Oreochromis niloticus (Nile tilapia): 100696697
Help
Entry
100696697 CDS
T06104
Symbol
srf
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100696697 (srf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100696697 (srf)
Transcription factors [BR:
onl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
100696697 (srf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
100696697
NCBI-ProteinID:
XP_005473952
Ensembl:
ENSONIG00000010161
UniProt:
I3JV85
LinkDB
All DBs
Position
LG13:24482220..24507057
Genome browser
AA seq
597 aa
AA seq
DB search
MLPSQVGSAPSGNGSGSGRGTTQHGSGLVGSGIRPVLVRSGQALPGVSESTGAAGRQGDR
DTIGMLGANGPGGPRGARPGNGTGVNPLQTSVQSSMVGLSPGVMLPHGARFDPDRESAPL
CSGSDNDSDSGDDDEPVGSLGDSRRGVKRERGEMEAAVSGQEVGVSPGGYSMVPGGVAGA
KPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESE
SMGDTKDTLKPTFTVATLPGSASSAQSTVPTTSTTMQVSSGSSFPITNYLAPVSANSNIS
ANGTVLKTASASTGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQALAV
TPQPQQGQQAVFRFPAAVSLTGPGVPQQLQAIQVHPNAQPTSNSDSSPEISHTSTNSTAT
VSLPATIVTSSVPTSVAGHMMYPSPHTVMYASTPALADGGLAVLNAFSQGTSAMQVSHAQ
AQDTGGVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNSTELKE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaggttggatcggcaccatctggaaacggctcgggttcaggcaggggt
acaacacaacacggctcggggttggtcggcagcgggattcgtcccgttcttgtcagatca
gggcaagctctaccgggggtcagcgagagtaccggtgctgcagggcgacagggggacaga
gataccattgggatgctgggagctaatggtccagggggtccgagaggtgcgaggccgggg
aacgggaccggtgtaaaccctcttcagacttccgttcaaagcagcatggtgggcttaagt
ccaggagtcatgttgcctcacggagcccgcttcgatccggaccgggagagtgcgcctctg
tgcagcggctcagataacgactcggactccggagatgatgacgaacccgtgggttcactt
ggggacagcaggagaggggtgaagcgggagagaggggagatggaggctgcggtgtcggga
caggaggtaggagtatcgcccggaggttacagcatggtgcccggaggggtcgccggggca
aaaccgggcaagaagacacgtggacgcgtaaagataaagatggaatttattgacaacaag
ctgagacggtacaccacattcagcaagaggaagacgggcataatgaagaaggcctatgaa
ctctccaccctgacgggaacccaggttctgctactcgtggccagcgaaacgggtcacgtg
tacacttttgctactcgcaaactccagcccatgatcaccagtgaaacgggcaaagccttg
atccagacatgcctcaactcgccagactctccgccgcgctccgacccgtccacagatcag
cgcatgagcgccaccgggtttgaggagactgacctcacctaccaggtgtcggagtcggag
agcatgggcgacacaaaggacaccctgaagccgacattcacagtagcgaccctgccaggc
tcggccagcagcgcccagtccacagtacccaccacctccaccaccatgcaggtgagcagc
ggatcttcgtttcccatcaccaactacctggcccccgtctcggccaacagcaacatcagt
gccaacgggactgtcctcaagactgccagcgcctccacgggggtcatgcagctgcccggc
ggcttcacgttcatgcccgcaggcactcctctccctcctggtacccccaccattcctctg
agtcagttgcaacagcactccttggccctccaggggcagcatggtcaggccctggccgtc
accccacagccacagcagggacagcaggctgtcttccgcttccctgctgctgtctccctc
acaggcccaggggtaccccagcagctccaagctatccaggtccatcctaacgcccagccc
acctccaacagtgacagcagccctgagatctcccatacctctacaaactccaccgccacg
gtaagtctcccagcaaccattgtcacttcgtcagtgccaacgtctgtggcaggtcacatg
atgtaccccagcccgcacacagtgatgtacgcctccacgcccgcgctggcagacggcggg
ctggctgtgctcaacgccttctcccaggggacctcggcaatgcaggtgtcccacgcacaa
gcccaagacacaggtggtgtccctcaggtgttcctcacagcacctccaggcacggtgcag
atccctgtctcagcagtgcagctacacccaatggtgattggccagcagtcgagcggcagc
agcagtaacctgacggagctccaggtggtgaacagcacagaactcaaagagtga
DBGET
integrated database retrieval system
