Oncorhynchus nerka (sockeye salmon): 115133111 Help Entry 115133111         CDS       T07952                                  Name (RefSeq) filamin-C-like isoform X1   KO K27393   filamin-C Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:one00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     115133111  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:one04812]     115133111 Cytoskeleton proteins [BR:one04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      115133111   Intermediate filaments    Intermediate filament-binding proteins     115133111 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Filamin CH Big_3_5 Y_Y_Y YtkA CFSR CH_2 Motif Other DBs NCBI-GeneID:  115133111 NCBI-ProteinID:  XP_029521863 EnsemblRapid:  ENSONEG00000001840 LinkDB All DBs Position LG8:6077079..6175889 Genome browser AA seq 2834 aa AA seqDB search MWYKKGTETDNMMSNNTYYEQQQPPQYYKSTDNGDDEEEMPATEKDLAEDAPWKKIQQNT FTRWCNEHLKCLNKRINDLQKDLADGLKLIGLLEVLSQKKMYRKYHARPNFRQMKLENVS VALEFLEREHIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDAKKLTP KQRLLGWIQNKVPQLPINNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREA MQQADDWLGVPQVIAPEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLRSKTLHPKKAKAY GPGIAPRGNMVLKPAEFIVETVEAGLGEVLVYVEDPEGHTEEARVIPNNDKNRTYSVIYL PKVEGLHKVKVLFAGQDIDRSPFVVSVSKAMGDPNKVQARGPGLEPVGNVANKPTYFDIY TAGAGAGDVGVIIVDSQGRRDTVEIILENKGDSIFRCTYCPILEGSHVIYVTFAGQQIPR SPFTVHISEAPPSSLPPGSPVQIVPQSIRTPPTDKAKRVPPPTPPKPRRPTSNPNVCRAS GRGLQPKGVRVKEVADFKVYTKGAGSGELKVTVKGPKGLEEPVKVRDAGEGVYECDYYPI MTGKYTITITWGGQTIPRSPFEVVVSEDVGPQKVRAWGPGLETGMVGKSADFVVEAIGTE VGTLGFSIEGPSQAKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILL TANDVFPEKVKSYGPGLEPIGCIVNKPAEFTIDTSRAGRGQLKIYAQDAEGFPIDIQITE NGDSTFLCVYIPTKPIKHTIIITWGEVNVPNSPFRVTIGEGSHPDNVKVYGPGVEKSGLK ANEPTYFTVDCCEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYMPPGPGR YTIMVLFADHEIPISPFRIKVDPSHDANKVRAEGPGLNKTGVEVGKPTHFTIYTKGAGKA KPEVHFTGAAKGDAVRDFEIIDNHDYSYTVRYTAVQQSNMSISICHGGDPIPKSPFNITV APPLDLNKVKVQGLNNKVDVGKDQEFTVSTHGVGGQGKIDVKITSPSRRPIPCKLESDTS NEVHTVKYIPPEEGPYKVDISYDGNPVPGSPFNVEGMMPPDPSKVRAYGPGLQGGMVGKP APFAIDTKGAGTGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYAINILFAEQHI PGSPFKAMVQSVFDPSKVTASGPGLERGKVNEAGSFVVDCAKAGEAELTIEIISDSGSKA EVRVQNNSDGTYSITYIPQFHGMYTITIKYGGHAVPKFPARVQVDPAVDTSGVKVYGPGV EPRGVLREVTTHFIVDARAKSKTGGSHVKARIVNPTGANTDAYITDKGEGTYRVEYTAYE DGMHLIEVLYDDVAVPNSPFRVPVTEGCDPSRVRAYGPGLEEGLVNKPNRFTVETRGAGT GGLGLAIEGPSEAKMSCKDNKDGSCSVEYIPFTPGDYDVNITFGGLPIPGSPFRVPVREL VDPSKVRCSGPGLGSGVRAHVLQTFTVDTSKAGLAPLGVVLYGPTGVAEPVNITDNGDGT HTATYTPAKDGPYTVCVKYADQEVPRSPYKIKTLPAHDASKVRASGPGLNAQGVPASLPV EFTIDARDAGEGLLTVQILGPDRSRREASVFVEDWGRRVWEKHIVKGTIPFSILKKGSDP ESKPKKANIRDNRDGTYTVSYVPDMAGRYTITIKYGGDEIPYSPYRIHALPIGDASKCLV TVSIGGHGLGSGLGPTIQIGEETVITVDAKAAGKGKVTCKVSTPDGAELDVDVVENSDGT FDIYYTAPEPGKYVITIRFGGEHIPNSPFHVVASDTVPIIEEPCDKLQLQQPYQAYQGYP PHWATEEPVTPGDIMEPMLRPFNLVIPFTVQKGEITGEVRMPSGKTARPNITDNKDGTVT VKYAPTEKGLHEMDIKYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSHGMVNKPATFTIV TKDAGEGGLSLAVEGPSKAEINCKDNKDGTCTVSYLPTVPGDYNIIVKFDNKHIAGSPYT AKITGDDTMRTSQLNVGTATDVSLKISETDLSSLTASIRAPSGNEEPCLLKRLPNRHIGI SFTPKEVGEHVVSVMKNGTHVTNSPFKIMVGQSEIGDASKVKVFGQGLVEGHIFEVAEFI VDTRNAGYGGLGLSIEGPSKVDINCEDVEDGTCKVTYCPTEPGNYIINIKFADQHVPGSP FTVKVCGEGRVKESITRKRHAPSIATVGSTCDLNLKIPGNWFQMVSAQERHTRTFTRSSH TYTRTERTEISKTQAGETKREVRVEESTQVGGDPFRDVFGEFLGSQSLTGFSGIPATTRQ PQEGVCVTQEGDQGTQEMTAQVTSPGGKTEDAEIIDGEDSTYSVRFIPQEMGPHTVNVKY RGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLDRGVAGVAAEFSIWTREAGAGGLSIAVE GPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSIKFNDEHIPDSPFIVPIATLSDNSRRLT VTSLQEMGLKVGQEASFAVQLNGARGLIDAKVHTPSGAVEECYVTELDSDQHAIRFIPRE NGVHSIEVRFNGSHIPGSPFKIRVGEIGQVGDPGMVSAFGPGLEGGTTGAASDFVVNTCN AGSGALSVTIDGPSKVKMDCQDCPEGYKVTYTPMAPGSYLITIKYGGPSHIVGSPFKAKV TGARLSGGHSLHETSSVLVETVTKTSSSSSSMGVAYGPKFSSDASKVVSRGAGLSKAFVG QKNNFTVDCSKAGTNMLMVGVHGPKTPCEEVYVKHLGNRMYNVTYTVKEQGNYILIVKWG DENVPGSPFHVTVP NT seq 8505 nt NT seq  +upstreamnt  +downstreamnt atgtggtataaaaagggcacggaaaccgacaacatgatgagcaataatacgtactacgag cagcagcagccgccgcagtactacaagagtacggacaacggggacgacgaggaagagatg ccggctacggagaaggacctcgctgaggatgcgccctggaaaaaaatacaacagaacacc ttcaccaggtggtgcaacgagcacctcaagtgcctcaacaagcggatcaacgacctacag aaagacctggccgacgggctcaagctcatcggtcttctggaggttttgagccagaagaaa atgtacagaaagtaccacgccagacctaacttcagacaaatgaaactggaaaatgtgtcc gtcgcgctggaattcttggagagagaacacatcaagctggtatcgatagacagtaaggcc atcgtggatgggaacctgaagcttatcctgggtctgatctggactctgatcctgcactac tccatctcaatgcccatgtgggaggacgaggacgatgaggacgccaagaagctgaccccc aagcagaggctgctgggatggatccagaacaaggtgccccagctgcccatcaacaacttt caccgtgactggagggacggcaaggccctgggagccctggttgacaactgtgccccaggc ctgtgtcctgactgggagacgtgggatcctagccagcctgtggagaatgccagggaggcc atgcagcaggctgacgactggctcggagtgccccaggtgatagcccctgaggaaatagtg gatcccaatgtggacgagcactcggtgatgacctacctgtcccagtttcccaagtccaag ctgaagcctggtgccccgctgcgctccaagactctgcaccccaagaaggccaaggcctac ggaccaggtattgcgcccagaggtaacatggtgctgaagccggctgagttcattgtggag acagtggaggcggggctaggggaggtgctggtctatgtggaggacccagagggacacaca gaggaggccagagtgatccccaacaatgacaagaacaggacgtactctgtcatctacctg cccaaagtggagggccttcacaaggtgaaggtgcttttcgctgggcaggacatagacagg agtcccttcgtggtgagtgtgtccaaagccatgggagaccccaacaaggtgcaggccaga ggaccaggactggagcctgtaggcaacgtggctaacaagccgacctacttcgacatctac acagcaggtgctggtgctggagacgtgggtgtaatcatcgtggactcccagggcagaaga gacaccgtggagatcattctggaaaacaagggggacagtattttccgttgcacctattgc cctatcctggaggggtctcatgttatctatgtgacgtttgctgggcagcaaatacccaga agccctttcaccgtccacatctcagaggctccaccgagctccctgccccccggctctccg gtgcagatagtgccccagtccatacgcaccccacccacagacaaggccaagagagtgccc cccccaacaccgcccaaacccaggcgaccaaccagcaaccccaacgtgtgccgggcctca gggagaggtctccagcctaagggggtgagggtgaaagaggtggccgacttcaaggtctac accaagggagccggcagcggagagctcaaggtcaccgtcaaggggccaaagggactagag gagcctgtgaaggtgcgtgacgcgggagaaggggtgtatgagtgtgactactaccccatc atgactggcaaatataccatcaccatcacctggggcggacagaccatcccacgcagcccg ttcgaggtggtggtgagtgaggatgtggggccccagaaggtgagggcgtgggggccgggc ctggagacaggcatggtggggaagtcagctgactttgtggtggaggccatcggcacagag gtgggaactctgggtttctccatcgagggcccgtcgcaggctaagatagagtgtgatgat aagggcgacgggtcatgtgacgtacgttactggcccacggagcctggcgactacgctgtt cacgtcatctgtgacgacgaggacatcaaggacagcccctttatggcccacatcctcctc acagccaatgacgtgttccctgagaaggtgaagagctatggcccaggtctggaacctatt ggctgcattgtcaacaaaccagcagagttcaccattgatacaagtagagctggcaggggc cagctgaagatatacgcccaggatgcagagggcttccccatagacatccagatcacagag aacggagacagcaccttcctctgtgtctacattcccaccaagcccatcaaacacaccatc attatcacctggggagaggtcaacgtccccaacagtcccttcagggtgaccatcggagag ggcagccacccagataatgtgaaggtgtacggtccaggtgtggagaagtcaggtctgaag gccaacgagcccacctacttcactgtggactgctgcgaggcaggacaaggggatgtcagt atcggcatcaagtgtgctcccggcgtggtgggtccggcagaggcagacatcgactttgac atcatcaagaacgacaacgacacgttcacagtgaagtacatgccccccggccccggacgc tacaccatcatggtgctgttcgctgaccacgaaatacccatcagccctttcagaatcaag gtggacccctcccatgacgctaacaaggtgagggcggagggacccggactcaacaagaca ggtgtggaggtaggtaagcccacccacttcaccatctacaccaagggagcgggcaaggcc aagcctgaagtgcacttcaccggagcagccaaaggggacgctgtccgagactttgagatc attgacaaccatgactactcctacaccgtgcgctacactgcagtgcaacagagtaacatg tctatctcaatctgccacggcggtgaccccattcccaagagccccttcaacatcactgtg gcgccgccccttgacctcaacaaggtcaaagttcaggggttgaacaacaaggtcgacgtt gggaaggatcaggagttcacagtgagcacacacggcgtcggtggccagggcaagatagat gtgaagatcacctcgccctctcgtcggccaatcccctgcaagctggagtctgacacgtcc aacgaagtgcacactgtgaagtacattccccctgaggagggcccctacaaagtggacatc agctatgatgggaaccctgtgcctgggagccccttcaacgtggaggggatgatgccccct gacccctcaaaggtgcgtgcctatggcccaggcctccaggggggcatggtgggtaagccg gcccccttcgccattgacaccaagggtgcgggcaccggcgggctgggcctgactgtggag gggccatgcgaggccaagatcgagtgccaggacaacggcgacgggtcctgctctgtctcc tacctgcccacagagcccggcgaatacgccatcaacatcctgtttgccgagcagcacatc cccggctcccccttcaaggccatggtacagtccgtgtttgaccccagtaaggtcacggcc agtgggccaggcctggagagagggaaggtcaacgaggcagggtcgttcgtagtggactgc gccaaggctggggaggccgagctgaccattgagattatttctgattcggggtcgaaggcg gaggtgcgtgttcagaacaacagtgatgggacctattctatcacgtacatcccacagttc catggcatgtatactatcaccatcaaatacgggggccacgccgtgcccaagttccccgcc cgtgtgcaggtggacccagccgtggataccagcggggtgaaggtgtacggaccaggagtg gaacccagaggggtcctgagggaggtgaccacccatttcattgtggatgcccgtgccaag agcaagaccgggggcagccatgtcaaggcccgcatcgtcaaccctacaggcgccaacaca gacgcctacatcactgacaagggggaaggcacctacagagtggaatacactgcctatgag gatgggatgcacctgattgaggtgctgtatgatgatgtggcggtgcctaacagtccgttc cgtgtcccggtaacggagggttgtgaccccagccgcgtcagagcctacggtcctggtctg gaggagggcctggtcaacaaacccaaccgcttcaccgtggaaaccaggggtgctggtaca gggggtctgggtctggccatcgagggtccatcagaggctaagatgtcttgtaaggacaat aaagatggcagctgcagtgtggagtacatccccttcaccccgggagactatgacgtcaac attaccttcggaggcttgcccatcccagggagtcctttccgtgtgccagtgagagagctg gtggacccaagtaaggtgaggtgttcaggcccagggctgggtagtggagtcagagcccat gttcttcagaccttcactgtggacaccagcaaggctggcctcgcccctctgggagtggtg ctgtacggaccaactggagtggctgagccagtgaacatcacagataatggagacggaaca cacacagcgacctacacaccggccaaggacggcccgtacaccgtgtgtgtgaagtacgct gaccaggaggtccctcgcagtccgtataagatcaagacattgcctgctcatgatgccagt aaggtgcgtgccagtgggccaggtttgaacgcccagggtgtgcctgccagcctgcccgtg gagttcaccatcgatgcccgcgatgctggcgaaggtttgctcactgtgcagatactgggt ccggatcggtccaggcgcgaggcctcagtgtttgtggaggactggggcaggagggtatgg gagaagcatatagtcaaggggaccatacccttcagtattcttaagaaaggctccgaccca gaaagcaagccgaaaaaggccaatatccgtgacaacagagacgggacgtacacggtgtcc tatgtaccagacatggcagggcgctacaccatcactatcaagtatggaggagacgagatt ccctactcaccctatcgtatccatgccctgcccattggagacgccagcaagtgtctggtc acagtttccatcggaggacatggattgggttcaggcctcggacccaccatccagatcggc gaggagaccgtcatcaccgtggacgcaaaagctgctgggaagggaaaggtgacctgtaag gtgtcgacgccagatggggcggagctagacgtggacgtggtggagaattccgacggaacg tttgacatctactacacggctccggaacccgggaaatacgtcatcaccatccgctttgga ggagaacacattccaaacagccccttccacgtggtggccagtgataccgtccctataata gaggaaccgtgtgacaagctccagttacaacagccctaccaggcctaccagggctacccc cctcactgggccacagaggagcccgtcacccccggcgatatcatggagcctatgctccgc cccttcaacctggtcattccgttcaccgttcagaagggagagatcacaggtgaggtgcga atgccctcaggtaagacagcccgtcctaacatcacagacaacaaggatgggacagtcaca gtgaagtacgcccctacagagaaaggcctgcacgagatggacatcaaatatgacggaaac cacatcccaggaagtcccctccagttctatgtagatgccattaacagtggtcatgtgaca gcctatggtcctggtctgagccacggcatggtcaacaaacctgccaccttcaccatcgtc acgaaggatgcaggggaaggtggtctgtccctggcggtggagggtccctctaaggcagag atcaactgtaaggataataaggatggaacctgcactgtgtcctaccttcccactgtacca ggagactacaacatcatcgtcaagtttgacaacaaacacatcgccggcagcccctacact gccaagatcacaggagatgacactatgaggacatcccagctcaacgtcggcacggcaaca gacgtgtcattgaagatctcagagacagacctgagcagtctgacagcgagcatcagagca ccgtcgggcaacgaggaaccctgcctcctcaagagacttcccaatcgacacatcggtatc tcattcactcctaaggaggtaggggagcatgttgtgagtgtgatgaagaacgggacgcac gtgaccaacagccccttcaagatcatggtgggccagtcagagatcggcgacgccagcaag gtcaaggtgtttggccagggactggtggagggacacatctttgaggtggctgagttcata gttgacaccaggaacgcaggttatggtggtctgggcctgtctatcgagggtcccagtaag gtggatattaactgtgaggatgtggaggatggtacctgtaaggtgacctactgtcccact gaaccaggaaattacatcatcaacatcaagttcgccgaccagcacgtcccaggaagtcct ttcacggtgaaggtgtgtggtgagggcagggtgaaggagagcatcactaggaagagacat gctccatccattgctactgtgggcagcacctgtgacctcaacctcaaaataccaggtaat tggttccagatggtgtcggcccaggagcggcatacgcgcacgttcacgcgcagcagtcac acgtacacgcgaacggagcgcacagagattagtaaaacacaggcgggggagaccaagcgg gaggtgcgcgtggaggagagtacccaggtcgggggagaccccttcagggacgtgtttgga gagttcctgggtagtcagagtctcacaggcttcagtgggataccagccactaccagacag cctcaagagggtgtgtgtgtgacacaagagggtgaccaggggacccaggagatgacggcc caggtgaccagtccggggggtaagacggaggacgcagagatcatcgacggcgaggacagc acctacagcgtccgcttcatcccccaggagatggggccccacacggtcaacgtcaagtac aggggccagcatgtccccgggagccccttccagttcaccgtggggcccctgggagaggga ggggcacacaaggtccgggctgggggcacggggctggatagaggagtggcaggagtggca gctgagtttagtatctggaccagagaggctggtgcaggaggtctgtccatcgctgtagag gggcccagtaaggcagagatcagctttgaagacaggaaggatggatcctgcggagtggcc tatgtggtgcaggaaccaggtgactatgaggtgtccattaagtttaatgatgagcacatc ccagacagtcccttcatagtccccatcgccactctgtctgataactcacgccgccttaca gtcaccagcctacaggagatgggattgaaggtgggccaggaggcgtcgttcgcggtgcag ttgaacggggcgagggggttgatagatgctaaggttcacaccccgtccggagctgtagag gagtgttatgttactgagctggacagcgaccagcacgccatccggtttatcccgagggag aacggagtccactccatcgaagtgcgtttcaacgggagccacattcccggtagtcccttc aagatccgcgtgggagagatcggacaagtcggagacccgggaatggtgtcagccttcgga ccggggctggaaggaggaaccacaggcgcggcgtcagattttgtagtgaacacgtgtaat gcggggtcgggtgctctgtcagtgaccatcgatgggccgtccaaggtcaagatggactgt caggattgtcccgagggttacaaggtcacctacacacccatggcccccggcagctatctc atcaccatcaaatacggaggaccatcccacatcgtaggcagccccttcaaggctaaagtc acaggtgctcgtctctctggtggtcacagtctacatgaaacctcgtccgttcttgtggag acagtaaccaagacgtcgtcgtcttcgtcgtcgatgggcgtggcctatggccctaagttc tcttcggatgccagtaaggtggtctcccggggcgccggcctatcaaaggcctttgtaggg cagaagaacaacttcacagtagactgcagcaaagcaggaactaacatgttgatggtgggg gtacacggcccaaagaccccgtgtgaagaggtctacgttaaacacctgggcaacaggatg tacaacgtcacctacaccgtcaaagaacagggcaactacatcctcatcgtcaaatggggg gatgaaaatgtccccggcagccccttccatgtcaccgtcccctaa

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