Oncorhynchus nerka (sockeye salmon): 115138997
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Entry
115138997 CDS
T07952
Name
(RefSeq) chondroitin sulfate synthase 2-like
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one01100
Metabolic pathways
Module
one_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115138997
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115138997
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
115138997
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
115138997
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115138997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
115138997
NCBI-ProteinID:
XP_029532066
EnsemblRapid:
ENSONEG00000003089
LinkDB
All DBs
Position
LG1:complement(10588315..10599754)
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AA seq
766 aa
AA seq
DB search
MRFSMFISLLRPIGPVIIGISLGFTLSLLSVNWVEESCFLNGKASEEISLSQDGNSKGAR
RPNSISTVKDVDAEEDFEPRIVPYKPVQQSKPNHFFRAKYISTELGIREPLFVGILTSKS
TINTLGVAVNRTLSHHLDTVVFFTGMRNRKVPHGMFVVTHGDERLIWNMFQTIKYILEHY
VHEYDWFYLAQDDTYTEADRIKQLVAHLSMDRELYIGSPEEFIGGEMEGRYCYGGFGYIL
SRTLLLRLKPFLENCRNDILSARPDEWLGRCIIDYANTNCVDEHEGLQYYHYEMGKNSDP
SKEDNMQFKNALTVHPVSDPEQMYRLHKHFTEIELQRTYDEIEKLQTEIKNVSEVAYDGN
RSAQWPIGINPPFEPKSRFEVLRWDYFTEEQVYSCIDGFPKCELRGIDRLDVADVIEIAM
GELNKKYKPVLHLKKQQLINGYRRFDPTRGMEYTLDLQLEVVNQKGHSSSITKRVHLVRP
LSRIEIIPMPYVTEATRVHIILPLNVQDRDYVNHFLEVLAANSFETSENAILTFLFIYDP
FEAQQVNQNDIFASVKTQINAYERKYPTVKIPWISVKTETPSQIKFMDIISKKHPVDTLF
FITNVNTNVNSEFLNRCRMNSINNWQVFFPIHFQDYNPDIAFHNQEPPPAVDLVKDAGHF
DRSSFEEACFYNTDYMATRTRMASDMQENEEILETLDIYDMFVRYSTLHVFRAVEPALHQ
KYHYQACNPRLSEDIYHRCVQSNLDGLGARSQLAMLLFEQEQGNST
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagattctcaatgtttatttctctgctgaggccgatcgggccggttattatcggtatt
tctttgggctttaccttaagtttacttagtgtgaattgggtggaggaatcttgtttcctc
aacgggaaagcgagtgaagaaataagtttgtcccaagatgggaattcaaaaggagcaagg
agacccaattcgatatcgacggtcaaagatgtggacgccgaggaagattttgagccaaga
atagtgccatataaaccagtccaacaaagcaaaccaaatcatttttttcgggctaagtac
atcagtacagagctggggatccgggagcccctcttcgtcgggatcctgacgtccaaaagc
accatcaacacattgggagtggccgtgaaccgcaccctcagccaccacctggacactgtc
gtcttcttcaccggcatgcgcaaccgcaaagtgccccacggcatgttcgtggtcacccat
ggggacgagaggctcatatggaacatgttccagaccatcaagtacatcttggagcactat
gtccatgagtatgactggttctatctggcccaggacgacacctacaccgaggcagaccgg
atcaaacagctggtggctcacctgagcatggaccgggagctttacataggcagccctgag
gagtttataggtggggagatggaggggaggtactgctacggtgggttcggatacattctc
tcccgtaccctgttgctccggctcaaacccttcctggagaactgtaggaatgacatcctg
agcgccaggcctgacgagtggctgggcagatgcatcattgattatgccaacaccaactgt
gtggatgagcatgaggggctgcagtactaccattacgaaatgggcaagaactccgatccg
agtaaggaggacaatatgcagtttaaaaatgccttgactgtccacccggtgtctgaccct
gagcagatgtatagactacacaagcacttcactgagatcgaactgcagaggacatacgat
gagattgagaagctgcagacggagataaagaatgtgagtgaagtggcttatgatggcaac
cggagcgcccagtggcccattgggatcaatcctccctttgagcccaagtcccgcttcgag
gtccttcgatgggactacttcacggaggaacaggtgtattcgtgcatcgacggcttcccc
aagtgtgaactgcgcggtattgatcgtttggacgtggccgacgtcatcgagatagccatg
ggggagctgaacaagaagtacaagcctgtcctccacttgaagaagcagcagctgatcaat
ggctaccggcgcttcgaccccactcggggcatggagtacaccctggacctgcagctggag
gtagtcaaccagaaaggtcacagtagctccatcaccaagagggtccacctggtgcgtccc
ctgagtcgcatcgagatcatccccatgccttatgtcacagaggccaccagagttcacatc
atcttaccgctgaacgttcaggatcgagattacgtcaaccattttcttgaagtgttggcc
gcaaattcgtttgagaccagtgaaaacgccatcttgactttcctgttcatctacgaccca
ttcgaggcccagcaggtcaaccagaatgacatcttcgccagtgttaaaacccagatcaat
gcctacgagcgcaagtatccaacagtgaagatcccgtggataagtgtcaagaccgaaacc
ccctctcaaatcaaattcatggacatcatctcgaagaagcacccagtagacactctgttc
ttcatcactaacgtcaacaccaacgtcaactcagagttcctcaaccgttgccgcatgaac
tccatcaacaactggcaggtgttcttcccaatccacttccaggactacaacccagacatt
gccttccataaccaggagcccccacccgcagtagacctggtcaaggacgccggacacttt
gaccgcagttcgttcgaggaggcgtgcttctacaacactgactacatggcaacgcgcaca
cgcatggcctccgacatgcaggagaacgaggagatcctggaaaccttggatatctacgat
atgtttgtcaggtactcaaccctgcatgtgttcagggctgtggagccagccttgcaccag
aagtaccactaccaggcctgtaaccctcggctcagtgaggacatctaccacaggtgtgtc
cagagcaacctggatggcctgggagcccgttcccagctcgccatgctgttatttgaacaa
gagcaaggaaatagcacttga
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