Oncorhynchus nerka (sockeye salmon): 115142380
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Entry
115142380 CDS
T07952
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115142380
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115142380
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_8
Motif
Other DBs
NCBI-GeneID:
115142380
NCBI-ProteinID:
XP_029537630
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All DBs
Position
LG15:197494..233945
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AA seq
477 aa
AA seq
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MLMSTDLTSIMLPVSRAIMDRDRELQDTMAGVHPNSTGASGAAVRGMKRGDPASDAQTST
ALVESAGAECKRPRIDASGVVAEVGQNNDPLTLGYHGYPTHSQGSQDSAGGQECLVPPSF
STFPPPPPPPPQNGLALEYGASLYSAGAIQGSVEVGQAGLNIPTSVPNSLTTHQSDVSSQ
IDTQLVCTGGGGGGGSVGDDSEKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFETSADAEKARAALHGTLVEGRKVEVNNATARVMTNKKMVTPYSNGGE
GLAALPYGLLNANSPTAGWKLSPMVGAMYSPELYTDFSGLSLSVPGFPYPAAAAQAATVA
ATFRGAHLRGRGRPVYGAVRAALPQQAIPTYPGVMYQEGFYGAADLYGGYAAYRYAQPTA
VAGPAGAAAAAAAAYSDGYGRVYTTDPYHAALNPAAAYGVGAMATLYRGGYSRFAPY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacttaacatcaatcatgctgcctgtatctcgggctatcatggac
cgggatcgagagctccaggacacaatggccggggtgcatcccaactcgaccggggcttct
ggcgcagctgtccggggaatgaagcgaggagacccagcatctgacgcgcagacgtcgaca
gctcttgtggaatcggccggggcagagtgcaagcgtccccggattgacgcatctggagta
gtcgcagaggtcggccagaataatgaccccctgacccttggttaccatggatacccaacc
cacagtcagggctctcaggattcagcaggtggtcaagagtgtctcgtccccccatccttc
tccaccttcccccctcctccccctccgcccccccagaacggcttggccctggagtacggg
gccagtctgtactccgcaggggccatccaggggtcggtggaggtcggacaggcaggcctt
aacatcccgacaagtgtcccaaacagcttaaccacccaccagtcagatgtgtcgtcacag
attgatacccagttggtgtgtacaggaggaggtggtggcggggggtccgtaggggacgac
tcagagaaggggacccccaaacgcctccacgtctccaacattcccttccgcttcagagac
cctgacctccggcagatgtttgggcaatttggaaagatcctcgacgtagagatcatattc
aacgagagaggatcgaagggttttggctttgtgacgtttgagacgagtgcagacgccgag
aaggccagagccgctctccacggaactctggtggaaggacgcaaggttgaggtcaacaac
gccacagccagggtgatgaccaataagaaaatggtcaccccatattctaatggaggagag
gggctcgccgctctaccttatgggctactaaatgccaactcccctacagctgggtggaag
ttgagtccaatggttggagccatgtacagtccagagctctatacagatttctctggcctg
tctctctcagtccctggcttcccgtaccctgcggcggctgcacaggctgccacagtggcg
gcgacctttaggggcgcccacctccggggtcgtggccggccggtctacggtgctgtcagg
gcagccctaccccagcaagctatacctacatacccaggtgtgatgtatcaggaagggttt
tacggtgcagcagacctctatggtggctatgctgcgtatcgctacgctcagccgactgcg
gtagctggtcctgcaggagcagcggctgccgcagcagctgcctacagtgatggctacgga
cgggtgtacacgacagacccttaccacgctgcactgaaccctgctgcagcctacggtgta
ggagctatggccacactgtacaggggaggctacagtagatttgcgccctactaa
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