Oncorhynchus nerka (sockeye salmon): 115141870
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Entry
115141870 CDS
T07952
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03440
Homologous recombination
one04068
FoxO signaling pathway
one04110
Cell cycle
one04115
p53 signaling pathway
one04210
Apoptosis
one04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115141870 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
115141870 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115141870 (atm)
04210 Apoptosis
115141870 (atm)
04115 p53 signaling pathway
115141870 (atm)
04218 Cellular senescence
115141870 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115141870 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
one03032
]
115141870 (atm)
03036 Chromosome and associated proteins [BR:
one03036
]
115141870 (atm)
03400 DNA repair and recombination proteins [BR:
one03400
]
115141870 (atm)
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
115141870 (atm)
Protein kinases [BR:
one01001
]
Serine/threonine kinases: Other
PIKK family [OT]
115141870 (atm)
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115141870 (atm)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
115141870 (atm)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
Check point factors
Other check point factors
115141870 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT
TTI1
DUF3349
Motif
Other DBs
NCBI-GeneID:
115141870
NCBI-ProteinID:
XP_029537047
EnsemblRapid:
ENSONEG00000010069
LinkDB
All DBs
Position
LG14:42515162..42559547
Genome browser
AA seq
3089 aa
AA seq
DB search
MSLVLHELLVCCRGLENDKATERKKEADRFRQLIRSPDTVKELDHISGTRAAKSSKQLTW
NAVFRFLQKYLQKETELLQSGKANVSATTQANRQKKMQEISSLVKYFIRCANKRGPRLNC
GELLNHVMEVLRSSFSCLAYGEDYSSILLKNILSVRKYWCDITQQQWHNLLDLYCGLFTG
SSKAINRVLVSRIIHTVVQGCCLQTEGFSHTLFSFFSRALLNARQERHLAVVEHLVSALN
VFLRSAAMNCRMRVCRLGEELLPSVLYVWTQMRPSTTLKEEMVEFFNLQLCVHHPKGSKT
QDTGAYAEDWVKWQSLLYNLYDALVSEISQIGSRGKYATGSRHIAVKENLMELTAEICHQ
LFSEDCNFQMLEVTQAHLRATQRGSPHGTPSKRRRIDLGWEVLRDHLQPHHSDFDVIPWL
QITSVLTSKYPSMVPGQELVPLLSVLCQLLGEQRRGDRGPYVLRCLREVARCQATLTERA
QSYRAELGRLWGRVWALALRGVSSPQTEALSLALLSTILQGAFIPIDRELWKLFSGSACK
PSDAAALCLAQALLKCPVLKSLGTGWDHAGAVEGVGPPSLKENIMSWLLMNEQSEEAEES
SRPHPIICRDFPHNLIPRILVPLTLKDTRAGIMFLLGAKGLESAVMQEQAQVEVKGSLSE
IESMYLQFSFDEMPSNPMAKVMVSSAGTQLTVVPSLKHKLEQGLLSVADHLLNCYSPDSQ
TTPPECLVRCSSLLTGVLAGYVSTGLLTEEEACHSQLFLKAKALVQDFSEYISNVKVKMA
EDGTMTTLRSVMRLCTQCVNRGVKDSMSSVSCNLFMKIFPARLLTELAEICKLLLNSSCR
RGSVGIEEEITDEDWDMTRTQADQQEDIDLFDDGDGPQTSTSKGTHRQNVDPNDTQCGFD
AKSLLAEEHLAQQDLAILASLEFLSLCVSAEFIHGLSFKPVEVRRRLLLLLEQIDCTKPL
HLNMYLVLLKKLPAEDTSLAAEEFDSLLRPLADLCSLYRQDQEVCAAVLLGLLPSIRSLG
RTQDQHNDMRHVQGALIQVVSGFCILGRTGKCTAIVKVALIHCLLALLEADPCCKWAVLT
LREEELPVSVILPSHLSDSHHHVRMLAAMTVERLFLEMTPDSLEKRKMLPLKCQQTAFEN
VYLKAQEGMRLQKNSSPEDLSDETFNRKATLLKSLSVVLCCSPVCEKQSLFALFQSYKEN
NIEEPLIKKVLGSVSRALGYRSVEAFVSSHLDYLVAEWLGQHGYTLESFPYTLLNHATLK
DFYSSSYQVLIPHLVFLDDFKQVKSISTLLGKDWKKLLANCFPKIMVNILPYFAMSGQDA
QVARQREKAHKVYDLLKDSNCLGKPQIDSLIHSNLSDIVVELLMTLYEGAATEEGGRGDL
RRFIGELDPAPNPPYFSSYVIKATLDYLSSCHSANLKSLVAILSKTPISIQRILLAVCQK
AAETINAYERHRILMMYHLFVSLLLKEVKDGLGGAWAFVLRDIIYTLIHHINSRPAQLDE
VSSRSFSLCCDLLTSVCRTAVQFCDDAVESHLQVIVGTLTAQVTTQLAISQQVLSLLKFL
VVESQDKLKSAIQKLEPFPDRPEFRELRAVQHTLKYSTGKFTLRQEIAHFLSVASCDSLP
LTRLEGLKDLRRQLHNNKSQIRPLLRECLADPAESVLVLLVLNLLQLCKLAANHPGGRDI
LEAAGSCLGELGPVDFSTIALLHGKDQLNARAVSLFPSVEPQWLYITLNCINNALTHHCI
EVRQAAVQSLKDILATQAGADFWEIHKDNRDPMLAYLNPFRSTKKKVVGMSEEVSLVARE
RLESQDLWVPEAGGHKAWLKMLCMVLLDSGGVRSEALLLSRPLCLVKTDFCQRVLPLIIH
DILLGDSDGSWRKLLSTHIQDFFTSCFSRARASSRSTTPLPSDSAGESDISNQGPLDKAS
LRTMLSVINYLRQQQRPLGSDSNLCGTVCHSNFWLELNYLEVARAAQSCSAHFTALLYSE
IYVDKIKTNMEENRRNPARVSRRITFDESSQNFTISSLTEESVKDTGISLQDLLIEVYRS
IGEPDSLYGCEGGKMTSALTRIRTYEHEAMWGKALTSYDLHSNLPDGTRQVGIVEGLQNI
GLSSILATYLRGLESEGVEWGAELRELRFQAAWRNMQWDCDLSERNEKLNPGFNESVFCS
LQALRDKEFSTFDQTLKYARGNEVEELCKGSLEAVSSLYPALRNLQRISELESIRQLFSK
PLTDVGLAEVCSHWQQHSQLLVDSDFTLVEPILALRSVAQETLISQERDPEKNKYLSTVL
TSHLMELCQLARAAGNTQLAERAVFQMKQHGGGGRRGSTASSWQLEEAQVFWAKGEQGLA
LGLLRQMIHTLEEQVNVNPALVPVFTECLRLCGNWLAETCLESPGVILEKYLERAVVVIE
GHAIGSDTKLQSQRTQAFLSLARFSDAQYQGIDNYMKSSEFENKQALLEKAKEEVDLMRE
RKVSTNRYTVKVQRELELDERALSNLQADRRRFLCKAVENYIHCLEQGEEHDTWVFRLAS
LWLENADVKTVNDMMKGGVNRIPSYKFLPLMYQLAARMGTKMSATVAEDVGFYGVLNELI
CLSCLEHPHHTLFIILALVNANKDESFSRSRLSKSTPRHSSQLDLERSEVAQGIMKKIRK
KRAQMIRGIEVLCDAYITLAYMDASRHKTEKKAILIPSDQPIMQIKNLDDVIIPTMEIKV
DPSGKYDNLVTIKSFKPHFHLAGGVNLPKIIDCVGSDGKIRRQLVKGQDDLRQDAVMQQV
FHMCSMLLQRNTETRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGDFLIDPQKGAHTRF
CPQDWTSITCRKKMMESQRLGSGGKTQAFSEVCQNFRPVFRYFCMERFLDPAVWLEKRLA
YTRSVATSSIVGYIVGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLS
RDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLKAFYLQ
QQHDEQAELQSTLNSTLGGDILEAHRKSSSDSQSFNKVAERVLLRLQEKLKGVEDGRVLS
VGGQVNLLIQQAMDPNNLSRLFPGWQAWV
NT seq
9270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggtccttcacgagctgcttgtctgctgcagaggtttagagaatgacaaagca
acggagagaaagaaagaggctgatcgcttcagacagctcatccggtctcctgacacagtg
aaggagctggatcacatttctggaaccagagctgctaaaagttccaagcagctcacctgg
aatgcagtcttcaggtttctgcagaagtatctgcagaaagagactgagctgctccagtca
gggaaagccaacgtgtcagccaccacacaggccaaccgtcagaagaagatgcaggagatc
agcagcctggtcaaatacttcatccgctgtgccaacaagagagggcctcggctgaattgt
ggcgagctcctgaatcatgtgatggaggtgctgcggagctcattcagctgcttggcctat
ggggaggactacagcagcatcctgctcaagaacatcctgtctgtccgcaagtactggtgt
gacatcacccagcagcagtggcacaatttgctggatctgtattgtggccttttcactggt
tcctccaaggccataaatcgtgtgcttgtgagcaggatcatccacactgtagtccagggc
tgctgtctgcagactgagggcttcagccatacactcttcagcttcttctccagagcactg
ctcaatgccaggcaggagagacacttggcagtggtggagcacttggtctctgctctgaac
gtcttcctgaggtctgctgccatgaactgccgtatgagggtgtgtcggctgggtgaggag
ctcctgccctctgtgctctatgtgtggacacagatgaggcccagcaccactctcaaagag
gagatggtagagttcttcaacctgcagctctgtgtacatcatcccaaaggatcaaagaca
caagacacaggagcctacgctgaggactgggtcaaatggcagagtctactctataacctg
tatgatgccctggtgagtgagatcagccagattgggagccgggggaaatatgccacaggg
tcgcgccacatcgctgtgaaggagaaccttatggagctgactgcagaaatctgccatcag
ctctttagcgaggattgtaacttccagatgctggaggtgactcaggcccacctcagagcc
acccagagaggcagtccacacggcacgcccagcaagcgtagacgcattgacttgggctgg
gaggttctccgagaccacctgcagccacaccatagtgactttgacgtcataccatggtta
cagatcacatcagtgttgacctctaagtacccctccatggtgcctggccaggagctggtt
cctctgctatccgtcctttgccagctgctgggggagcagcggcggggtgacagggggccc
tacgtgctgcgctgcctgagggaggtggctcgctgccaggccacactcacagagagggcc
caatcctacagggctgaactgggcaggctgtggggccgtgtctgggccctggctctacgg
ggggtcagctccccccagactgaggccctcagtctggccctgctgtccaccatcctccag
ggagccttcattcccattgacagagagctttggaagctcttctctggctcggcctgcaag
ccctctgatgctgctgctctgtgtttggcccaggccctcctcaagtgtcctgttcttaag
agcctgggcactgggtgggaccatgcaggggccgtggagggggtcgggccacccagcctc
aaggagaacatcatgagctggctgctgatgaatgaacagagtgaagaagcagaggagagc
tcaagaccacaccccatcatctgcagggattttcctcataacctcatccccagaatcctt
gtgcctttgaccctcaaagacacccgagctggcattatgtttctccttggagcaaaggga
cttgagagtgctgtgatgcaagagcaagcacaagtggaagttaaaggttccctgagtgag
attgagagcatgtacctgcagttcagctttgacgagatgccctctaaccccatggcgaaa
gtgatggtgtcctcagccggcacccagctcactgttgtccccagccttaaacacaagctg
gagcagggcctcttgtctgtggctgaccacctactcaactgctactccccagattctcag
accacaccaccagaatgcctggttcgttgttcaagtctccttactggcgttttagcagga
tatgtctctactggtctcctgactgaggaagaagcctgccattcccaactcttcctaaag
gccaaggcactggtccaggattttagtgagtacatatctaatgtgaaggtgaagatggca
gaggatgggacaatgaccacactcaggtctgtcatgcggctgtgcacacagtgtgtcaac
agaggggttaaggacagtatgagctctgtctcttgcaacttgttcatgaagattttccct
gcgagacttttgactgaactggcagaaatatgcaaactgttgctgaacagctcctgtagg
agaggtagtgtggggattgaggaggagatcacagatgaggactgggacatgacgaggaca
caggctgaccagcaggaggatattgacctgtttgatgatggagacggaccacagaccagc
acatctaaggggactcacagacagaatgtggaccccaatgacacccagtgtggttttgat
gctaaaagcctactggctgaggagcatttggcccagcaggatttagccatcttggccagt
ctagagttcctgtccctgtgtgtatcggctgagtttatccacgggctctctttcaaacca
gtggaggttcgccgcaggttactactgctgctggagcagatagactgcaccaagccacta
cacctcaacatgtacctggtccttctgaagaaactacctgctgaggacacatcgctggca
gctgaagagtttgactcactcctcagacctctggcggatctttgctcattgtaccgccag
gaccaggaggtctgtgctgcagtgctgctgggtctgctaccgtctatccgtagtctgggc
cgtacccaggaccagcacaatgacatgagacacgtccagggagctctgatccaagtggtc
tctggattctgcattttgggcagaacggggaaatgcacagcaattgtaaaggtggcatta
attcactgtctactggctctactggaggctgacccttgctgtaagtgggcggtccttacc
ctgagggaggaggagcttccagtgtccgtcatcctcccgtcccacctgtctgactctcac
catcatgtacgaatgcttgcagccatgacagtggaaaggctgtttttggagatgacaccg
gacagcttggagaagagaaagatgcttcctctgaaatgccagcagacagcctttgagaac
gtctacctgaaagcccaagaagggatgaggctccagaagaacagctctcctgaagacctg
agtgacgagacctttaaccgcaaggccacgctgctgaagagtctgtcggtggtactgtgc
tgcagccccgtctgtgagaaacagtccctctttgccctcttccagtcctacaaggagaac
aacatagaggagccactcatcaaaaaggtcctgggcagtgtgtccagagctctgggctac
aggagtgtggaggcgtttgtcagctctcacctggattacctggtggcagagtggctgggc
cagcatggctacactctggagtccttcccttacactctgctcaaccacgccactctcaag
gacttctacagctcctcctatcaggtccttatcccacacctggtcttcctggatgacttt
aagcaggtgaagtccatcagcaccctcctgggtaaggactggaagaagctgctggccaac
tgcttccctaagatcatggttaacatcctgccctactttgccatgtcgggccaggatgcc
caagtggcccggcagagagagaaggcccacaaggtctatgacctactcaaggacagcaac
tgcctgggcaaaccgcaaatcgacagcctgattcacagtaacctgtcagacattgtggtg
gagctgttgatgaccctgtatgaaggggctgctactgaggaggggggcagaggggacctg
agaaggttcataggggaactggacccagccccaaacccaccctatttcagctcctatgtc
ataaaagccacactggactatctcagctcgtgtcacagtgccaatctcaagtccctggtg
gccattttatccaagactccgatctccatccagaggatcctactggcggtgtgtcagaag
gcagctgagacgatcaatgcctacgagaggcaccgcatcctgatgatgtaccacctgttt
gtcagcctgctgctcaaggaggtcaaggacggcctggggggagcctgggccttcgtcctc
cgagacataatttacacactcatccaccacatcaacagcaggccggcccagttggacgag
gtgtccagccgtagtttctccctgtgttgtgacctactgacctctgtgtgtcgcacggcc
gtgcaattctgtgacgatgctgtggagagccacctacaggttatcgttggtactctcact
gcccaggtgacaacccaacttgctatctcacagcaggtgctcagtctgttgaagttcctg
gttgtagagagtcaggacaagctgaagagtgccatccagaagttagagcccttcccagac
cgacctgagttcagagagctaagggccgtgcagcacacactgaagtacagcacagggaaa
ttcactctcagacaggagatagcccacttcctgtctgtggcttcctgtgactccctgcct
ctgaccagactggaggggctgaaggacctgaggagacagctccacaacaacaagagccag
atcagaccactgctgagagagtgcctcgcggaccctgcagagagtgtgttggtgctgctg
gtccttaacctactacagctctgtaagctagcagccaatcaccctggaggaagagacatc
ttagaggctgcagggagctgtctgggagagctggggcctgtggatttctccaccatcgct
ctgctccatgggaaggaccagctcaatgccagagctgtatcactcttcccttcagtggaa
ccacagtggctctacatcaccctgaactgcatcaacaacgccctcacacaccactgtatt
gaggtgaggcaagctgctgtccagagtctgaaggacatcttggccactcaggctggagct
gacttctgggagatccataaagacaaccgtgaccccatgctggcttacctcaaccctttt
aggtctaccaagaagaaggtggtcgggatgagtgaggaggtgagcttggtggctagggag
cggctggagagccaggacctgtgggtgcctgaggctggcggccataaggcctggttgaag
atgctctgcatggttctgctggacagtggaggggtcaggagtgaagctctgctgctttcc
cggcccctgtgtctggtgaaaacagacttctgccagagggtgctgccgctcatcatccat
gacatcctgctgggggactctgacggctcctggaggaagctcctctccacacacatccag
gactttttcaccagctgtttcagtcgtgcccgggcctctagccgctccaccactcctctc
ccctcagactctgcaggagagtcggacatttccaaccagggtccgttggataaggcctct
ctgcgcaccatgctctctgtcattaactatctgaggcagcaacaaagacctctaggatct
gatagtaacttgtgtggtacggtgtgccactctaacttctggttggagctgaactacctg
gaggtggccagggcagcccagtcctgctcagcccacttcacagccctgctctactctgag
atctacgtcgacaagatcaagactaacatggaggagaaccgcagaaatccggccagagtg
tcgcgcagaatcacatttgatgagagcagtcagaacttcaccatctccagtctgacagag
gagagtgtgaaagacactggtatcagtctacaggacctactgattgaggtgtatcgtagt
attggggagccagacagtctgtatgggtgtgaaggtgggaagatgaccagcgctctcacc
aggattcggacctatgagcatgaggcgatgtggggaaaggctctgacctcctacgacctc
cactccaatcttcctgatggcacacggcaagtaggcattgtggagggtctgcagaacatt
ggtctgagcagtatcctggccacctacctgcggggtctggagagtgagggggtggagtgg
ggggcggagctaagggagctaaggtttcaggccgcctggaggaacatgcagtgggactgt
gacctatcagagaggaatgagaaattgaaccctggcttcaacgagtcagtgttctgctcc
ttgcaggctttgagagacaaagagttttccacattcgaccaaactcttaaatatgccagg
ggcaatgaggtggaggaactgtgcaaaggcagtctggaggcagtgtcctctctctaccct
gctctacggaacctccagaggatcagtgagctggagagcatccgacaacttttctccaag
cccctgaccgacgtaggcctggccgaggtgtgttcccattggcagcagcactcccagctg
ctggtggacagtgactttacgctggtggagcccatcctggccctgcgctccgtggcccag
gagaccctaatctcccaggagagagaccctgaaaagaacaagtacctcagcactgtcctc
acctcccacctcatggagctctgccaactggcccgcgccgcaggaaacacacagctggca
gagcgggcggttttccagatgaagcagcatggcggaggagggaggcggggctccacagcg
tcgtcatggcagctggaggaggcccaggtgttttgggcgaagggagagcagggtcttgct
ctggggctactgagacagatgatccacactctggaggagcaggttaacgttaaccctgcc
ctggtgccggtgttcacggagtgcctgaggctgtgtgggaactggctggcagagacgtgc
ctggagagccctggggtcatcctggagaagtacctggagagggcagtggttgtgatcgag
ggccatgcgataggttcagacaccaagctgcagagccagaggacgcaggccttcctgtcc
ctggccaggttctcagatgcccagtaccagggcattgataactacatgaagtcatctgag
tttgagaacaaacaggctctgctggagaaggccaaggaggaggtggacttgatgagggag
cgcaaggtcagcaccaacaggtacacagtgaaggtgcagagggagttggagctggatgag
agggctctgtccaacctgcaggctgacagaaggaggttcctgtgtaaggctgtggagaac
tacatccattgtcttgagcagggcgaggagcacgacacctgggtgttccgcctggcctca
ctgtggctggagaacgctgacgtcaagacagtcaatgacatgatgaagggaggtgtgaac
aggatcccgtcctataagtttctgcctctcatgtaccagttggctgcccgcatggggacc
aaaatgtctgctacagtggcagaggatgtgggcttctatggtgttctcaatgagctgatc
tgcctgtcgtgtctggagcaccctcaccacaccctcttcatcatcctggctctggtcaac
gctaacaaggacgagagcttctcccgcagccgcctgtccaagagcaccccgcgccattcc
tcccaactggacctggagcggtctgaggtggcccaggggataatgaagaagatcaggaag
aagagagcccagatgatcagaggcatagaggtcctctgtgatgcctacatcactctggcc
tacatggacgccagtcgacacaagacagagaaaaaagccatcctcatcccctctgaccag
cccatcatgcagataaagaacctagatgatgtcatcattcctacaatggagatcaaggtg
gacccctcgggtaaatatgacaacctggtgaccatcaagtccttcaagcctcactttcac
ctggccggaggggtcaacctgcccaagatcattgactgtgtgggatcagacgggaagatc
agacgacaactggtcaagggccaggatgacctgcggcaggatgctgtaatgcagcaggtg
tttcacatgtgttctatgctgctgcagcgcaacactgagacacgcaagaggaaacttaac
atcagacgctacaaggtggtgcccttctcccagcgtagtggggttctagagtggtgctcg
gggaccgtccctataggggatttcctcatagacccccaaaagggcgctcacacacgcttc
tgcccccaagactggaccagcataacctgccggaaaaagatgatggagtctcagaggctt
ggttccggtgggaagacccaggctttcagtgaggtgtgtcagaacttccggcctgtcttc
cggtacttctgcatggagcgattcctggacccggcagtgtggctggaaaaacggctggcc
tacactcgcagtgtggccacttcctccatcgtgggctacattgttggactgggggatagg
cacattcagaacatccttatagacgaacagacagctgaactggtgcatattgatttgggt
gtagcgtttgaacagggcaagattctcccaactcctgagactgttcccttcaggctatcc
agagatattgtggatgggatgggcataacgggggtggagggcgttttcagaagatgctgt
gagaagaccatggaggtcatgaggagttctcaagaggccttgctgactattgtagaggta
ctgctgtacgaccctctgtttgactggaccatgaaccctctcaaggccttctacctgcag
cagcagcatgatgagcaggctgagctccagtccacgctcaactctacactggggggagac
atcttggaggcccaccgcaagtccagcagtgatagccagagcttcaacaaggtggcggag
cgcgtgctgctgcggctgcaggagaagctgaagggggtggaggatggcagggtgctcagt
gtaggagggcaggtcaacctcctcatccagcaggccatggaccctaacaatctcagccgc
ctcttccccggctggcaggcctgggtctag
DBGET
integrated database retrieval system
