Oreochromis niloticus (Nile tilapia): 100711086
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Entry
100711086 CDS
T06104
Symbol
trim62
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100711086 (trim62)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100711086 (trim62)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100711086 (trim62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
CorA
zf-RING_5
zf-RING_10
KxDL
Phasin
Fib_alpha
U-box
Spc24
AAA_13
Snapin_Pallidin
zf-Nse
DUF6872
PilJ
DUF1664
DUF4795
Motif
Other DBs
NCBI-GeneID:
100711086
NCBI-ProteinID:
XP_003459625
Ensembl:
ENSONIG00000004073
UniProt:
I3J8E3
LinkDB
All DBs
Position
LG5:complement(18305067..18339853)
Genome browser
AA seq
475 aa
AA seq
DB search
MACSLKDELLCSICLSIYQDPVSFGCEHYFCRKCITEHWSRQEPHGTRDCPECRRTFADP
LLSPSLKLSNIVERYSAFPLDAILNAQRSSYPCKDHEKVKLFCLTDKSLVCFFCDEPALH
EQHQVTTIDEAYEEIQREMKEQLATLQDSERGHTEALQLLQRQLTETKSSAKSLRATIGD
AFERLHRFLRERQKSMLEELEMDTARKLSDIEHKIQRYSQQLRDVKEGIQILQERLNETG
RHDFLEGVAVTSERIKGKIHETNLTYEDFPTSKYMGPLQYTIWKSLFQDISPVPAALTLD
PITAHQRLILSDDCTIVAYGNLHPQPLQDSPRRFDVEVSVLGAEGFSSGVHYWEVMVSEK
TQWMIGVANETVSRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVKSKLEKVGVFL
DYPKGLLIFYNADDMSWLYTYREKFPPKVFPYFSPGQSHANGKNVQPLRINTVRL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctctctgaaggacgagctcctgtgttccatctgcctcagcatctaccaggac
cccgtcagcttcggctgcgagcactacttctgcagaaagtgcatcaccgagcactggagc
agacaggagcctcacggaacacgggactgtcccgagtgccggaggaccttcgccgatcca
ctcctttcgccaagtctcaagctgtccaacattgtggagcgctactcagccttccccctg
gacgccatccttaacgcgcagaggagctcctacccctgcaaggaccacgagaaggtcaag
ctcttctgcctcaccgacaaaagcctcgtgtgtttcttctgcgacgagccggcgctacac
gagcagcaccaagtaaccactatcgacgaggcttacgaggaaatacagagggagatgaag
gagcagctggccaccctgcaggacagtgagaggggacacactgaggccctgcagctcttg
cagagacaactcactgagaccaagtcctcggccaagagtctgcgggcaactatcggtgac
gcatttgagcgccttcatcgattcctgcgtgagcgtcagaagagcatgctggaggagctg
gagatggacacggcccgcaagctgtccgacattgagcacaagatccagcgctacagtcaa
cagctgagagatgtcaaggagggcatccagatattgcaggagcgcctcaacgagacaggg
cgacacgacttcctggagggtgtagcagtcacatctgagaggatcaaggggaagattcat
gagaccaacctaacgtatgaggacttcccgacatcaaagtacatgggccctttacagtat
acaatatggaaatcactcttccaggacatttcaccagtgccagcagctttgaccctcgac
cccatcacagcccaccaaagactgattctctcagacgactgcaccattgtggcctacggg
aatctccatccacagcctctgcaggactcccctcggcgctttgatgtcgaggtgtccgtt
ctgggtgcagagggcttttcgtctggcgttcattactgggaggtgatggtgtcggagaag
acgcagtggatgatcggcgtggccaacgagacagtcagtcgcaaaggcagcatccaaatc
cagccgagccgcggcttctactgcatcgttatgcacgacgggaaccagtacagcgcctgc
actgagccctggacccgtctcaatgtcaagagcaagctggagaaggtgggggtgttcctg
gactaccccaaaggcctgctcatcttctacaacgcagatgacatgtcttggctctacacc
taccgagagaaattcccccccaaggtcttcccctacttcagccctggccagagtcacgct
aatggcaagaatgtgcagccactgcgaatcaacactgtacgcctttaa
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integrated database retrieval system
