Oncorhynchus nerka (sockeye salmon): 115143108
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Entry
115143108 CDS
T07952
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1-like isoform X1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115143108
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115143108
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115143108
03036 Chromosome and associated proteins [BR:
one03036
]
115143108
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115143108
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
115143108
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
115143108
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115143108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
115143108
NCBI-ProteinID:
XP_029539061
EnsemblRapid:
ENSONEG00000000424
LinkDB
All DBs
Position
LG2:complement(53629944..53650412)
Genome browser
AA seq
754 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCPSPVYGFIFLFKWIEERRSRR
KVSTLVDETSVIDDDIVNDMFFAHQLIPNSCATHALLSVLLNCSGVELGTTLSRMKTFTK
GFGPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRL
FELDGLKAYPIDHGPWGEEEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVK
YESKLEILKRNRQMVLEGLQQLIRVTQPELVQDRKKPDSSPSDDTPPTIKKEEADPQPVT
SQGAEQTPPTNTAAQSQLVPSSSGKGNAMGKPAAPLGGAGTSQPVTSPIVPRLPAFLDNH
NYAKSPMQEDEDLATGVGRPRVPGAPQPPYSDDDDYEDEEEEELGTPTRFRRKGVLRSRT
GRVGGGSGVETKLALGVLAEKLKKEVQRKDSLATPLSVRTEGRTGGIVITAASQPSPTPS
NESTDTASEIGSAFNSPLRSPARSQAATRPSSPVASHLSRVLFGEDEGLLRLDARQNRAV
RELGPSVSTALLHLQEDGVIYTVPPPGEEGRVCAWVADTALEEKKAGAPEKVKEQGSNPA
VEGDGVKEEGKEGPSVEVKEEEIRDATEVKPSMEKVISTETVGSNKPSGEKYSPKELLAL
LKCVEADIANYEVFLKEEVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQN
ISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagggtggctggagctcgagagtgacccggggcttttcacgctcttggtggag
gattttggtgtgaagggggtccaggtagaggagatatacgacctacaaagcaagtgtcca
agccctgtgtatggcttcatcttcctgttcaagtggatcgaggagcgaaggtctaggagg
aaagtctccactttggtggatgagacctctgtcattgatgatgacattgttaatgacatg
ttctttgcccaccagctgatcccaaactcctgcgccacccatgcacttctgagtgtgctc
ctgaactgtagtggggttgagttgggcactaccctcagtcgcatgaagactttcactaaa
ggcttcggcccagagagtaaaggctacgccattggaaatgccccagagctggctaaagca
cacaacagccatgccagaccggagcccaggcacctgccggagaagcagaacgggattagc
gccgtgcggaccatggaagcattccactttgtcagctacgtgcccatcaaagaccgcttg
tttgagctagacggcctcaaggcgtaccccattgaccacgggccatggggagaggaggag
gagtggacggataaggcacggcgggtcattatggagaggattggcttggccacggctgga
gagccctaccatgatatccgcttcaacctgatggcagtggttccggaccgcagggtgaag
tatgagtcaaaactggagatcctgaagaggaacagacagatggtactggagggtctacag
cagctgatccgggtcacccagccagagcttgtacaggacaggaagaagccagactcctcc
ccctcagatgacacaccccctactatcaaaaaagaagaggcggaccctcaacctgttaca
tcacagggggctgagcagactcctcccacaaacacagcagcccagtcccaattggtcccg
agctcctcaggcaaggggaacgccatggggaagccagctgccccattggggggagcgggg
acctcccagcctgtcaccagccccatcgtccctcgcctaccagccttcttggacaaccac
aactacgccaagtcccccatgcaggaggatgaggaccttgcgacaggggtgggtcgtccc
cgggtgcccggtgcgccccagcccccttactctgatgacgatgactatgaggatgaagag
gaggaagagcttggcacaccaaccaggttcaggcgtaaaggggtgctgcgttcccgtaca
ggccgtgtcgggggaggcagcggcgtagagaccaagctggcactcggcgtcctggccgag
aaactcaagaaggaagtccagaggaaggactctctggccacgcccctctccgtccgtacc
gagggccgcactgggggcatcgtgatcacagccgcctcccagccctcgcccacacccagc
aacgagagcaccgacaccgcctcggagatcggcagcgccttcaactcaccactgcgctcc
ccggcccgctcccaggcggccacgcggccctccagccctgtggcatcccacctgtcccgg
gtgttgtttggggaggatgagggtctgctgaggctggatgccagacagaaccgggccgtc
agagagctggggccctccgtcagcaccgccctgctgcacctacaggaggacggggttata
tacactgtaccaccacccggtgaggaaggacgggtgtgtgcgtgggtggctgatacagct
cttgaagagaagaaggcaggcgctccagagaaggtaaaagagcaaggtagcaatccagca
gtagagggtgacggagtgaaggaggaggggaaggagggaccatcggtggaggtgaaagag
gaagagatcagagatgcaacagaggtcaaacccagcatggaaaaggtcatctccacagaa
actgttggaagcaacaaaccatctggggaaaaatactctcctaaagagctgcttgctctg
ctcaagtgtgtggaggctgacatcgccaactatgaagtgtttctaaaggaggaggtggag
aagaggaaaaaatacaagattgatgaccagaggaggacccataattatgacgagttcatc
tgcaccttcatatccatgctggcacaagaaggcatgttggccagtctggttgagcagaat
atctctgtgcgtcgtcgccagggagtgagcatcggacgtttacacaaacagaggaaacca
gaccgcaggaaacgctcgcgaccctacaaggccaagcgccagtga
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