Oreochromis niloticus (Nile tilapia): 100690162
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Entry
100690162 CDS
T06104
Symbol
frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100690162 (frem1)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
100690162
NCBI-ProteinID:
XP_005465343
Ensembl:
ENSONIG00000019862
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All DBs
Position
LG3:222357..247910
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AA seq
2178 aa
AA seq
DB search
MGSPVQLLAWMCLPLLLVVHCASHGSLVKVNKGLKVKRGQSAYLHVEDLQFHIPHQKDSC
KLEVVMNEPITQRVGKLLPQVFDCDYLADEVKYVHNGCPLLKEDTVKLRLYRFTETETYM
EVFSIHVEIMEPECTIIRLGPKSLEVPEFYSLSNAVDGNVVSFHYERRSSLECSIHLNSH
DTHLPTHGQLVTGEPEEAVRRGDEPETFIHLRQQLDNKARAMCKSEDCLKGLKLVRFTTV
SCEDFLVMGLRYQHTDPPSPQVDYIAVRLDLKDTRSGSIYQSEQAWIPVQITGATPNQPP
KPAYMSMFILEVDQFILTPLSTATLDAEDEETPKQLLVFNITTPPQDGFITHLSDHTRPV
SSFTWLDLNDMLVGYQPANFSHNQRRNYEVEFEVHDFYFEKSPTLTVHMSVRTADTNAPR
VSWNMGLSLLEGQSRPITWEQLQIVDNDNLDAVRIITVDGLQHGRLTVRGGKGFMFTVND
IKGGVVCYHHDDSDSTKDFIIFRITDGHHQTRHKFPIKILPKDDTPPFLITNMLLEVPEG
HTALLRGSILQASDMDSSDDYILFNITRPPQSGEVMKIPGPGKTGYPVSHFLQKDLSQST
VYYRHLGHEVSDDWFEVVLSDFHDPPNLSEAQVVMVHVEPVPDKPPKEVPGSSRCLVLKE
TDVVHITRQQLHFADPQSADRELTFTVTTPPFYSRPHRNPDAGRLFLVDSIPKFTKDANA
PMLKVFTQHAVNFMKVAYMPPIMDIGQYPQQIQFVLSVTNHLGKTVTGICFNITVEPVDN
QPPQVVTKPLTVDEGGECRLGPEHVLLSDQDSSEEALRVELQREPQHGALHLSGLLMKPG
QSFTLQDLKSHKVRYSHDSSETTQDNIEFTATDGTSSVIFVLQVMVKPINDEVPVVGAGL
KPGLSCAEGQEVVITTEYIYATDRDSDNSSLSFLIVQQPHHGVVLRKGAAVDRFIQADIT
AGIITYKHSEVEIGLSPRHDTITFVISDGETETLALCCSGGSPVRVSSTAHLRQTLPVYD
LQITVFPVDSQPPTLETPDIFKVNEGGTAPITAAHLKASDMDTVLDELVISLTSPPQFGY
IENVLPTPGFEKSNTGVSIASFSYKDIMEGHVNYVQSRHQRVEPTADHLMLCVTDGKHSS
AHVSFYIIINPTNDEAPEFVAHNITVQEGKMKQLDSSVLHATDLDIPKNVLLFSVATPPR
HGSIITHSRGDSKKRETQHQLPVVAFTMADLINDMDVMYVHDDSESAEDSFTMQLTDGRH
QVLKQVMVKVLRVNDEKPHLIRNTGLDVEPGEARLISSASLLAQDRDTPSSELMYIFESV
PTQGLLQLKEHQGWVTLAAGNNCTQEMVDMNLLRYVNTGRRAANSQDFFVFHLLDGKNES
PSQHFQISIKDLDQGNIVVFVKPANVSRGDRIVLTTDVLLATDGTDKPEELLYTITSPPA
HGHIEYMKHPGLIISTFSQMDIAANLVAYVHDSRASTPKETFQFIVSNGKTSLNGSFEIG
VETVDRILPSLSSNKVLTLPQGASFILGPDYLSLSDPDTPPSTLTFVLSQPPQYGRLVLA
GETLSTGSNFTQRDIEELEVAYKHDGGPSQIDRFSFTGSDSTNRGFLLDGLLHREPVFFT
IQIRPLDKSPPKVVKLLPLWKAERLADGRYGIFLSSQELKARDINSREEELTFCIVRPPH
FGFLENITTGGFVPQRFLQMELNKRSIVYIISLDTESLSDSLEFRVSDLLGNTGPRHVLE
FRWSRVELLQTESSACEEQGTISLDIIRRGNLAVSSYIAVKVNEVTATAGKDFLTNPSAL
VQFDPGVSKRRWQMEIIHDHLEEAEETFEVVLVSPVSTVIGSINKATLTIRDSAGGQCRL
EQNQEAPVLGGQEIQSNTYPQHGSIHLEKLPLGTDSIIWTRGDSISRPGAGLPQKKLRVR
GNAKSIAPSSVFHNGTDTVYTYHGIIQMQVEDDTSPSRKGRKANIQVVSRGAHQRQSEGS
KSHPHRNILTPQKAGVATEHTTAGNPVPKPCVPELRGLLHFNQATNELFHCNGVSWKPWA
PTDQMVSAQMCPQGSTFHGGYCYILSTERKLTWSEANRACRERFKATLASVASKADMDWL
WDFGGRKPFWIGLNDREGGGRWEWAGGEPVGYTNWTKMLPQTKKKESKKCVLVWRRAKWQ
IRDCKTSRGHRFVCSLKI
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atgggttcacctgttcagctcctggcctggatgtgtcttcctctgctcttggttgtgcac
tgtgcatcacatggttcccttgtaaaagtcaacaagggtttaaaagtgaaacgaggccaa
tcggcctaccttcacgtggaggacttgcagttccacattccccatcagaaggattcgtgc
aagttggaggtggtgatgaacgagcccataactcagcgagtaggaaaactgctgcctcag
gtgtttgattgtgattatctggccgatgaagtaaagtatgtccacaacggctgcccgttg
ttgaaagaagacactgtcaagcttcgcctgtacaggttcacagagacagagacatacatg
gaggtcttttccatccatgtagaaattatggagcctgagtgcaccatcattaggttgggg
ccaaaatccctggaggttcctgagttctacagcctctcgaatgctgtggatggaaatgtg
gtctccttccactatgaaaggaggtcaagcttggaatgtagcatccatctgaatagccat
gacacccatctgccaacccacgggcagctggtcacaggggaaccagaggaagccgtcagg
agaggggatgagccggagacattcatccatttgcgtcagcagctggacaacaaagccaga
gcaatgtgtaaatctgaagactgcctgaagggtctgaagctggtgaggtttaccacagtt
tcctgtgaggacttcctggtgatggggctgaggtaccagcacacagaccctccatctcca
caggtagattacatcgcagtcagactggatctgaaggacaccaggagtggcagcatatat
cagtctgaacaggcctggatcccagtgcagatcactggtgcaacgcccaaccagcccccc
aaaccagcctacatgtccatgtttattctggaagtagatcagttcatccttactccgctc
tccactgctacactggatgctgaagacgaagaaactcccaaacagcttttagtgtttaac
atcacgacgcctcctcaggacggcttcatcacccatctgtctgaccacactcgcccagtc
tcctccttcacgtggcttgatctcaacgacatgctcgttggatatcaacctgctaacttc
tcacataaccaacgtaggaactatgaggtggagtttgaagttcatgacttttattttgag
aagagcccgacactaactgttcacatgtctgtgaggactgcagatacaaacgctcccagg
gtgtcctggaacatgggtctcagcctgttagagggtcagtctcgtccaataacgtgggaa
cagcttcagattgtggacaacgacaacctggacgccgttcgtatcataactgtggacggc
ctgcagcatggacggctaacagtcagaggtggaaagggcttcatgtttactgtcaatgac
ataaaagggggagtggtctgctatcaccatgacgacagtgactccaccaaagacttcata
atctttcgcatcactgacggtcatcatcagacccgacacaagttccccatcaagatcctc
cccaaggatgacacgcctccttttcttatcaccaacatgctgctggaggtccctgagggc
cacaccgctctgctgagaggctccatccttcaggcctctgacatggactccagtgatgac
tacatcctctttaacattacccgcccccctcaatcaggggaggttatgaaaattcctgga
ccagggaaaacaggttaccctgtcagccactttctgcagaaggacctgtctcagtcaacg
gtttactatcgtcatcttggacatgaggtgtctgatgattggtttgaggtggtactgtct
gatttccatgacccacccaacctatcagaggctcaggtggtgatggtgcacgtcgagccg
gttccagacaaaccacctaaagaggttccaggttccagtcggtgtcttgtgctgaaagaa
acagacgtagtccacatcacacggcagcagcttcactttgcagacccgcagtcagctgac
agagagctgacgtttactgtgactactccacctttttactctcgtccccaccgcaatccg
gacgcagggaggctgtttctggtcgacagcatacccaaatttaccaaagacgccaacgca
ccaatgctgaaggtcttcactcagcatgcagtaaacttcatgaaagtagcctacatgcct
ccaatcatggacatcggccagtacccccagcaaatccagtttgttctctctgtaaccaac
catctaggtaaaacagtcactgggatctgctttaacatcactgtggagccagtggacaac
cagccgccacaggttgttaccaagcctctgaccgtagatgagggaggggagtgcaggctt
ggccctgaacacgtgctgctgtcggatcaggactcttcagaagaagctctgcgggtggag
ctgcagagggagccacagcatggggctctgcatctcagtggcctcctgatgaaaccagga
caaagcttcactctgcaagatctgaaaagccacaaagttaggtacagtcatgacagctca
gaaactacacaggacaacattgaattcactgcaacagacgggaccagttcagttattttt
gtcttgcaagtgatggtgaagcccatcaatgatgaggtcccagtagtcggtgcaggtttg
aaaccaggtctcagctgtgcagaggggcaggaagtagtcatcaccacagagtacatctat
gccactgatagagacagcgacaacagcagcctgtccttcctaattgtgcagcagccgcat
cacggtgtggtactgagaaaaggtgcagcggtggaccgcttcatccaggcagacatcact
gcagggatcatcacatataaacactcagaagtagagattggactcagtcctcgccatgac
accatcacctttgtcatttctgacggagagacggagacgctggctttatgctgcagtgga
gggagtcccgtcagggtcagcagcactgctcatctgaggcagactctacccgtgtacgac
ctccagatcaccgtgtttcctgttgacagccaaccacctacgctagaaacaccagacatc
tttaaagtgaatgaaggtgggacggccccgattactgcggctcacctgaaagcctctgac
atggacacagtgctggacgagctggtcatcagtctgacctccccgcctcagtttggctac
attgaaaatgtcctccccactcctggttttgagaaaagcaacaccggagtgagcatagct
tctttttcatacaaggacatcatggagggtcatgtcaactatgtgcagtccagacatcag
agggtggagccaacagctgaccacctgatgctctgtgtcacagacggcaaacacagctcc
gcccatgtctctttctacatcattataaaccccacaaatgatgaagccccagagtttgtg
gctcacaacatcacagtacaagagggaaaaatgaagcagctggactcgtctgtcttacat
gcgacggatctggacatccccaagaacgtgttgctctttagtgtggccacaccccctcga
cacggcagcatcatcacccacagcaggggagacagcaagaaacgagagacccagcaccag
cttcctgttgttgcctttactatggcagatcttataaatgatatggatgtgatgtacgtg
cacgatgactctgagagtgcggaggatagtttcaccatgcagctgactgatggacggcac
caagtcctgaaacaggtgatggttaaagtgctgcgagtcaatgatgagaagccccatctt
atcaggaacaccggcctagacgtggagccaggtgaagccagactgatatccagcgcgtca
ctgttggcacaggaccgtgacacgccttcctcagagctcatgtacatttttgaaagcgtc
ccaacccaaggactgcttcagcttaaagaacatcagggctgggtcacactggctgctggg
aacaactgcacccaagaaatggtcgacatgaaccttctacgttatgtgaacacaggccgt
cgtgctgctaacagccaggatttctttgtcttccatttgctggatggaaagaatgaatca
ccctcacagcacttccagatctccatcaaagacctagaccaaggaaacattgttgtcttt
gtgaaaccagcgaacgtcagccgtggagatcgtattgttctcaccaccgatgtgctgcta
gccacagatggcacagacaagccagaggagcttctgtacaccatcaccagtccgcctgct
cacggacacatagagtacatgaaacatcccggcctcatcatttctaccttcagccagatg
gacatagcagccaacctcgtggcttatgtccatgatagccgagccagcactcccaaagaa
accttccagtttattgtgagcaatggtaaaaccagcctaaatggcagctttgagatcggg
gtggaaacggtggatcgtatcttaccatctctgtcctccaacaaagtcctcacgctgccc
cagggagcctcctttatcctgggtccagactacctgtctctgtcagaccctgacactcca
cccagcacgctgacatttgtcctttcacagccgccacagtacggcagactagttttagct
ggtgaaacactgagcacaggttctaatttcacccagagagacatagaggagctggaggtg
gcatataaacacgatggggggccgtcacagatagaccgattctccttcactggctctgac
agcactaatcgagggttcctgctggacgggctgttacacagagagcctgttttcttcaca
attcagatcaggcctttggataagtcgcctcctaaggttgtgaaactgcttcctctctgg
aaagcagagcgtttagctgacggccgatacggcatctttctgtcatcccaagaactgaag
gctcgagacatcaacagcagagaagaagagctcacattctgtatagttcgccctccacac
tttggtttcctagaaaacattaccacaggtggttttgtgccgcagcgcttcttgcagatg
gagctaaacaagagatctattgtatatatcatcagtctggacacggagtctctctcagac
agcctggagttcagagtgtccgatctgctgggaaacacagggcctcgtcacgtactcgag
ttcaggtggtcccgggtggagctgctacagaccgagtcttcagcatgcgaggagcaggga
acgatctcactggacatcattcgtcgggggaatttggccgtatcctcatatattgctgtc
aaggtaaatgaggtcactgcaactgctggaaaggatttcctcacaaacccttctgcactc
gtccagtttgatccaggagtgtcaaagcgaaggtggcaaatggagattattcacgatcac
cttgaggaggctgaggagacatttgaggtggtgctagtctctcctgtaagcacggtcatt
ggcagcatcaacaaagctacgctcaccatcagagactcagcaggagggcagtgcaggcta
gagcagaatcaggaggctcctgttcttggaggacaggagatccagtccaacacgtacccc
cagcatggatccatacacctagagaaacttcctcttgggacagactccatcatctggacg
cgtggagacagcatctccaggccaggagcaggactcccccaaaagaaactcagagtcaga
ggcaatgcaaagtcaattgcaccatcatcagtttttcacaatggaacagacacagtttac
acatatcatggcatcatccaaatgcaagtagaagatgacacctcaccatccaggaagggc
agaaaggcaaacatccaggtggttagcaggggggcacaccagcgtcagtcagaggggtcc
aagtcccatcctcacagaaacatcttaacacctcaaaaagctggcgtggctacggaacat
actacagctggtaaccccgtccccaaaccctgtgtgccagaacttagaggcctgcttcat
tttaaccaagctaccaatgagctctttcactgcaacggtgtctcctggaaaccctgggca
ccaactgatcagatggtgagtgctcagatgtgtcctcagggctccacctttcatggtggt
tattgctacatcctcagtactgaacgcaagctgacgtggagtgaagcaaacagggcctgc
agggaaaggtttaaagcaacactggcaagtgttgcgtctaaagctgacatggactggctg
tgggactttggtggaagaaagcctttctggatcggtctgaacgacagggagggcggaggg
cgctgggagtgggccggaggcgagccggtcggctacaccaactggacaaaaatgcttcct
cagacaaaaaagaaggaaagcaaaaagtgtgttctggtttggaggagggcaaagtggcaa
atcagggactgtaagacgagcagaggtcatcgctttgtctgctcgcttaaaatctga
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integrated database retrieval system
