Oncorhynchus nerka (sockeye salmon): 115144730
Help
Entry
115144730 CDS
T07952
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115144730
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115144730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
EMC3_TMCO1
zf-RING_5
zf-RING_10
EVI2A
Wtap
KorB
Exonuc_VII_L
Jnk-SapK_ap_N
Motif
Other DBs
NCBI-GeneID:
115144730
NCBI-ProteinID:
XP_029541632
LinkDB
All DBs
Position
LG17:1857446..1861220
Genome browser
AA seq
387 aa
AA seq
DB search
MAEAPFEDMDLMSCSICLDILKDPVTTACGHSYCMGCIIEHWDQDDLKGFYSCPQCRETF
IPRPVLNRSTVLAEVVEKLKNRGLQAAPPPAHCYAGPLDVGCDSCIGRKLKAFKSCLMCL
ASFCETHLKLHNDLNRGKKHKLIDATGQLQEKICPHHDKLLEVYCRTDQQCICLLCVMDE
HKGHDTVSAAAERTEKQKQMGENSLKSMLRIQEREKEMQELRQAVDSLKRSAQEELSDSE
RTLTELILFIERRRSEVNELIRAQEEAEVSRAKRRLQQLEQEVAELKRRDSELKQLSHTE
DNIHFLQSFQSLCVTPGSEAIPSISITFEQAKKYVSDLKEICKVEMDRISRKDVFKSNNM
IIIFVFIIVLFLMFLGRGGGGRGMNQL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcaccttttgaagatatggatttgatgagctgttcaatctgtctggatata
ctgaaggatccggtgactactgcctgtggacacagttactgtatgggctgtattatagaa
cactgggatcaggatgatctgaaaggtttctacagctgtccacagtgcagagagaccttt
atcccacgacctgttctgaacaggagcactgtgctggctgaagtagtggagaaactgaag
aacagaggactccaggctgctccccctcctgctcactgttatgctggacctttagatgtg
gggtgtgacagctgcattgggagaaaactcaaagctttcaagtcttgtctgatgtgtctg
gcctctttctgtgagactcacctcaaacttcacaatgacctcaaccgaggaaaaaaacac
aagttgattgatgccactggacaactccaggagaagatttgccctcatcatgacaaactg
ctggaggtttactgtcgtacagatcagcagtgtatatgtctgctgtgtgtgatggatgaa
cataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagaagcagatg
ggggaaaacagtctgaaatccatgctgagaatccaggagagagagaaggagatgcaggag
ctgagacaggctgtggactctctgaagcgctctgcacaagaggaattgtctgacagtgag
aggaccttaactgagctgatcctcttcattgagagaaggcgctctgaggtgaacgagctg
atcagagcccaggaggaggctgaagtgagtcgagctaaaaggcgactgcagcaactggaa
caggaagtggctgagttgaagaggagagattctgaactaaagcagctttcacacacagag
gataacatccatttcctccagagtttccagtctctctgtgttactcctggatctgaggcc
atacccagcatcagtatcacatttgaacaagcaaagaaatatgtctctgacctgaaagag
atctgcaaggtggaaatggacaggatatccaggaaagatgtgtttaaatcaaataatatg
attataatatttgtttttattattgtcttgtttctaatgtttttggggagaggggggggg
gggcgggggatgaatcagctttaa
DBGET
integrated database retrieval system
