Oncorhynchus nerka (sockeye salmon): 115134584
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Entry
115134584 CDS
T07952
Symbol
snupn
Name
(RefSeq) snurportin-1
KO
K13151
snurportin-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115134584 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115134584 (snupn)
Spliceosome [BR:
one03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
115134584 (snupn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snurportin1
mRNA_cap_enzyme
DNA_ligase_A_M
Motif
Other DBs
NCBI-GeneID:
115134584
NCBI-ProteinID:
XP_029524595
EnsemblRapid:
ENSONEG00000035594
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All DBs
Position
LG9a:complement(40276841..40305048)
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AA seq
381 aa
AA seq
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MDDLTQALSASFAVSKEANSTAAPHPRMAQYKTKFSVLEQSERRRRFLDLQKTKRLNYVN
HARRLADGDWTGTDSDEEAVVVDRKEEEQQKEKDAEDDGMEIERKKLPKYYANQLMLSEW
LVDVPQELDTDWLMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVERTYFILDVMCWRGHPVYDCPTEFRFYWLQSKVQETDGMADIAKRNP
FKFVSLQSTACSTEAIQQALATEYNFNVDGLLFYHRQTHYTPGSTPLVGWLRPYMVVDIL
GMEVPLGPLTAKPEYAGHQLAQIREHKKTSDHVRPGDLNGRYELEHLSTPDQEKGDGETA
TSPRSRPLKESRMETSEKSTS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctaacccaagctctctcggccagcttcgccgtctcgaaggaggccaacagc
acagcggccccccacccacggatggcccagtacaagaccaagttcagcgttttggagcaa
agcgaacgacgacggcgctttctagatctgcagaaaacgaaaaggctgaattatgtcaac
catgcacgccgtctggctgatggggactggacagggacagatagtgatgaggaagcagtg
gtggtggacagaaaggaggaggaacagcagaaggagaaggatgcagaggatgatgggatg
gagattgagaggaagaagttgccaaagtactatgccaaccagctcatgctgtcagagtgg
ctagtggacgtccctcaggaactggatactgattggctcatggtggtctgtcccgtgggg
aagcgctctctcatcgtcgcctccaaggggtccactgcagcatacaccaaaagtggctac
tgtgtgaaccgcttcccttctctgttgcctggagggaacagacacaactcagcaatggga
aaagattacaccatcctggactgtatctacagtgaggtggagcggacctacttcatcctg
gatgtcatgtgttggaggggccatcctgtgtacgactgtccaacagagttccggttctac
tggctccagtcgaaagtccaggagacggatggcatggctgacattgccaagaggaaccct
ttcaagtttgtgagtcttcaaagcactgcctgctcaacggaagccattcagcaagcactt
gcaacagagtacaacttcaatgtggacggacttctgttttaccaccggcagacccactac
acccccggcagcacccctctggtgggctggctgcggccctacatggtcgtcgatatcctg
ggcatggaggtcccgttggggcccctcaccgccaagcccgagtatgccggccaccagctg
gcccagatccgggagcacaagaagacctccgaccatgtccggccaggagacctgaacggc
cgctacgagctggagcacctatccacccccgaccaggaaaagggagatggcgagaccgcc
acctcgccccgcagcagaccgctgaaggaatctcgcatggaaacctcagagaagagcacg
agttag
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