcca
gagtccgtagagaaagactcaaagggtcagagcaaaaatgacgactcttcagacgaccct
tctaaaaagaagcgacagcgccgacagaggactcactttaccagccagcagcttcaggaa
ctggaggccacgttccagcggaatcgctatccggacatgtctacaagagaggagatagcc
gtgtggaccaacctcaccgaggcccgtgtccgggtttggttcaagaaccggcgagcaaaa
tggaggaaaagggaaaggaatcaacaagctgagctatgcaagaacggcttcggtcctcag
ttcaatggacttatgcagccctacgatgatatgtaccccagctacacgtataacaactgg
gccgccaaagggctaacgtcggcttccctgtcgaccaaaagcttcccttttttcaattcc
atgaatgtcaatcctttgtcatcgcagacgatgttctccccgccgaactccatttcttca
atgagcatgacctctagcatggtgccctccgcggtcactggcgtgcccggttcaagcctt
aacagcctcaataacttgaacaacctcagcaacccctctcttaattcgggagttcccacg
ccaacctgcccgtacgccccgccgactcccccttatgtgtacagggacacttgcaactcc
agtctggctagcctgagactgaaagccaagcagcactcgagttttggatacaccagtgtt
cagaatccggcctcaaatctgagcgcttgccagtatgcggtggatagaccagtctaa
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