Oreochromis niloticus (Nile tilapia): 100692969
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Entry
100692969 CDS
T06104
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100692969
Spliceosome [BR:
onl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100692969
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100692969
NCBI-ProteinID:
XP_005468512
Ensembl:
ENSONIG00000008341
UniProt:
A0A669DKU5
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All DBs
Position
LG4:complement(9133023..9186284)
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AA seq
462 aa
AA seq
DB search
MLMSTDVASIMLPVSRGIMDRERDIDTAAGPHANAAGGPAVVRGMKRGDPEPDAQTAAAL
TDLSGAECKRPRIDGTGSVVGDIGQNNEPLNPGFHGYQPHSQGSQDSTGGQEGLVAPPFT
AFPPPPPPQNGLPGTEFGPGAMFGAGGQGTAEVGAGANGAPTSTNNNSSNVKTEETSQGE
AGVQCGAGGTGAGGSAGDSTEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFENSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEA
LSTLPYAGWKLSPVVGAMYGPEIYAVPGFPYPTAAAAATTAAAAFRGAHLRGRGRPVYSA
VRAAVPQPAIPAYPGVVYQDGFYGAADLYGGYPAAAAAAAAYRYAQPAAVTGATAAAAAY
SDSYGRVYTTDPYHALAPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctattatgctacccgttagtcggggaataatggac
cgggaaagggacattgatacagcagccggaccccatgcaaacgcggccgggggtccagcc
gtggtccgagggatgaagagaggcgatccggagcccgacgctcagactgccgctgccctc
actgacttgtccggggcggagtgcaaaagaccaaggatagacgggaccgggagtgttgtt
ggtgacattggccagaacaatgagcctttaaatcccggtttccatggataccaacctcac
agtcagggctctcaggattcgacaggaggacaggagggtttggtggccccaccctttaca
gcattccctcctccaccccctcctcaaaacggtctaccgggaacagagtttggccctggg
gccatgtttggtgctggaggccaaggtacagcagaggtaggggctggtgcaaatggagcc
cccacctccaccaacaacaacagcagcaatgtaaagacagaggagacgtctcagggtgag
gcgggtgtacagtgcggcgcaggaggcacaggagcgggaggctcagcaggagactcgaca
gaggccaaagggacccccaaacgcctccatgtctcaaacatccccttccgcttccgggac
ccagacctcaggcagatgttcgggcaatttgggaagatcctggatgttgagattattttc
aatgagaggggttcaaagggttttggctttgtgacatttgagaacagcgcagacgcagag
aaagccagggaaaagctccacggcacactggtggaaggtcgtaagattgaggtgaataac
gccaccgccagagtgatgactaacaagaagatggtcagcccttatcctaatggagaagct
ctcagcacactaccctatgcagggtggaagttgagtccagtggtgggagctatgtatgga
ccagagatctacgcagttccagggtttccctaccctacagcagcagcagcagccacaaca
gcggcggcggcatttcgcggtgcccacctccggggccgaggccggcccgtctacagtgct
gtgcgggccgctgtgccgcagcccgccatccctgcctatcctggcgtggtgtatcaggat
gggttttacggagccgcagacttatatggaggctacccggctgctgccgccgccgccgcc
gcctatcgctacgcccagcctgcggctgtaaccggggcaaccgctgcagctgctgcctac
agtgacagttatggccgggtgtacactacagatccataccacgctttagctccggcggct
gctgcttacggcgtgggagccatggccagtttataccgggcgggatacagtaggtttgct
ccttactaa
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