Oncorhynchus nerka (sockeye salmon): 115131383
Help
Entry
115131383 CDS
T07952
Name
(RefSeq) zinc finger protein 40-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115131383
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115131383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
NOA36
Motif
Other DBs
NCBI-GeneID:
115131383
NCBI-ProteinID:
XP_029518931
EnsemblRapid:
ENSONEG00000019249
LinkDB
All DBs
Position
LG7:7114058..7201584
Genome browser
AA seq
2688 aa
AA seq
DB search
MPRTKQNNPKNLKDKIEEAQNELKDTKAGAQKGINEGGRRSADNIKALKRKKVVAENQLK
KIPKSPVKKSLQSKTSVATLQAASSKEAAPSCSYPNSPSQNPASSPSQNRDTEYVQPNAE
SSEGVTSSIDNDRLKQRDTSFSKPQSLDPISGKEESVSGVGESQQLKDSKSGETSCEGDS
PYHASAPLEVLLKAMESDFSSLSEKQKSFPVTAVEKPGRTLSAQSNSEVNAMPAIHFGLQ
TQPAHMQNDFVNKQETYTMHSSTQAVPLQTLQHATQHFSNCGEKPGLQMSFSTGSSDTLT
HSPVSSGSNSLPRSQPPVVHTCQSLSASVPSTIQVPVTPGYNPAHMATVVNFGLEQMCSI
SAKDQKPKKQGKYVCEYCSRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHK
KSHAHAIKLGLVARSDSGSGSLSVESDKALGTHSDVEESGDSDEESSTADLDPDSSQSSV
AAFSESSLLSAGTTQGNHGDAGDPSAVFPLSQRGYESKGTASLPKVVVYPVNVSPQRADC
PRVTDSSPEQATAQRQKDFQTAHLRSSITVLSSLKEVDCTSPLQDAGSEDEDQQCRTPPG
GGHGQLQRQQATDFSQQQQGKCLLSPRSLGSTDSGYFSRSESADQAMSPPSPFVKITPPT
DMDVTKNVLPNLPAVVATASVEKPRVVQGQMHPPLETKALSLEERISKLISDNEAVVDDK
QLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPMARRSSSSSDIPKSPFTPTEKSKP
VFLLSVPNQYTPMDCLPITRSNSMPTTPGHSGLPPNIVQQPHPLRICQSFDDKMSSLNDD
VFSSAPSTPNPAIHSRTLVRQVAVEDFSTSEGLTSVRSMDEGYHGSSISTELMQRSRSFE
HAQDRNRKPLQSKGTMYECETCRNRYRKLENFENHKKFYCSELHGPKNKPVSVRETEQDV
FQHVMQQPLVPRTVISGIMDQQQSFRKRRKMKSVGDDDDQSPTDTNPPCSVSFDSCQLST
ASSGRPFSQHSIMVDLQPKSNPPQITQNQLVARGTEASESRLSPIRETQVNTSGKERGDL
QRQGSGTSVIRHTNSLSKPNSFETSESIDRTSPVDFIYKDGHRTGKTKTDATANLSLESY
HEKMSIPKCADQGKQGMENRVDSTLAAVAESCAAVQQSRLVRQNNIPEILVTEEPDREHD
GQSTEQGEKVADTFNWPQRSESLSKLPTEKLPPKKKRIRLAQMEHSSGESSFESSLSRSL
SRDSSLSRCSSISASFDRDEPSRSESPSRGEFVNKISEHQGLPIAFNTLGVPGMIRRAAS
EQISCTQPSVEILCDYRSKSFDFGSVSPSRSLPPNRSMSPMELPTSAQAFPSVQVPLIER
RRGPLVRQMSLKIGPESQQHVGRHAIPLQRLPTVFSTSQQRPQQTTNKPPLAQPFIVHSG
ETLPQKNERMVQSINLGSQGQLPQIHGLPHPWHLTSRVQTCQNIQQSVVHVVVGQEDAQN
NSADSQDKSFVPKYQLQCPALRPSQTYSLSTTQGTQTTLPVLTIPIANQMQSILKSSDVL
HNVCVAQPCFQIVSNKTQSIVLPVSLQNDPPSQNLPGALQLPQILITHEQMHPSLSVTSN
LYVVDTDTKTVPEMNKDRPPASTSLQVKHGLVSNTQNHIGEIQRAPSLGSLHCTQKMAAV
TLCPQQEPIASSKRMLSPANSLDIAMEKHQKRAKDEHGAACLTDGRSVNYLNSKMAEVTR
QRKLMLVRQVCTTEPVDSPIETEAPPLQHEKPVGEKDAQTPKNCKTMTPESTGKDEPSSV
VPQEQPRSALNTAPGSHVSSSVPANASLKPQDKSEEERWSPAKSPIRPSTFHGQVKLASS
VSVVNTRDSHRLSFPSLKTATTFTWCYLMKRRPLHVPQTDQKVSAYSTWAVSPNNPNPLG
LPTKVVMSLFDSKQNSKKIHYTEAVTTSMKSDILAYSSKLKDVMPKVLKPQKTENNSKVQ
PESQVSSESDKDSSSSKIEPRRVKIFDGGFKSNEDYVYVRGRGRGKYICEECGIRCKKPS
MLRKHIRTHSDVRPYHCTHCNFSFKTKGNLTKHMKSKAHSKKCMEMGVSAGLEDHDTEDS
GDRSQVGSTDRPDSDGEDSEGADDDNDDDNEEEEEDSQAESGLSTNPSVSASPQHIPSSL
QAELPPSSLLAQMSIHHHHPAPLSLPQLPASDSHTHHTHNASDTESVPMLSPVSLVKQMS
ISGGCSSPGPLPYSPPPHTSDTESVHMMSPVSPCRQMSIDYPDVDVPPSPPVPGKGCSKL
GQDGSLAPPTLPTSEPGVPFGTDVSTQTASFTPQTSSYSPWHFPSQGPTQGSGATQGGHT
HLFSHLPLHSQQPSCSSYSMVPVGGIQLVPAGLPAYSTFVPIQAGTVQLTIPAVSVIHRN
TSPLPFPKSSNSPQPEGSALTPTNQPLVVQEPISSIMPCFPLGQVTGLQALGASQQTLQS
MGLETLNVMGLTSSGGLTSTQLLSQHGLTLNATLGLQALTASPSSQSSTGPHHHHTHHTP
IPGLQILNIALPALIPSLSPLSALSPLPGPSERQGSPEAQGATRLSSQTELGPLVSCPSA
APSLPTATMRGSPAQEMTSSGSRPSSSGHRSSGGSDHMQTPGKEGRVTTSLPQPSPAPAA
DGVVERAGGASEPVMPRRQSMLSRQQVTEDFIDDSASSDDEDRLVIAT
NT seq
8067 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaccaagcagaacaacccgaagaaccttaaagataaaatcgaagaagcacag
aatgaactgaaagataccaaagccggcgcacagaaagggatcaatgagggtggtcgaaga
agtgcagataacataaaggcactgaagaggaaaaaggttgtggcagaaaaccagctgaag
aaaatacccaaatctcccgtaaagaagtccttgcagtccaagacctccgtggcaacactc
caagctgcctcgtccaaggaagccgcaccgtcttgctcctaccccaacagcccttctcaa
aaccctgccagctcaccaagccagaaccgagatacggagtatgtccagcctaatgctgaa
tcctctgagggagtgacatcctccattgacaatgataggctaaagcagagggatacgtcc
ttctcaaagccacagtctctcgatcccatcagtggtaaagaggaatcagtctctggtgtt
ggggagtctcagcagctcaaggacagtaagagtggcgaaacaagctgtgaaggtgactct
ccttaccatgctagcgctccccttgaagtcttgctcaaggctatggaatcagacttcagc
tccttgtcagaaaaacaaaaatcctttccagtcacagccgttgaaaaacctggccgaact
ctttctgctcagtctaatagtgaagtaaatgctatgccagctatacattttggactccaa
actcagcctgcgcatatgcagaatgactttgtaaataaacaagagacctacacaatgcac
tcctctacccaggctgttcccttgcagactttgcagcatgctacacagcatttcagcaac
tgtggggaaaagcctggcttgcagatgagcttcagtactggctcctccgataccctaact
cattcacctgtttcctcaggctccaattccttgcctcggagccagccgccggtggtgcac
acatgccagtccctatcggctagtgtccctagcaccattcaagtccctgttacacctggt
tacaacccagcccatatggccacggttgtgaattttgggcttgaacagatgtgtagcatc
tcagcaaaggaccagaagcctaagaagcaggggaagtatgtgtgtgaatactgcagtcgg
gcatgtgcaaagcccagtgtgttactcaagcacatcaggtctcacacaggagagcggccc
tacccatgtgttacttgtggcttctcattcaaaactaagagcaatttgtacaagcataag
aaatcccacgctcacgcaataaaactggggcttgtggcgcgttccgactctggaagtggg
tccctctccgtggagtctgacaaagcacttggaacacattcagatgtggaggaaagtggg
gacagcgatgaggaaagtagcacagcagacctagaccctgactcatcacaaagcagtgtt
gcagcgttctctgagagcagtttgctgagtgcaggcacaacacaaggcaatcatggggat
gcaggggatccatcagctgttttccctctgagtcagaggggctatgagtccaaagggaca
gctagcctaccaaaagtggtcgtctatcctgtcaatgtctcccctcagcgggcggactgt
ccaagagtcacagactccagccctgagcaggctactgcccagcggcaaaaggacttccaa
acggcacatctgagatccagcatcaccgtcctgtcgtccttgaaagaggtggattgcaca
agccccttacaggatgcaggaagtgaagatgaggatcagcagtgcaggactccaccagga
ggcggacatggtcagcttcagaggcagcaagccacagacttttctcagcagcagcagggc
aagtgtctgcttagtccccggagtttaggcagcacagactctggttacttctcacgttct
gaaagtgcagaccaggccatgagtcccccgagtccctttgtcaaaataaccccaccaaca
gacatggatgtcaccaaaaatgtacttcctaatctccctgcagtggttgccactgcttct
gtggagaagccacgtgttgtgcaaggacaaatgcatcctccgttagaaacaaaagcactc
tctctcgaggaacgaatctcaaagttaatatcggacaatgaggcagtggttgacgacaaa
caactggacagtgtcaaaccaagaaggacttctctttctaggagaggtagcatagactcc
cccaagtcgtatatatttaaagactcttttcaatttgaccttaaaccaatggcgagaagg
tcgagttccagctcagacatacccaagtcccccttcacccccacagaaaaatctaagcca
gtatttcttctatctgtacccaatcagtatacaccaatggactgtttaccaataacaaga
agtaattctatgcccacaactccagggcactcgggtctcccaccaaacattgtccagcaa
ccccacccactacggatctgtcagtcttttgatgacaaaatgagttccttaaacgatgat
gtgttttcatctgccccctctaccccaaatccagcaatacattctcgtactcttgtacga
caagtagcagtggaggatttctccacaagtgagggccttacctcagtccgttccatggac
gaaggttaccatgggtctagcatctccactgagttaatgcaaagaagcaggtcttttgag
catgcacaagaccgaaaccgaaagcctctgcagagcaaaggcacaatgtatgaatgtgag
acctgtcgcaataggtaccgaaaactagaaaactttgaaaatcacaagaaattctattgt
tcagagctccatggtccgaaaaacaagccagtatctgtcagagagactgagcaggatgtt
tttcaacatgtcatgcagcagccgttagtccccagaacagttatttcaggtataatggac
caacagcaatcatttagaaaaagaaggaaaatgaagagtgttggtgatgatgatgaccaa
tcaccaactgacaccaatcccccatgctctgtcagttttgattcttgccaactatcaaca
gccagttcaggtcggccattttctcagcactctatcatggttgatctacagcctaaaagc
aacccaccgcaaataactcaaaatcagctagtagcaagaggtacagaggcatcagaatcg
agactgtcaccgatcagagaaacccaggttaacacctctggtaaagagagaggcgaccta
cagaggcaaggcagcggtacatcagttatcagacacaccaactctttaagcaagcccaat
tcctttgagacctctgaatctattgacaggacctctcctgttgatttcatttacaaagat
ggccatagaacaggaaaaactaagactgatgctactgccaatctttcattagagagctac
catgaaaagatgtccattcctaaatgtgccgaccaggggaaacaagggatggaaaaccgt
gtcgacagcactttagcagcagtggctgagagctgtgctgctgtccagcagtctcgtctg
gttcgccaaaataacattcctgaaatcctggtcacagaggaacccgatcgggagcatgac
ggtcagagcactgagcaaggggaaaaggttgcagatacattcaactggccccagaggagc
gagagcctgtccaagctaccgacagaaaagcttccacccaagaaaaagagaattcgtctg
gctcagatggaacactcctctggagaatcaagcttcgagtcctcactgtctcgtagcctc
agcagagacagtagcctctcaagatgctccagtatctcagcctccttcgaccgggatgag
ccatccaggtcagaaagcccctccagaggagaatttgtgaacaaaatatctgagcatcaa
gggctaccaatagccttcaacaccctgggggtccctggcatgataagacgtgctgcctca
gaacagatcagttgcactcaaccctcagtggagatcttgtgcgactatcgcagcaagtcc
tttgactttggcagtgtctcccccagcaggtctctgccacccaacaggtcaatgtcacca
atggaactgccaacgagtgctcaagccttcccgtctgtacaggtacctctcattgaaagg
cgaagggggcccttggtacgccagatgtctttaaagattgggccagagagtcagcaacat
gtcgggaggcatgccatacctctccagaggctccccactgtattctctacatctcagcag
aggcctcaacagacaaccaacaagcctccccttgcccaaccctttattgtgcattctgga
gaaactctccctcagaagaatgaaagaatggtgcaaagcattaacttgggcagccaaggt
caactgcctcaaattcatggccttccacacccttggcacctaacgtcgagggttcagaca
tgccaaaatatacagcaatctgtggttcatgtcgtggtcggccaagaagatgcccagaac
aactctgctgactctcaagacaaaagctttgtgcccaaataccaactgcagtgtcctgct
ctgagaccaagccaaacatactctctctctaccacacaaggtactcagacaactttgcca
gtcttaacaatacctattgccaatcagatgcaaagtattttgaagtcttcagatgttctc
cacaacgtctgtgtggcacaaccgtgttttcagattgtaagcaataagacacaatcaata
gtcttgcctgtaagcctacaaaatgacccaccttctcaaaacctaccaggtgctctccaa
ttgccacagatactgataactcatgagcagatgcacccttccctctctgtgaccagtaac
ctgtatgttgtagatactgacacaaagactgtaccagaaatgaacaaggacaggcctcca
gcatctactagccttcaagtaaaacacggtttagtttccaatacccagaaccatattggt
gaaattcaaagagctccctccctggggtccttacactgcacccagaaaatggcagctgtg
accctttgcccacaacaagagcccattgcctcaagcaagagaatgctctcccctgccaac
agcttggatatcgccatggaaaaacatcagaagcgagcaaaggatgaacatggtgctgca
tgcctcactgatggcaggtcagtcaactacctgaactccaagatggcggaggtaactagg
caacggaagctgatgctagtcaggcaggtgtgtaccactgaaccagtggacagtcccatt
gaaactgaggcccctccactgcaacacgagaagccagtaggtgaaaaggacgcccagact
cctaagaactgcaagactatgacacctgaaagcaccggtaaggatgaaccatcttctgta
gttccccaggaacaaccacgctctgcattaaacaccgctccagggagtcatgtctcctcc
tctgtgccagctaacgcctccctgaagcctcaagacaaaagcgaggaagagagatggtct
cccgccaagtctcccattaggccctcgactttccatggacaggtgaaattggcctcatct
gtatctgtcgtcaacacacgagacagccatcgcctgtctttccccagcctgaaaactgcc
accacctttacttggtgttacctgatgaagaggaggcctctgcatgttccccagacggac
cagaaggtctcggcctactccacctgggcggtgagccccaacaaccccaacccactgggc
ctgcccaccaaagtggtgatgtctctctttgactccaagcagaactcgaaaaaaatacac
tacacagaggccgtaacgacaagtatgaaatccgacatcttggcctattcaagcaagcta
aaagacgttatgccgaaggtcctaaagcctcagaaaactgagaataacagcaaagtgcaa
cctgagagtcaggtgagcagcgagtcagacaaggattcttcctcatccaaaatagagcca
cggagggtcaaaatatttgatggaggattcaaatctaacgaggactatgtctatgtgcgt
gggcgtggtcgtggtaaatacatctgtgaggagtgtgggatccgctgcaagaagcccagc
atgctgcgtaaacacatccgcacccactctgacgtacggccctaccactgcacccactgc
aacttctccttcaagactaaagggaatctgaccaagcatatgaagtccaaggctcacagt
aagaagtgcatggagatgggggtgtctgcaggcctcgaggaccatgatacagaggactca
ggagaccgtagccaggtgggcagtacagaccgcccagattcagacggagaggactcggag
ggcgctgacgatgacaacgatgatgacaacgaagaagaggaagaggacagccaggctgag
tcgggcctgtccaccaacccctcggtctcggccagcccccagcacataccctcctccctc
caggctgagctccctcccagctccctcctggctcagatgtccatccaccaccaccaccca
gctcccctgtcactcccccagctccccgcatccgactcccacacccaccacacccacaac
gcctcagacacagagtccgtgcccatgctgagccccgtctccctggtcaagcagatgtca
atctccggagggtgctcaagccctggccccctaccctactccccacccccccacacctcc
gacactgagtcggtgcacatgatgagccctgtctcgccgtgcaggcagatgtccatcgac
taccccgatgttgacgtgccccctagtcccccagtaccaggcaagggctgttccaagctc
ggccaggatggctctttggctcctcctaccctaccaacgagtgagccaggtgtccctttc
gggacagacgtcagcactcagaccgcctctttcaccccccagacttcctcctacagcccc
tggcactttccctcccagggcccgacccaaggatcaggggccacacaggggggacacacg
cacctcttcagtcacctgcctctgcactcccagcagccctcttgctcctcctacagcatg
gtccccgtggggggcatccagctggtgccagctggcctgccagcctactccaccttcgtg
cccatccaggctggcactgtccagctcaccatccctgcagtgagtgtcatccaccggaat
accagtccactcccgttccccaaatcctctaactccccccagcctgagggctctgccttg
acccccaccaaccagcccctggtggttcaggagcccatcagcagtatcatgccctgcttc
cccctggggcaggtcaccggacttcaggcccttggggcctcccagcagacgctgcagtcc
atgggtctggagaccctcaacgtcatgggactgaccagctcaggaggcctgacctccact
cagctgctgtcccagcacggcctgacgctcaacgccaccctgggcctgcaggccctgact
gccagccccagctcccagagcagcacgggcccccaccatcaccacacccaccacacaccc
atccccggcctgcagatcctcaacattgccctgcccgcactcatcccctcgctcagccct
ctctccgccctcagtcccctccctggaccctctgagaggcagggcagccctgaggcccaa
ggggccacccgactctcctctcagactgaactaggacccttggtcagctgtccatctgct
gcaccgtcccttcccactgccaccatgagaggaagtcccgcccaggaaatgacatcatcg
ggcagcagacccagcagctctgggcacaggagttccggaggctctgatcacatgcagact
cccgggaaggaagggagagttacaacatctctaccacaaccctccccggctccagctgct
gatggggttgttgagcgggcagggggagccagtgagcctgtcatgcctcggaggcagtcg
atgctgtcacggcagcaggtgacggaagactttatcgatgactcagcatcaagcgatgac
gaggaccgactggtcatcgccacctga
DBGET
integrated database retrieval system
