Oncorhynchus nerka (sockeye salmon): 115141979
Help
Entry
115141979 CDS
T07952
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like isoform X1
KO
K06751
MHC class I antigen
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
one04145
Phagosome
one04218
Cellular senescence
one04514
Cell adhesion molecules
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115141979
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115141979
04145 Phagosome
115141979
09143 Cell growth and death
04218 Cellular senescence
115141979
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115141979
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115141979
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
115141979
Exosome [BR:
one04147
]
Exosomal proteins
Proteins found in most exosomes
115141979
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
Antigens
115141979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
DUF4224
Ig_3
MHC_I_3
Orf78
Motif
Other DBs
NCBI-GeneID:
115141979
NCBI-ProteinID:
XP_029537278
EnsemblRapid:
ENSONEG00000027930
LinkDB
All DBs
Position
LG14:49264637..49267655
Genome browser
AA seq
328 aa
AA seq
DB search
MITTILISFMQFSIVAPHSLHRHCIATQGTLYPKNIQLVMIDDVIVYYYNSSAEQEAVVP
EWLNHPEGIEFWQEVHRNLKFNRYVMDTAVRVTSEHYNHSHDHFYQAHGRCGWKSDGTTE
AFMSHAYDGKDFVSFDVSTRTWTAAVSHAVFYKRKRETDVEDLVRLVIHYESGCIRWLEK
LLEFSVTVREPKVPAVSLFERPPHGNSEVEVTCHVTGFYPRAVQVEWLGAEGLPMVDRVS
SGEVLPNGDGSYQLRKSLTVPQEAQDTQSYSCLVLHSSIAGNITVTWAPKKNLANVLMAI
VIIVSVVLILTVLIKYLVWRRAVGKSQS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgataaccacaattttaatttcattcatgcagttttccatcgtagcccctcattctctt
catcgccattgcatcgcaacccaagggaccttgtatccgaaaaatatccagttggtaatg
atagatgatgtcattgtctattactacaacagcagtgctgaacaagaggccgtagtgcca
gaatggttgaaccaccctgagggaattgaattttggcaggaggttcatcgaaatctgaaa
tttaatcgatatgtaatggatactgccgtgagagtaacaagtgaacattacaatcattca
catgatcacttttaccaagctcacggacgctgtggatggaagtcggacggaaccacagag
gcctttatgagccatgcatatgatggcaaggactttgtcagcttcgatgtatcgaccaga
acatggacagctgcagtttcccatgctgttttttacaaaagaaaaagggaaacagatgta
gaagatcttgttaggctggtcattcattacgaatctggatgcatccggtggctggagaaa
ctgttagagtttagcgttacagttcgagaacccaaagtccctgcggtgagtctgtttgag
agaccgcctcatggcaactccgaggtggaggtcacatgtcatgtgacagggttctaccct
cgggcggtgcaggtggagtggctgggggcagaggggcttcccatggtagacagggtgagc
agtggggaggtgctgcccaacggagacggttcataccagctgaggaagagcctgactgtc
ccacaggaagcccaggacacccagagctacagctgcctggtgctccacagcagtatagct
gggaacatcacagtaacctgggcgccaaagaagaacctggccaatgtgctcatggctata
gtcatcattgtatctgtagtcttgatactcactgtcctaatcaagtatttagtatggagg
agagcagtaggtaagagtcaatcttaa
DBGET
integrated database retrieval system
