Oreochromis niloticus (Nile tilapia): 100696970
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Entry
100696970 CDS
T06104
Symbol
rangap1
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100696970 (rangap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100696970 (rangap1)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100696970 (rangap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_8
CDC45
Nop14
SDA1_dom
Merozoite_SPAM
MctB
Myc_N
PI3K_1B_p101
BUD22
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
100696970
NCBI-ProteinID:
XP_003443169
Ensembl:
ENSONIG00000008468
LinkDB
All DBs
Position
LG4:9341258..9349667
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AA seq
579 aa
AA seq
DB search
MATDDVAQLADSLAKTGVEDGELSYKGQGRKLDDAQSVEEMVKEIQDFEGLQALRLEGNT
VGVEAARAIAKALETKSALKRCYWSDMFTGRLRSEIPPALNSLGDALMLAGARLTVLDLS
DNAFGPDGVKGIENLLKSSTCYTLQELRLNNCGMGIGGGKILAAALIYNHKKSSAEGSPF
SLKVFVAGRNRLENDGATALAQAFKLIGSMEEVHMPQNGINHAGVTALAEAMQHNPGLRI
LNLNDNTFTEKGAIAMAQALKHLRSIQVINFGDCLVRPEGAKAIAASVSEGLPILKELNL
SYGEITEDAALVVAQAVKDKDQLEKLDLNGNCIGEDGCRALKVAMEAMNMSELLGSLSDD
EGEPEDDDDDDEDEDDDEEEDDDEEDVDEEEVEEEEEEEEEEESTGNKFSTPQSAPRPPE
VSSFLSFPSPDKLLKLGPTRALLIEQQVDVSDAAKTAEAFLKIASVYKEDNNEVKNAVLD
SIDGLLRKAFTSSSFQGYSFVSSLLVLLGLIKSEDKVKPVIVVPGHLQALEHVVRQDYFP
KESVAVLEAFMSRNNKTLEPCGNAKNNLQSTLQRVRSQS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacgacgttgcgcagttggctgactctctggccaaaactggagtggaggat
ggagagctcagttacaaaggacagggaagaaagctggatgatgctcagtcagttgaggag
atggtgaaggagatccaggactttgagggtttacaggctctgaggttggagggaaacact
gtaggtgtggaggcagcacgggccatcgctaaggccctggagacaaagagtgcattgaag
cgttgctactggagtgacatgtttacaggtcgcctgcgctctgagatcccacctgccctg
aattcactgggtgatgctctgatgctggcgggtgccaggctcacagttttagacctcagc
gacaatgcttttggacccgatggagtaaagggcattgagaatctgctaaagagctccacc
tgctacacactgcaggagctacggctcaacaactgtggcatgggcatcggaggtggcaag
attttagctgcagcattgatctacaatcataaaaaatccagcgctgaaggatcgcccttc
agcctgaaggtgtttgttgcaggaagaaaccgactggagaatgatggagccactgccctc
gctcaggcttttaagcttataggcagcatggaggaggttcacatgccccagaatggcatc
aaccacgcaggtgtgaccgccctggccgaagccatgcagcacaatccaggacttcgaatc
ctcaatctgaatgacaacacgttcactgagaagggggctatcgccatggctcaggccttg
aaacacttgcggagcatccaggtgataaactttggagactgtttggtacgaccggaagga
gccaaagcgattgcagcgagcgtgtcagaggggctgccgatcctcaaggagcttaatctg
tcgtacggtgagattactgaggatgctgctctggtcgtggcacaggcagtaaaagacaag
gaccaactggagaaactggacctaaatggtaactgcattggagaggatggctgcagagct
ttgaaagtcgccatggaagccatgaacatgagcgagctacttggatcactcagtgacgat
gagggcgagccagaagatgatgatgatgacgatgaagacgaagacgacgatgaggaagaa
gatgatgacgaggaggatgtggacgaggaggaagtagaggaggaagaggaagaagaggag
gaagaggaaagcactggcaataagttttccaccccacagtcagcacctcgacccccagaa
gtctcctccttcctcagctttccctcccctgacaaactgcttaaactgggccccacgaga
gcattgcttattgagcagcaggtggatgtttcagacgctgcaaaaacagctgaagccttc
ctcaagattgcatctgtgtacaaggaggacaataatgaagttaagaatgcagtgttggac
agtattgatggcctcctgaggaaagctttcacctcctcttccttccaaggctacagcttt
gtatcatctttgttagtgctgcttggacttattaagagcgaggataaggtgaaacctgtg
attgtggtccccggccacctccaagctttggagcatgtcgttcgacaggactacttcccc
aaagagagcgtggctgtgctggaggccttcatgtcccggaataacaagaccttggagcca
tgtgggaatgctaaaaacaatctccaatcaacactgcagagagtccggtctcagagctga
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