Oreochromis niloticus (Nile tilapia): 100697702
Help
Entry
100697702 CDS
T06104
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
onl
Oreochromis niloticus (Nile tilapia)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
100697702
NCBI-ProteinID:
XP_003450005
Ensembl:
ENSONIG00000016288
UniProt:
I3KHB1
LinkDB
All DBs
Position
LG6:complement(30042163..30060402)
Genome browser
AA seq
570 aa
AA seq
DB search
MSSTLGKDKETKEKDPKGGPAGLVKDGGKDPKTKGKDAKEGKKDTSSSTPGVAFSVDNTI
KRPNPATGTRKKSSNAEVIKELNKCREENSTRLDLSKRSIHTLPTSIKELTQLTELYLYS
NKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREIPPVVYRLT
SLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCSLITLDVAHNQLEH
LPKEIGHCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAQCRELEEL
NLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPF
GIFSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLTKIPEDICGLASLEVLIL
SNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNNQLTMLPRGIGH
LLNLTHLGLGENQLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCP
LTHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggtaaagataaagaaacgaaagaaaaggaccccaaaggtggtccg
gccggcttagtgaaggatgggggcaaagacccgaagaccaaagggaaagatgccaaagaa
ggaaagaaggacaccagcagctcaacaccaggtgttgccttctccgttgacaatacgata
aagcggccaaacccggcaacaggtacacgcaagaagtccagtaatgcagaggtgatcaaa
gagcttaacaaatgtcgggaggagaattcgacgagactggatctgtccaagcggtccatt
cacactctgcccacttccattaaggagttgacacagttgactgaactctacctatacagc
aataagctgcagagcctgccagctgaggtgggttgcctatcaggcctggtcactttggcc
ctcagtgagaactcactgaccagtttgcctgactccctggactccctgaagaagcttcga
atgcttgacctccgacataacaagctaagagagataccaccagtcgtctatcgcttgaca
tctttgacaacgctgtacttgcgcttcaatcgcattacaacagtggagaaggacatccga
aacctatccaagctcaccatgctcagcattcgtgagaacaagatcaaacagctacccgct
gagataggggagctatgcagcctcattactctggacgttgcccataaccagttggaacac
ctaccgaaggagattggacattgcacacagataaccaacctcgacttgcagcacaatgag
ctcttggacctcccagagactataggaaacttggcaagcataaatcgcttaggtctgagg
tacaatagattgtcagctattcccagatctttagcgcaatgtcgagaactggaggagcta
aatcttgaaaacaacaacatttcagtgttgccagagggtctgctgtcaagtttggtcaat
ctgacgagtttaacactggcaagaaactgcttccagtcgtaccctgtgggtgggccatcc
cagttctcaaccatttactctctcaacatggagcacaaccgtatcaacaagatccccttt
ggcatcttctccagggcaaaagtgttaagcaagcttaacatgaaggacaaccagttaaca
gcactgcctttggattttggtacatggactagcatggttgaacttaacctggccaccaat
cagctgactaagatcccagaggacatctgtggtcttgcttctctggaggtgttaatattg
tccaataatcttctcaagaagttaccacatggtattgggaatttgagaaagttaagggag
cttgacttggaggaaaacaagttggaatgtctacctaatgaaatcgcttatcttaaagat
ttacagaaactggtgttgacaaataatcagctgactatgttacccagaggaatcggccac
ctcctcaacctgactcatctgggtttgggggagaaccagctgcaacaccttcctgaggag
attggcacactggagaatttggaggaactgtacctcaacgacaaccccaacctgcacagc
cttccatttgagctggccctctgcagtaaactgtccatcatgagcatagagaactgtccc
ctcacccacctgccaccccagattgtcgcaggaggcccttccttcatcattcagttcctc
aagatgcagggaccataccgtgccatggtctga
DBGET
integrated database retrieval system
