KEGG   Oncorhynchus nerka (sockeye salmon): 115134584
Entry
115134584         CDS       T07952                                 
Symbol
snupn
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115134584 (snupn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115134584 (snupn)
Spliceosome [BR:one03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    115134584 (snupn)
SSDB
Motif
Pfam: Snurportin1 mRNA_cap_enzyme DNA_ligase_A_M
Other DBs
NCBI-GeneID: 115134584
NCBI-ProteinID: XP_029524595
EnsemblRapid: ENSONEG00000035594
LinkDB
Position
LG9a:complement(40276841..40305048)
AA seq 381 aa
MDDLTQALSASFAVSKEANSTAAPHPRMAQYKTKFSVLEQSERRRRFLDLQKTKRLNYVN
HARRLADGDWTGTDSDEEAVVVDRKEEEQQKEKDAEDDGMEIERKKLPKYYANQLMLSEW
LVDVPQELDTDWLMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVERTYFILDVMCWRGHPVYDCPTEFRFYWLQSKVQETDGMADIAKRNP
FKFVSLQSTACSTEAIQQALATEYNFNVDGLLFYHRQTHYTPGSTPLVGWLRPYMVVDIL
GMEVPLGPLTAKPEYAGHQLAQIREHKKTSDHVRPGDLNGRYELEHLSTPDQEKGDGETA
TSPRSRPLKESRMETSEKSTS
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggatgacctaacccaagctctctcggccagcttcgccgtctcgaaggaggccaacagc
acagcggccccccacccacggatggcccagtacaagaccaagttcagcgttttggagcaa
agcgaacgacgacggcgctttctagatctgcagaaaacgaaaaggctgaattatgtcaac
catgcacgccgtctggctgatggggactggacagggacagatagtgatgaggaagcagtg
gtggtggacagaaaggaggaggaacagcagaaggagaaggatgcagaggatgatgggatg
gagattgagaggaagaagttgccaaagtactatgccaaccagctcatgctgtcagagtgg
ctagtggacgtccctcaggaactggatactgattggctcatggtggtctgtcccgtgggg
aagcgctctctcatcgtcgcctccaaggggtccactgcagcatacaccaaaagtggctac
tgtgtgaaccgcttcccttctctgttgcctggagggaacagacacaactcagcaatggga
aaagattacaccatcctggactgtatctacagtgaggtggagcggacctacttcatcctg
gatgtcatgtgttggaggggccatcctgtgtacgactgtccaacagagttccggttctac
tggctccagtcgaaagtccaggagacggatggcatggctgacattgccaagaggaaccct
ttcaagtttgtgagtcttcaaagcactgcctgctcaacggaagccattcagcaagcactt
gcaacagagtacaacttcaatgtggacggacttctgttttaccaccggcagacccactac
acccccggcagcacccctctggtgggctggctgcggccctacatggtcgtcgatatcctg
ggcatggaggtcccgttggggcccctcaccgccaagcccgagtatgccggccaccagctg
gcccagatccgggagcacaagaagacctccgaccatgtccggccaggagacctgaacggc
cgctacgagctggagcacctatccacccccgaccaggaaaagggagatggcgagaccgcc
acctcgccccgcagcagaccgctgaaggaatctcgcatggaaacctcagagaagagcacg
agttag

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