Oncorhynchus nerka (sockeye salmon): 115138605
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Entry
115138605 CDS
T07952
Name
(RefSeq) plexin-A2-like
KO
K06820
plexin A
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
TIG_plexin
Sema
PSI
RasGAP
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
115138605
NCBI-ProteinID:
XP_029531498
EnsemblRapid:
ENSONEG00000022892
LinkDB
All DBs
Position
LG2:complement(35044352..35101478)
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AA seq
1908 aa
AA seq
DB search
MGMGMCLDIGCIYSGSTKGQSWSLTRWLLVLMPISLAMGQGQSQSLNTFKSERREWTLNH
LIVHKTTGALYVGAVNRIYKLSANLTLLVSHDTGPEYDNKACYPPLIVQPCSEPLASTDN
INKLLLIDYSHNRLLACGSLYQGVCKLMRQDDLFILVEPTHKKEHYLSSVNQTGTMYGVI
VPSSLGQDGTLFIGTAVGGKQDYFPTISSRKLPRDPESSAMLDYELHTDFVSSLIKIPSD
TLALVPRFDIYYIYGFASGNFVYFLTVQPETPENGMPAGSSPGDLFYTSRIIRLCKGDRK
FHSYVSLPVGCVHKGEEYQLLQGAHLSKAGKVLARSLNISAQDDVLFAVFTKGQKQYHEP
LDNSALCIFTIRDINARIKERLQSCYQGEGNLELHWLLGKDVQCTKAPVPIDDHFCGLDI
NQPLGGSQLVSGLTVYTETRDRLTSVISYIYNGYSVAFLGTRSGRLKKIRVDGPPEGGGQ
YETLTVMTDGSPILRDMAFTLDRNFLYIMSDSLVTKVPVEACEQYGTCGECLSSEDPHCG
WCVLHNMCARRDRCQRAEEPFRFATDIERCVKIIAHPDSIAVSAHSVPLLLEVSNVPDLS
AGISCAFGEQAEMEGHVNGNRVMCLSPSGKEVPHIPEGQDWLSVELRLNSKETGQMLGST
EVKFYNCSMHHTCLSCVNSTFHCHWCKYRNLCTHNPSSCSFQEGRVNASEDCPQLLHSGE
ILIPAGEVRPITLRARNLPQPQSGQRGYECVLHVQGNNHRVTALRFNSSSVQCQNSSYIY
EGVKISDLAVDLSIVWNGNFIIDNPEKIKVHLYKCGAQRDSCGMCLRAEKKFQCGWCSGE
GRCTMKQHCSPISPYVSRWLNLSGRNVKCTNPRITEVSPVAGPPEGGTLVTIQGMNLGLS
FSELLGNVEVAGVHCTPQEEGYITAEQIVCEMDSTSQGRAPGPVQLCVGECRPELQTQSS
QLYSFVTSNLVGLTPGRGPESGGTKVTIVGENLGAGSRVNVTFGNQTCELYRRTMSEIVC
FSAPSVTGAGLVQVSLIVDLAKVPGNLSFEYIEDPTVQRIEPEWSITSGHTTLMVTGTNL
DVVQEPRVRVKYAGHESVNVCKVLNTTTISCFAPSLKAEYTPEQESVKHVEEFGFVFNNV
QALLTYNSTSFIYYPNPYLEPLSLSGVLEQKPGSPIILKGRNLVPSASGGARLNYTVLIG
DTPCSLTVSDTQLLCEPPNLTGRHKVLVQVGGLHISPGAVHIRSDSLLTLPAIFSITAGG
GLLLIIVFIVLLAYRRKSHENDLTLKRLQMQMDNLESRVALECKEAFAELQTDINELTSD
LDRAGIPHLDYRTYTMRVLFPGFDDHPVLRELEVSGSGQQGVEKALKQFAQLVNNKVFLL
TFIHTLELQRSFSMRDRGYVASLIMTALQGRLEYATDVLKHLLSDLIERNLESKNHPKLL
LRRTESVAEKMLTNWFAFLLHKFLKECAGEPLFMLYCAIKQQMEKGPIDCITGEARYSLS
EDKLIRQQIDYKTLTLSCVNPDNENSPEFPVKVLNCDTITQVKEKILDAVCRNMHFSQRP
RAADMDLEWRQGRTARVVLQDEDITTKIEGDWKRLNTLMHYQVSDHCVVALVPKQMSSYN
LPSSASFPRSISRYDVPFRSTPTSPDSPHSRVPMLTPDMESGVKVWHLVKNHDHGDQKEG
ERGSKMVSEIYLTRLLATKGTLQKFVDDLFETLFSTVCRGSALPLAIKYMFDFLDEQADK
HGIHDMDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSSITDACLSVVAQTFMDSCSTSE
HRLGKDSPSTKLLYAKDIPNYKSWVERYYADINRLPAISDQDMNAYLAEQARLHSNEFNV
LCALHEMYAYVSKYSQEIIEALEQDEQAQKQRLAYKVEQIITAMSVES
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggggatggggatgtgtttggatataggatgcatttacagcggaagtactaaggggcag
tcatggtccctgacgcggtggctgttggtcttgatgcccatctccctagcaatgggccaa
ggccagtcccagtccctcaacaccttcaagtcagagagaagggaatggaccctgaaccac
ctgattgtgcacaagaccactggcgctctctatgttggtgctgtgaaccggatttacaag
ctatctgccaacctgaccctcctggtctcccatgacacaggacctgagtacgacaacaag
gcctgctaccctcctcttatagtgcagccctgctctgagcccctggcctccactgacaac
atcaacaaactgttgctcatagactactcccacaaccgcctgctggcctgcggcagcctc
taccaaggcgtctgtaagctaatgcgacaggacgacctgtttatcctggtggagcccacc
cacaagaaagagcactacctctccagtgtcaaccaaacaggcaccatgtatggggtcatc
gtgccctcttcactgggccaggacggcaccctgttcatcggcacggccgtgggtgggaag
caggactacttccctaccatctccagtcgtaagctgccccgtgacccagagtcatctgcc
atgctggactacgagctccacactgactttgtctcctctctcattaagatcccctctgac
acgctagctctggtcccgcgctttgacatctactacatctacggctttgccagcgggaac
tttgtctacttcctgaccgtgcagccagagaccccagagaatgggatgcctgctggcagt
tccccaggtgacctgttctacacaagccgcatcatacggctctgcaaaggggacaggaag
ttccactcttatgtgtcactgccagtgggctgtgtacacaagggagaggagtatcaactc
ctacagggcgcccacctgtccaaggcagggaaagtactggccaggtccctcaacatcagt
gcccaggatgacgtcctctttgctgtgttcaccaagggccagaagcagtaccacgagccc
ctggacaactcagccctgtgtatctttaccatacgagacattaacgcccgcatcaaagag
cgcctgcaatcctgctaccagggagagggcaacctggaactacattggctactgggaaag
gatgtgcagtgcaccaaggcgcctgtgcctatcgatgatcacttctgtgggctggacatc
aaccagcccctggggggctcccagctggtatctggcctgactgtgtacactgagaccagg
gacaggctgacctcggtcatctcttacatctataacggctacagcgtggccttccttggc
accaggagtggcagactgaagaagatccgagtggatgggcctccggagggcggggggcag
tatgagaccctgaccgtgatgacagatggcagtcctatcctccgagacatggccttcact
ctggaccgcaactttctctacatcatgtctgacagtctggtgaccaaggtcccagtggag
gcatgtgagcaatacgggacctgcggagagtgtctgagctctgaggatcctcattgtggc
tggtgtgtcttgcacaacatgtgtgccagaagagaccggtgtcagagagcagaggagcct
ttccggttcgccactgatatcgaacgttgtgtgaaaattatcgctcacccagacagcatc
gccgtgtcagcacacagtgttcccctcctattggaggtgagcaacgtgcctgacctctca
gctgggatcagctgtgcctttggagagcaggcggagatggagggtcatgtcaacggcaac
agagtcatgtgtctgtccccgtctggcaaggaggtcccacacatacctgaaggacaggac
tggttgagtgtggagctgcgtctgaactctaaggagacaggtcaaatgctgggcagtaca
gaggtcaagttctataactgcagcatgcatcacacgtgtctgtcctgtgtgaacagtacc
ttccactgccactggtgtaaataccgcaacctgtgtactcacaacccctccagctgctcc
tttcaggagggccgggtcaatgcctcagaggactgcccccagctgctgcactctggagag
atcctgatcccagcaggggaggtgagacccatcaccttgagggcccggaaccttccccaa
ccccagtctggccagcggggttacgagtgtgtgctccacgtccagggaaacaaccaccgc
gtcaccgccctgcgctttaacagctccagtgtgcagtgtcagaacagctcgtacatctat
gagggtgtaaagatcagtgacctggcggtggacctttctatcgtttggaacggcaatttc
atcatcgacaatcccgagaagattaaagtgcacctgtataagtgtggtgcccagcgggac
agttgtggcatgtgtctgagggccgagaagaagttccagtgtggctggtgcagtggagaa
ggccgttgcaccatgaagcagcactgttcacccatcagcccctacgtcagccgctggctc
aacctgtccggcaggaatgtcaagtgtaccaacccacgcatcaccgaggtgagtccagtg
gcagggcctccagagggggggacactggtcaccatacagggaatgaacctgggcctgtcc
ttctcagaactgttggggaacgtggaggtggcaggggtacattgcactccacaggaagag
ggctacatcactgcagaacagattgtgtgtgagatggactctacgtctcagggaagggca
cctggtccagtccagctgtgtgttggtgaatgtagaccagaactacaaactcagtcctcc
cagctctactcctttgtgacctctaacctggtgggactgacccctggccgagggcctgag
tctggcggaactaaggtcaccatcgtgggggagaacctgggtgctggtagcagagtgaat
gttacctttggaaaccagacctgtgagctgtacagacggaccatgtcggagattgtgtgt
ttctcggcaccctctgtgactggcgctggcctggtgcaggtcagcctcattgtggatctg
gccaaggtgccaggaaacctgagctttgagtacattgaggatcccacagtccagcgcatc
gagccagagtggagcatcactagtggacacactaccctgatggtgacggggaccaaccta
gatgtggtgcaggagccgagggtcagggtcaagtatgccggtcacgagtctgtcaacgtg
tgtaaggtgctcaacaccaccacgataagctgctttgctccctccctgaaggcagagtac
acaccggagcaggagtcagtgaaacacgtggaggagtttggttttgtcttcaacaacgtg
caggccctgctcacctacaacagcaccagtttcatctactaccccaacccttacctagag
cccctcagcttgtctggggtgctagagcagaaacctggctctcccatcatactcaagggg
cgtaacctggtgccctcggcatctggaggggccaggttgaactacaccgtgctgatcggg
gacacaccctgttccctcaccgtctctgacacacagctcctctgtgagccacccaacctc
acaggccggcacaaagtcctggtccaggtgggtggtctccacatctctcctggtgcagtc
cacatccgctcagacagcctgctcaccctccccgccatcttcagcatcacggctggagga
ggcctgctgctcatcatcgtcttcattgtcctattggcctacagacgcaagtcgcacgag
aatgacctcactctcaaacgcctgcagatgcagatggacaacctggagtcgcgagtggct
ctggagtgcaaggaagctttcgctgagctgcagactgacatcaacgagctgaccagtgac
ctggacagggctgggatcccccacctggactaccgcacctataccatgagggtcctcttc
cctggcttcgatgaccatcctgtactcagggagctggaggtgtctgggagcgggcagcag
ggagtggagaaggctctgaagcagtttgcccagctggtgaataacaaagtgttcctgctg
acatttatccatactctggaactccagcgctccttctccatgcgtgaccgcggctatgtg
gcctcgctcatcatgaccgcgctgcagggccgcctggagtacgccacagacgtgctcaaa
cacctcctctctgacctcatcgagcgcaacctggagagcaagaaccaccctaaactactg
ctgcgcagaaccgagtcagttgcagagaagatgctgactaattggtttgccttcctactt
cacaaattccttaaggagtgtgcaggtgagcctctcttcatgctctactgtgccatcaag
cagcagatggagaagggacctatcgactgcatcaccggggaggcacgctactccctcagt
gaagacaaactcatccgccagcagattgactacaagaccctgactctgagctgtgtgaac
ccagacaacgagaacagccctgagttccccgttaaggtgctcaactgtgacaccatcacc
caggtgaaggagaagattctggatgctgtctgtaggaacatgcacttctcccagaggcct
cgggctgcggacatggacctggaatggcgccaggggaggacggcacgtgtggtcctgcag
gatgaagacatcaccactaagattgaaggagactggaagagactaaacaccctcatgcac
tatcaggtgtcagaccactgtgtggtagccctggtgcccaagcagatgtcctcgtacaac
ctgccctcctcagccagcttcccacgcagcatcagtagatacgatgtaccattccgctcc
acccccaccagtcctgacagccctcactcccgcgtgcccatgctcaccccggacatggag
agtggggtgaaggtgtggcacctggtcaagaaccacgaccatggggaccagaaggagggt
gagcgtggctccaagatggtgtccgagatctacctgaccaggctactggctactaagggt
acactgcagaagtttgtggatgatctgtttgagacgttgttcagcactgtgtgccggggc
agtgctcttccactcgccatcaagtacatgtttgacttcctggacgagcaggctgacaag
catggcatccatgacatggacgttcgccacacatggaaaagcaactgcctgcctctgcgc
ttctgggtgaatgtgatcaagaacccgcaatttgtgtttgacatccataaaagcagcatc
acagacgcctgtctgtctgtggtggctcagaccttcatggactcctgctctacctcagag
catcgcctgggcaaggactccccctccaccaagctactctacgccaaggacatccccaac
tacaagagctgggtggagaggtactacgcggacataaaccgcctacctgccatcagtgac
caggacatgaatgcctacctggccgagcaggcccgtcttcactccaatgagttcaatgtg
ctgtgtgccctgcacgagatgtatgcctacgtcagcaagtacagccaagagatcattgag
gccctggagcaggatgagcaggcccagaagcagaggctggcctacaaagtagagcagatc
atcacagccatgtctgtggagagctga
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