Oreochromis niloticus (Nile tilapia): 100692062
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Entry
100692062 CDS
T06104
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
onl01002
]
100692062 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100692062 (usp47)
Enzymes [BR:
onl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100692062 (usp47)
Peptidases and inhibitors [BR:
onl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100692062 (usp47)
Ubiquitin system [BR:
onl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100692062 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
100692062
NCBI-ProteinID:
XP_005467081
Ensembl:
ENSONIG00000005970
UniProt:
A0A669D175
LinkDB
All DBs
Position
LG1:complement(20961739..20982463)
Genome browser
AA seq
1364 aa
AA seq
DB search
MEMVPSEENQFVPKEIQNAAEEPRALCIIQDITSAKTVNERLTLNLPASTTLSKLYEDVA
HKAGYVNGTFGLAWGNTQDMAPLDHSSEMSLSESGFEPGGKRNFLQLTDKDGEQPQIASD
ESGTADSSGLDDSSQERFIGPLLRDGTPGYSGDYSSPSYSYSSILSKSETGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEEQEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARK
GLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSTERVLKPKSLLTFELFSVMVHSGS
AAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSGAFASSTNAYM
LIYRLKDPSRNAKFLAVEDFPEHIKRLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVK
MMMESKLEVHKDKTLREATEMAYKMMELEGVVPLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKVHVVDLKSETIASPVSVRAYLN
QTITEFKQLIAQAAGLSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSEL
TDHQVPFTDSLLWKLLDRHGNTIRLLVLLPEQSPGTLANRTLFQKVGSESDVLSEGSKGN
RKSVEAILEESTEKLKNLSLQQQQGSSTSDSQKSSDASDFEHIESPTQEADSNSSLCVAA
DNRELENRIRATSAGSGGASSDPENHFACEERSDSEVNNDRSTSSVDSDILSSSHSSDTL
CNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKAEAQY
LYFRAEPCSQDDASWDSQKCLVVHVDKRITLAAFKLNLEPYVGVTSTQFKVFRVYANNQE
FESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLVDTVFAKGMT
VRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVFLE
VLDEPEKMKSMSQLAVLTRRWSPSTMKLGPFQEVILESSSVEELKEKLSEISGIPLENLE
FAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSTEEPLELSEDE
RNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPGQD
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagagatccaaaatgcagcc
gaggagcccagagcgctgtgtataattcaggacatcaccagcgcgaagacggtgaacgaa
cggctgactctcaacctgcctgcttccaccaccctctccaaactttatgaagatgtcgct
cacaaagcaggatatgtaaatggcacttttggacttgcatggggaaatacgcaagacatg
gcaccgcttgaccatagtagtgagatgtccctctcagagtctgggtttgaacctggtggt
aagaggaatttcctccagcttacagataaagatggagagcagccccagattgcatctgat
gagtcaggaacagcagatagcagtggactagatgacagttcccaggaacgatttattgga
cccctactgagagatgggactcctggctacagtggtgactacagcagtccatcttactct
tactcgtccatccttagcaaatctgagacgggttatgtgggcttggtcaaccaagcgatg
acttgctatttgaacagtctgctgcaaacattgttcatgaccccagagtttaggaatgca
ctctacaattgggagtttgaggagcaggaggaggatcctgtcaccagtattccctaccag
ctgcaaagactgtttgttctgttgcaaactagtaagaaacgggcaattgagactactgat
gtgacgcgaagctttggctgggacagcagtgaggcttggcaacaacatgacgtccaggag
ctgtgcagggtcatgttcgatgccctagagcagaagtggaagcaaacagagcaggctgac
ctgatcaaccagttgtaccagggaaagctgaaggattatgtccgttgtctggagtgtggc
tatgagagctggaggattgatacttacctggacatccctcttgtgatcagaccctttgga
gccagccaagcctatggcagtgtggaggaagcattacaggcattcatacaaccagaaaca
ctcgatgggcccaaccagtatttctgtgaacgctgtaaaaagaaatgtgatgcccgtaag
gggctgagatttctgcactttccttatctgctgacgttacagttgaaaaggtttgatttt
gactacaccactatgcatcgcatcaaacttaatgaccgcatgaccttcccagaggaactt
gacatgagtccattcattgatgtggaagatgagaagtcccctcagaccgagagctgcact
gacagcggagcagagaatgaaggcagttgccacagcgaccagatgagcaacgatttttcc
accgatgattgtgtggatgagggcatctgcttggacagcaccagcagcacagagagggtg
ttgaagccaaagagtttgctgacctttgagctgttttctgttatggtccattctgggagc
gctgcgggcgggcactattatgcctgtatcaagtccttcagtgatggccagtggtacagt
ttcaacgatcagcacgttagcaagatcacccaggatgatatcaggaaaacatatggggga
tcctcagggagcagaggctattactccggtgcctttgcaagctccacaaacgcatatatg
ctgatttatagactgaaagatccttcaaggaatgcaaagtttttagccgtggaggacttc
ccagagcacataaagcgtttggttcagaaggagaaagagtctgaagagcaagaaaagaga
cagagggagattgaacgcaacacttgcaagatcaagctcttctgcatgcatcctgtgaag
atgatgatggagagcaagttggaagtgcacaaagacaaaactctcagagaagcaacagaa
atggcctacaagatgatggagcttgagggagtcgtccctctggactgctgtcgcttggta
aaatatgatgagttccatgagtacctggagcgctcttatgaaggcgaggaggacacacca
atgggcctcctccttggaggagtcaagtcttcatacatgtttgacttgcttctagaaacc
cgcaggccagatcaagtgttccagccttacaaacctggagaggtgatggtgaaggttcat
gttgttgatctgaagagtgagaccatcgcgtctcccgtcagcgttcgggcgtacttgaac
cagacgatcactgaattcaaacagcttattgcacaggctgcagggctttctgcagagacc
atgcgtgtggttctggagcgctgctataatgacctccggcttctctatgtcccaaacaag
acactgaaagctgagggattcttcaggagcaacaaggtttttgttgagagctctgagttg
accgatcatcaggttcctttcactgactcactcttgtggaaactgttggatcgacacggg
aatacgatccggctgttagtcttactaccagagcagtctcctggtaccttggcaaacaga
actcttttccaaaaagtaggaagtgagtctgatgtgctctctgaggggtcaaaaggtaac
aggaaatctgtagaggctatcctggaggagagcacagaaaagttaaagaatctgtctctg
cagcagcagcagggctccagcaccagtgacagccagaaaagctctgacgccagcgacttt
gaacatatcgaatccccaacccaagaggcggactcaaactcttctctctgcgtggctgca
gacaacagagagttagagaatcggatcagggccacgtctgcgggtagcggcggcgcctcc
tctgacccagagaaccactttgcctgtgaggagcggtcggactcagaagtgaacaatgac
cgcagcaccagctcagtggacagtgacatcctgagctccagtcacagcagtgacacgctg
tgtaacgcagacagcggcccaatccagctggccaatggcctggactcgcacagcatcacg
agtagccgacgctccaaagcccatgagggcaaaaaagagacctgggacactgcagaagaa
gactctggaactgacagcgaatatgacgacaatggaaagagcaaggcagaggcccagtac
ctgtacttcagagcagagccttgttctcaggatgatgcctcatgggattcacaaaaatgt
ttggtggttcatgtggacaagagaataacattagcagcatttaagctgaacttggagccc
tacgtcggcgtcacctcgacccagttcaaggtgtttagggtgtatgccaacaaccaggag
tttgagagtgtacggctcaacgagacactctcatcgttctctgacgataataagataacc
attcgactaggcagagcccttaaaaagggtgaatacagagtgaaagtgtatcaactacta
gtcaatgaaccagagccctgcaagttcctagtggacacggtgtttgccaagggcatgact
gtcagacagtctaaagaggagctgcttcctcagttaaaagagcagtgtaaacttgacctc
agcattgacagggttcgcctcaggaaaaagacgtggaagaatccgggcacagtgtttttg
gattaccacgtttatgaggaagacatcagcatttcgtccaactgggaggttttccttgaa
gtccttgatgaaccagagaagatgaagtcaatgtcacagttggccgttctgactcggaga
tggagcccatctacgatgaagctggggccttttcaggaagtgattctggagagcagcagt
gtggaggaactcaaggagaagcttagtgaaatcagtggtattccattggaaaacctggag
tttgcaaagggtaggggaacgtttccttgtgatatttctgtgttggaaatccatcaggat
ttagactggaaccccaaggtgtcgacccttaatgtgtggcctctttacatctgtgatgat
ggagcggtggtcttctacagggacagcacagaagaacctctggagttgtcagaggatgag
cgcaatgagctaatgaagaaggaaagcagccgtctgcttaaaaccggacatcgtgtcagt
tactcgccgcgcaaagagaaggccctcaagatctacctggacggcggccctgccaaggac
ccagggcaggactga
DBGET
integrated database retrieval system
