Oncorhynchus nerka (sockeye salmon): 115145965
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Entry
115145965 CDS
T07952
Symbol
catsperb
Name
(RefSeq) cation channel sperm-associated protein subunit beta isoform X1
KO
K16893
cation channel sperm-associated protein subunit beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115145965 (catsperb)
04040 Ion channels [BR:
one04040
]
115145965 (catsperb)
Cilium and associated proteins [BR:
one03037
]
Motile cilia and associated proteins
Sperm associated proteins
115145965 (catsperb)
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
115145965 (catsperb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CATSPERB
CATSPERB_2nd
CATSPERB_1st
Motif
Other DBs
NCBI-GeneID:
115145965
NCBI-ProteinID:
XP_029543544
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Position
LG18:17827771..17872448
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AA seq
1174 aa
AA seq
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MASSVGRQTMEINRPSIKVTQVIFIITILLVRVQFGTTISDPDEPDDTDEPNDTDDTDEP
DDPEQQKLFQCVSGNMDSKRVRLYLGLDNLVVDCMLRKKPGGSARQYQNQLKLYTSSGLL
PTMAIYNSTNSATFSFKLIMNASTWRVNVPRYNITINTVAAPVDEWYVEFSMFHGFSMFS
SKGSILDTLKGTLLDVAREPILQWTIGEELSSRIIEPHLHRVLQLQVSQSPCAGDVAVLA
PVFAPGGHTGVILSVTRSAFTAQGRWFNATRSLCSLINEVCVSGCAGISIVDLKLTNCHL
FLLTNRGLFISQDLLSPVTGTLNFTLLFLPALAQMDYSATTLWFSSQCVTDRIYFSDDTL
SLISNEGEGENLHSRCVYSKYPFTRWFLCQASAVDIAKNPKHRYLSFLHDRHQHTGLLLS
HTEQEGAMVSVFGVKAEELFQRHTKFPPVILDFQPRGIFLLDNHVILYGSEVWTSSDRGS
TFTWVFSLENQIVIDALSCTVIGVVVFFTDHGNLYIMKSGLARYAWLNETLDVASTLLCG
HMGILIAVQLDKDKPSGFSYRNIEIDHLIEKHEMSFDKALALQYTTDHTVLLHENVVIND
HANGHNRQGRNNPLTVAPASQFSPDHVGKVIYFSDGGMVVITEVFRTHYLKGFSGVVVGE
ILEPIKGASLNAEPVQLYDLLVKKGEPEGLIVTLQLKDLDPSQGFNLSHVGKAVVAPGFS
SYLITGLLPSGSALAKPTMPALVLPLTSHRSGEWLLFHSAGRGSWGMKEGPCRHAMQSLN
GVRNNALMRINVREKLNFTFKAFMSDYSLSMVYHKKFMRVVLTNPLAIRVTARHSWDDTN
NHMLTLTAFSHLCKKATTTVTVYIPEASLLCRSSSFTFTLQNSCPEGLQIVYVSQQPISD
HEWIHADPEDHMDNKRLFNLPVNYRPPSQLGVLIPTSDNIYNADPSHPRPREHYPISKNS
GRYKQCAGKRSAEECGCTDILKVSPLAINSDCRQRVLRLTFPVTDFNITLFLRRTNHADH
PLCSPYFVTVTEVNNRTSWKVTGTHATPTMDRMRQYLEDSLKNNLYNPEGLQISLYGSEL
FHFRISVIPGVVLCDLVEEVQIYVDEPPLAFPTQHLVNNMAAIILGGLLLFGFLLIYNGV
AMPTKSSIKTLLKKHKPTISPTRTQNSTTTQGPE
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggctagctctgtagggcgacagactatggagattaatcgaccttcaatcaaggtgacc
caggttatattcatcataaccattttgttagtcagggtgcagtttggaaccaccatatca
gacccagatgaaccagatgacacagatgaaccaaatgacacagatgacacagatgaacca
gatgacccagagcaacagaaactatttcagtgtgtgtcaggaaatatggatagcaaaagg
gttcgactgtacctcggcctggacaatctggtggtggattgcatgctacggaagaaacca
ggcggctcagctagacagtaccagaaccaactgaagctctacacatcatctggtctcctg
cccaccatggccatctataacagcactaactcagccaccttctcctttaaattaattatg
aatgcatccacctggagagtgaacgtccccagatacaacataactatcaacacagtggca
gcacctgtggatgagtggtatgtggaattcagtatgttccatggcttctctatgttcagc
agcaagggatccatcctggacacactgaagggaacactactggacgtggccagagagccc
atcctgcagtggacgataggggaggagttgtcgtctcgtatcattgaaccacatctccac
cgggtcctgcaactacaggtcagccagagtccctgtgccggtgatgtggccgtgttggca
cctgtcttcgctccaggaggacacacaggggtgattctcagtgtcaccagatctgccttc
accgctcaaggacgatggttcaacgccacaagatcactatgtagcttgatcaatgaagtg
tgtgtgtctggctgtgcggggatctccatcgtggacctgaagctgaccaactgtcacctg
ttcctgctgaccaaccgggggctcttcatcagccaggatctcctttcccctgtcacaggc
actctcaatttcaccttgctgttcctccctgcactggctcagatggactactctgccacc
accttgtggttttcctctcaatgtgtgacagatcgcatctatttcagtgatgacacactc
agtttgatttccaatgaaggagaaggtgaaaacctgcattctaggtgtgtgtacagtaag
taccccttcacgaggtggttcctgtgccaggcctccgctgttgacatcgcaaagaacccc
aaacaccgttacctgtccttcctccatgaccgtcaccaacacactggcctactgctctca
cacactgagcaggagggtgcgatggtgtcagtgtttggtgtaaaggcagaggaactcttt
cagcgtcacaccaagttccccccggtgattctagacttccagcccagagggatcttcctg
ttggacaaccatgttatcctgtacggctcagaggtgtggacatcgtcagatagaggctct
accttcacgtgggtgttctctctagagaatcagatcgtgatagacgctctgagctgtact
gttattggcgtggtagtgttcttcactgaccatggaaacctctacatcatgaagtcaggt
cttgccaggtatgcgtggttgaacgagaccctggatgtagccagtactctactgtgtggt
cacatgggcatcctaattgctgttcagctggacaaagacaaacccagtggctttagctac
aggaacatcgagatagaccacctcatagagaaacatgagatgagttttgacaaagccctg
gccctccagtacaccacagaccacacagtcctgctccacgagaacgttgtcatcaatgac
catgctaatggacacaaccgccagggcaggaacaaccctctcaccgtggcacctgccagc
caattctcacctgaccacgtgggcaaggtcatctacttcagtgacggtggcatggtggtg
atcacagaggtgttccggactcactatctgaaggggttctccggggttgtcgtcggggag
atcctcgagccaatcaaaggagccagcttgaatgcggagcctgtgcagttatatgacctg
ttggtgaagaagggggagcccgaggggctcattgttacactgcagctcaaagacctagat
ccgtcccaggggtttaatttgtcccacgtggggaaggctgtggtagcaccaggcttcagc
agttacctcatcacagggctgctgcccagcggcagtgccctagccaaacccaccatgcca
gccctagtgctccccctgaccagccaccggtcaggagagtggctgctcttccactctgca
ggccgggggagctgggggatgaaggaggggccatgtcgtcacgccatgcagtcattgaac
ggtgtgaggaataacgctctgatgaggatcaacgtcagagaaaagctcaactttaccttc
aaggccttcatgtccgactactctttgtccatggtgtaccataagaagttcatgcgtgtg
gttctgaccaaccctctggccatccgagtcacagccagacactcctgggacgacaccaac
aaccacatgctcaccctcaccgccttcagtcacctctgcaagaaggcaaccaccacagtg
acggtatacatcccagaagcctctctgttgtgtaggtcctcctccttcaccttcacactg
cagaactcctgccccgagggactccaaatcgtctatgtctcccaacagccaatcagtgac
cacgaatggatccacgcggatccagaggatcacatggacaacaagaggctcttcaacctg
cctgtgaactaccggcctccctcccaactaggtgttttaatcccgacctcagacaacatc
tataacgctgacccaagtcatccccgccccagagagcactaccccatctccaagaactct
ggtcggtataagcagtgtgcagggaaaaggtccgcagaggaatgtggctgtacagacata
ctgaaagtctctcctctagccatcaactctgactgcagacagagggtgctgaggctaacg
tttcctgtgactgacttcaacatcaccctgttcctgaggagaaccaaccacgctgaccac
ccgctctgctctccttactttgttactgtcacagaggtcaacaaccggaccagctggaag
gtcacagggacccatgccacccccaccatggacaggatgagacaatatcttgaagacagt
ctaaagaacaatctctacaacccagaaggactgcagatcagcctatatggctctgagctt
ttccacttccgtatctctgtcattcctggagttgtgttgtgtgacctggtggaggaggta
cagatctacgtagacgagcctccgctggcgttcccaacccaacacctcgtcaacaacatg
gcagccatcatcctgggaggcctgctgctctttggcttccttctcatatacaacggcgtt
gccatgccaaccaagagcagcatcaaaaccctcctcaagaaacacaagcccaccatctcg
ccaaccagaacccagaactctaccacgacacagggacccgagtag
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