Oreochromis niloticus (Nile tilapia): 100690313
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Entry
100690313 CDS
T06104
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100690313
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100690313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-B_box
zf-RING_2
zf-RING_5
zf-RING_6
Prok-RING_4
zf-Nse
U-box
zf-RING_10
zf-RING_4
NgoMIV_restric
Motif
Other DBs
NCBI-GeneID:
100690313
NCBI-ProteinID:
XP_003451460
LinkDB
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Position
LG10:complement(23312270..23315111)
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AA seq
547 aa
AA seq
DB search
MAQQVIQLDQEKLSCSICLDLLKDPVTIPCGHNYCMDCIKNYWDENETHSCPQCRETFIP
RPVLVKNTMFADLVEDLKKAGLPAASSDHAFTGPGDVACDFCSGRKRKASKSCLMCMASY
CEQHLQPHYNVAPLKKHKLIEATSKLQDNICTHHDEVMKIFCHTDQQCICYRCLMDEHKD
HVTVLASAERADKQKNLEGNRHKIKYRIQNRERDVNVLKKELEAISLSADKALMESEGMF
KDLISLIEKKTSEVKQKIRSKQKTEQTRVKELQEKLEQEISELRRKDTELEQLSQTEDHI
HFLNNFSSLSHLNKYTDLPSTNGHTLQYFQGVTTAVLQARNKMKDLLSDEWTKILVAVNK
ADVLLPQEEPTTRGEFLKYSCGITVGPETKTKPFSLYGHQSYGNNPENSHVQSNEVLNGP
CYWEVKLTGIATVGVAKKYDSYSGSSDKRGLGSDYESWALKYSHGSYQFRHGNISTSLSG
PKSSTVGVYLDRRAGILSFYSITETMNLPHRVQTTFTKPLYAGFWLPDSSSNSLELCELK
ETSDTES
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaagtgattcagctggatcaagaaaaactgagctgttccatctgtctggat
ctcttgaaggatccagtcactattccctgtgggcacaactactgcatggactgtatcaaa
aactactgggatgagaatgaaacacacagctgcccccagtgcagagaaactttcatacca
agacctgtcctggtgaaaaacaccatgtttgctgatttagtggaggacctaaagaaagca
ggacttccagctgcttcgtctgatcatgcctttactggacctggagatgtggcctgtgat
ttctgttctgggaggaagcggaaagcctccaagtcctgcctgatgtgtatggcctcttac
tgtgaacagcaccttcagcctcactacaacgtagctccattaaagaaacacaagctcatc
gaagccacttcaaaacttcaggacaacatctgcactcaccatgatgaggtgatgaagatc
ttctgtcacactgatcagcagtgtatctgttatcgctgcttaatggatgaacacaaagac
cacgtcacagtgttagcttcagcagaaagagctgacaagcagaaaaatctagaagggaat
cgacacaagatcaagtacagaatccaaaacagagagagggatgtgaacgtgcttaagaag
gaactggaggccatcagtctttctgctgataaagctttgatggaaagtgaggggatgttc
aaagacttgatcagtctgattgagaaaaaaacctctgaggtgaagcagaagatcagatcc
aagcagaaaactgaacagactcgagtcaaagagcttcaggagaagctagagcaggagatc
agtgagttgaggaggaaagacactgaactggagcagctctcacaaacagaggatcatatc
cattttcttaataatttttcctcactgtcacatttgaataaatatacagatttaccgagc
accaacggccacactctccaatactttcaaggtgtgaccacggctgtattacaggccaga
aataaaatgaaggatcttctgagtgatgaatggacaaaaattttagttgcagtgaataaa
gcagatgtgctactgcctcaagaagaacccacaactagaggggaatttttgaaatattct
tgtggcatcactgttggtccagagacgaaaacaaagcctttctcactgtatggacatcag
tcatatggaaataaccctgaaaactcgcatgtccagagtaatgaggttctgaatggacct
tgctactgggaggtaaagttgactggtatagcaacagtaggtgttgcaaagaagtatgac
tcctatagtgggtcaagtgataaacgtggattgggatcagattatgagtcttgggcatta
aaatattcacatggcagttatcaattcagacatggaaacatttcaacttccctctcaggc
cctaagtcttccacagtgggagtatatttggatcgcagggcaggtattctgtctttttac
agcatcactgagaccatgaatctcccccacagagtccagaccaccttcactaagcctctc
tatgctggattttggcttccagatagttcttcaaactctcttgaattgtgtgagttgaag
gagacaagtgatactgaatcatga
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